RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 DEFB115Q30KQ5 88 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 SMIM21Q3B7S5 101 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 PDZD11Q5EBL8 140 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 RBM48Q5RL73 367 aaKnown RBP2.39□□□□□ -2.03
CALD1-224ENST00000498254 AVPI1Q5T686 147 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 LPCAT4Q643R3 524 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 EPGNQ6UW88 154 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 IGFL2Q6UWQ7 119 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 KRTAP11-1Q8IUC1 163 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 LGI3Q8N145 548 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 ZNF738Q8NE65 137 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 OR6N2Q8NGY6 317 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 OR2AE1Q8NHA4 323 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 SYNPRQ8TBG9 265 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 C15orf40Q8WUR7 153 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 C11orf40Q8WZ69 217 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 C12orf43Q96C57 262 aaKnown RBP2.39□□□□□ -2.03
CALD1-224ENST00000498254 FLYWCH2Q96CP2 140 aaKnown RBP2.39□□□□□ -2.03
CALD1-224ENST00000498254 TLCD1Q96CP7 247 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 YIPF6Q96EC8 236 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 NEURL3Q96EH8 262 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 Q96MT0 163 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 TBX5Q99593 518 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 C20orf144Q9BQM9 153 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 TMEM208Q9BTX3 173 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 MED18Q9BUE0 208 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 CDCA4Q9BXL8 241 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 UGT2B28Q9BY64 529 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 SLC25A39Q9BZJ4 359 aaPredicted RBP2.39□□□□□ -2.03
CALD1-224ENST00000498254 OR52D1Q9H346 318 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 NMNAT1Q9HAN9 279 aaPredicted RBP2.39□□□□□ -2.03
CALD1-224ENST00000498254 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.39□□□□□ -2.03
CALD1-224ENST00000498254 SS18L2Q9UHA2 77 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 ZNF391Q9UJN7 358 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 VPREB3Q9UKI3 123 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 HES2Q9Y543 173 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 OR51B4Q9Y5P0 310 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 WNK3Q9BYP7 1800 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 FAM135BQ49AJ0 1406 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 THOC2Q8NI27 1593 aaKnown RBP2.39□□□□□ -2.03
CALD1-224ENST00000498254 TSPOAP1O95153 1857 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 NAV1Q8NEY1 1877 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 AQRO60306 1485 aaKnown RBP eCLIP2.39□□□□□ -2.03
CALD1-224ENST00000498254 IFT140Q96RY7 1462 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 AKAP12Q02952 1782 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 RIMS1Q86UR5 1692 aaKnown RBP2.38□□□□□ -2.03
CALD1-224ENST00000498254 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.38□□□□□ -2.03
CALD1-224ENST00000498254 IGKV1-27A0A075B6S5 117 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 TGIF2-C20orf24A0A0A6YYL0 155 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 SMIM9A6NGZ8 99 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 ZNF705GA8MUZ8 300 aaPredicted RBP2.38□□□□□ -2.03
CALD1-224ENST00000498254 FAM25AB3EWG3 89 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 FAM25CB3EWG5 89 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 FAM25GB3EWG6 89 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 KRBOX1C9JBD0 128 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 H7C2Y5 167 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 J3QLI3 93 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 CDIPTO14735 213 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 RGS5O15539 181 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 CYB5BO43169 146 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 TCF21O43680 179 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 ALOX12BO75342 701 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 GCM2O75603 506 aaPredicted RBP2.38□□□□□ -2.03
CALD1-224ENST00000498254 SULT1C4O75897 302 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 ORM1P02763 201 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 CD74P04233 296 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 OR56A5P0C7T3 313 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 IGHV1-8P0DP01 117 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 AKR1C4P17516 323 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 RPS12P25398 132 aaKnown RBP2.38□□□□□ -2.03
CALD1-224ENST00000498254 S100GP29377 79 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 CASP1P29466 404 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 POLR2IP36954 125 aaKnown RBP2.38□□□□□ -2.03
CALD1-224ENST00000498254 CD200P41217 278 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 GABRA4P48169 554 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 TTPAP49638 278 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 RAB2AP61019 212 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 MAXP61244 160 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 CRADDP78560 199 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 SYCNQ0VAF6 134 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 SPA17Q15506 151 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 MAPK14Q16539 360 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 LIN52Q52LA3 116 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 MPV17L2Q567V2 206 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 FAM27D1Q5T7N8 215 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 SDHAF4Q5VUM1 108 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 SAMD13Q5VXD3 122 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 MED27Q6P2C8 311 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 DRAM2Q6UX65 266 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 FAM131AQ6UXB0 335 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 CASP12Q6UXS9 341 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 ZFP2Q6ZN57 461 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 TIFABQ6ZNK6 161 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 GRINAQ7Z429 371 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 SMIM20Q8N5G0 67 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 ATPAF2Q8N5M1 289 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 Q8N7P7 452 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 LFNGQ8NES3 379 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 ATP6V1C2Q8NEY4 427 aa2.38□□□□□ -2.03
CALD1-224ENST00000498254 OR2M7Q8NG81 312 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms