RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 WDR19Q8NEZ3 1342 aa0.61□□□□□ -2.31
SMAD1-203ENST00000502342 NCKAP5O14513 1909 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 IGHV2-26A0A0B4J1V2 119 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 NCF1BA6NI72 391 aaPredicted RBP0.6□□□□□ -2.31
SMAD1-203ENST00000502342 NCF1CA8MVU1 366 aaPredicted RBP0.6□□□□□ -2.31
SMAD1-203ENST00000502342 RNASEK-C17orf49H0YIS7 233 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 SOX14O95416 240 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 CRYGDP07320 174 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 STAG3L3P0CL85 134 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 ZNF3P17036 446 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 TUBG1P23258 451 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 CBX5P45973 191 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 CLDN8P56748 225 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 OR2B6P58173 313 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 DAOAP59103 153 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 HTR4Q13639 388 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 VN1R4Q7Z5H5 301 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 TMCO2Q7Z6W1 182 aaPredicted RBP0.6□□□□□ -2.31
SMAD1-203ENST00000502342 GAPTQ8N292 157 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 DRAXINQ8NBI3 349 aaPredicted RBP0.6□□□□□ -2.31
SMAD1-203ENST00000502342 DOK4Q8TEW6 326 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 UTP23Q9BRU9 249 aaKnown RBP0.6□□□□□ -2.31
SMAD1-203ENST00000502342 RGCCQ9H4X1 137 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 ACOT13Q9NPJ3 140 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 TUBG2Q9NRH3 451 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 SDHAF2Q9NX18 166 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 MINOS1-NBL1R4GNA1 71 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 V9GYY9 64 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 NYNRINQ9P2P1 1898 aaKnown RBP0.6□□□□□ -2.31
SMAD1-203ENST00000502342 COL18A1P39060 1754 aa0.6□□□□□ -2.31
SMAD1-203ENST00000502342 YLPM1P49750 1951 aaKnown RBP0.59□□□□□ -2.31
SMAD1-203ENST00000502342 ZNF638Q14966 1978 aaKnown RBP0.59□□□□□ -2.31
SMAD1-203ENST00000502342 CRB1P82279 1406 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 SDK1Q7Z5N4 2213 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 TRGV2A0A075B6R0 118 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 A0A0G2JQZ4 141 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 A0A1B0GTQ1 180 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 A0A1B0GXF2 115 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 TRIM64CA6NLI5 447 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 NAPSAO96009 420 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 CA2P00918 260 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 OR4A8P0C604 315 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 SLC2A1P11166 492 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 SPAM1P38567 509 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 PEX19P40855 299 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 HINT1P49773 126 aaPredicted RBP0.59□□□□□ -2.31
SMAD1-203ENST00000502342 PLTPP55058 493 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 RWDD2BP57060 319 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 STX4Q12846 297 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 OR8G1Q15617 311 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 SSX7Q7RTT5 188 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 OLIG3Q7RTU3 272 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 C10orf126Q8N4M7 172 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 OR51L1Q8NGJ5 315 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 CD200R1Q8TD46 325 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 FAM131CQ96AQ9 280 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 KIAA1143Q96AT1 154 aaPredicted RBP0.59□□□□□ -2.31
SMAD1-203ENST00000502342 GLT1D1Q96MS3 346 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 HSPB9Q9BQS6 159 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 SPZ1Q9BXG8 430 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 HEY1Q9Y5J3 304 aa0.59□□□□□ -2.31
SMAD1-203ENST00000502342 ARHGAP32A7KAX9 2087 aa0.59□□□□□ -2.32
SMAD1-203ENST00000502342 COL6A6A6NMZ7 2263 aa0.59□□□□□ -2.32
SMAD1-203ENST00000502342 USP42Q9H9J4 1324 aaKnown RBP0.59□□□□□ -2.32
SMAD1-203ENST00000502342 ARAP3Q8WWN8 1544 aa0.59□□□□□ -2.32
SMAD1-203ENST00000502342 RTEL1-TNFRSF6BF6WH68 1400 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 MUC21A0A0G2JKD1 596 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 MUC21A0A140T8X8 626 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 K7EN84 100 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 TCF21O43680 179 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 IGKV5-2P06315 115 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 NQO1P15559 274 aaKnown RBP0.58□□□□□ -2.32
SMAD1-203ENST00000502342 CD36P16671 472 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 PRKACAP17612 351 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 CPN2P22792 545 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 GABRA3P34903 492 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 HSPA13P48723 471 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 KRTAP10-4P60372 401 aaPredicted RBP0.58□□□□□ -2.32
SMAD1-203ENST00000502342 DSTNP60981 165 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 RHOAP61586 193 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 ZNF117Q03924 483 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 RESP18Q5W5W9 173 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 FAM184AQ8NB25 1140 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 GATD1Q8NB37 220 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 ZNRF2Q8NHG8 242 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 CDKL2Q92772 493 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 PEX13Q92968 403 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 TMBIM1Q969X1 311 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 CLDN23Q96B33 292 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 MRPS24Q96EL2 167 aaKnown RBP0.58□□□□□ -2.32
SMAD1-203ENST00000502342 ZNF396Q96N95 335 aaPredicted RBP0.58□□□□□ -2.32
SMAD1-203ENST00000502342 MYCBPQ99417 103 aaPredicted RBP0.58□□□□□ -2.32
SMAD1-203ENST00000502342 NAA38Q9BRA0 125 aaKnown RBP0.58□□□□□ -2.32
SMAD1-203ENST00000502342 CHID1Q9BWS9 393 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 POTEKPQ9BYX7 375 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 ALX4Q9H161 411 aaPredicted RBP0.58□□□□□ -2.32
SMAD1-203ENST00000502342 VCX3AQ9NNX9 186 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 WASHC3Q9Y3C0 194 aa0.58□□□□□ -2.32
SMAD1-203ENST00000502342 DENND4BO75064 1496 aaPredicted RBP0.58□□□□□ -2.32
SMAD1-203ENST00000502342 MDC1Q14676 2089 aaKnown RBP0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms