RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 ARG1P05089 322 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 ARSAP15289 507 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 HIST1H4AP62805 103 aaKnown RBP5.19□□□□□ -1.58
USF3-204ENST00000496826 IL13RA2Q14627 380 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 TMEM176BQ3YBM2 270 aaPredicted RBP5.19□□□□□ -1.58
USF3-204ENST00000496826 ST8SIA1Q92185 356 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 KCNS1Q96KK3 526 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 SLC17A5Q9NRA2 495 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 ATRXP46100 2492 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 PQLC2LA1A4F0 135 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 TMEM202A6NGA9 273 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 A8MWV9 139 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 BCL2L11O43521 198 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 GFRA3O60609 400 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 GPR75O95800 540 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 MMP9P14780 707 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 B4GALNT1Q00973 533 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 C2orf68Q2NKX9 166 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 OR1F12Q8NHA8 337 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 MRGPRX4Q96LA9 322 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 WFDC6Q9BQY6 131 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 HS3ST3B1Q9Y662 390 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 EDIL3O43854 480 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 CA6P23280 308 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 NKAPP1Q8N9T2 125 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 GPBAR1Q8TDU6 330 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 BIRC7Q96CA5 298 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 GPR146Q96CH1 333 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 PARP11Q9NR21 331 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 IER3IP1Q9Y5U9 82 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 MDC1Q14676 2089 aaKnown RBP5.19□□□□□ -1.58
USF3-204ENST00000496826 E9PQ18 207 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 EDN3P14138 238 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 IFI27P40305 119 aaPredicted RBP5.19□□□□□ -1.58
USF3-204ENST00000496826 HBBP68871 147 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 PHLDA2Q53GA4 152 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 CLEC6AQ6EIG7 209 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 LINC00346Q8IVM7 164 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 KLHDC8AQ8IYD2 350 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 TMEM123Q8N131 208 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 TSKUQ8WUA8 353 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 DCTN5Q9BTE1 182 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 FGFBP2Q9BYJ0 223 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 CHST5Q9GZS9 411 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 FOXD3Q9UJU5 478 aaPredicted RBP5.19□□□□□ -1.58
USF3-204ENST00000496826 CLPSL1A2RUU4 121 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 DLL1O00548 723 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 RPS4XP62701 263 aaKnown RBP5.18□□□□□ -1.58
USF3-204ENST00000496826 FOXK2Q01167 660 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 PPP1R1AQ13522 171 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 OR9G4Q8NGQ1 327 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 C1QTNF4Q9BXJ3 329 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 CD84Q9UIB8 345 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 A0A1B0GWA3 101 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 PRSS37A4D1T9 235 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 TMEM14DPA8MWL7 114 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 TRACP01848 142 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 PDGFAP04085 211 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 CAMPP49913 170 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 HOXC5Q00444 222 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 Q71RC1 249 aaPredicted RBP5.18□□□□□ -1.58
USF3-204ENST00000496826 MED25Q71SY5 747 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 RBM45Q8IUH3 476 aaKnown RBP5.18□□□□□ -1.58
USF3-204ENST00000496826 FAM3DQ96BQ1 224 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 HBEGFQ99075 208 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 MED20Q9H944 212 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 V9GYH0 126 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 DLC1Q96QB1 1528 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 KIF1AQ12756 1690 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 OPRL1P41146 370 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 MPV17LQ2QL34 196 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 FAM89BQ8N5H3 189 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 LOXL4Q96JB6 756 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 SYT11Q9BT88 431 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 SDF2L1Q9HCN8 221 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 ZNF107Q9UII5 783 aaPredicted RBP5.18□□□□□ -1.58
USF3-204ENST00000496826 CSAG2Q9Y5P2 127 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 PRR32B1ATL7 298 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 CD22P20273 847 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 OPRM1P35372 400 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 SCAND1P57086 179 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 ALKBH1Q13686 389 aaKnown RBP5.18□□□□□ -1.58
USF3-204ENST00000496826 IRF2BP2Q7Z5L9 587 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 NRG4Q8WWG1 115 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 FGF13Q92913 245 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 DEFB118Q96PH6 123 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 C21orf62Q9NYP8 219 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 PRR36Q9H6K5 1346 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 WNT7AO00755 349 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 DUSP14O95147 198 aaKnown RBP5.18□□□□□ -1.58
USF3-204ENST00000496826 PAPLNO95428 1278 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 PIRTP0C851 137 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 UCP1P25874 307 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 UTF1Q5T230 341 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 ZNF48Q96MX3 618 aaPredicted RBP5.18□□□□□ -1.58
USF3-204ENST00000496826 SPXQ9BT56 116 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 C22orf46C9J442 243 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 CTAG2O75638 210 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 SCRG1O75711 98 aa5.18□□□□□ -1.58
USF3-204ENST00000496826 REG1BP48304 166 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms