RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 SSX1Q16384 188 aa14.19□□□□□ -0.14
RHBDD3-207ENST00000496342 MPV17LQ2QL34 196 aa14.19□□□□□ -0.14
RHBDD3-207ENST00000496342 FAM53AQ6NSI3 398 aaPredicted RBP14.19□□□□□ -0.14
RHBDD3-207ENST00000496342 GDPGP1Q6ZNW5 385 aa14.19□□□□□ -0.14
RHBDD3-207ENST00000496342 ABHD12Q8N2K0 398 aa14.19□□□□□ -0.14
RHBDD3-207ENST00000496342 OR5R1Q8NH85 324 aa14.19□□□□□ -0.14
RHBDD3-207ENST00000496342 RFESDQ8TAC1 157 aa14.19□□□□□ -0.14
RHBDD3-207ENST00000496342 NDNFQ8TB73 568 aa14.19□□□□□ -0.14
RHBDD3-207ENST00000496342 NEK7Q8TDX7 302 aa14.19□□□□□ -0.14
RHBDD3-207ENST00000496342 CCDC107Q8WV48 283 aa14.19□□□□□ -0.14
RHBDD3-207ENST00000496342 THRSPQ92748 146 aa14.19□□□□□ -0.14
RHBDD3-207ENST00000496342 KIRREL1Q96J84 757 aa14.19□□□□□ -0.14
RHBDD3-207ENST00000496342 ZNF747Q9BV97 191 aa14.19□□□□□ -0.14
RHBDD3-207ENST00000496342 SELENOIQ9C0D9 397 aa14.19□□□□□ -0.14
RHBDD3-207ENST00000496342 IFT22Q9H7X7 185 aa14.19□□□□□ -0.14
RHBDD3-207ENST00000496342 ACOT13Q9NPJ3 140 aa14.19□□□□□ -0.14
RHBDD3-207ENST00000496342 BLOC1S6Q9UL45 172 aa14.19□□□□□ -0.14
RHBDD3-207ENST00000496342 ZNF780AO75290 641 aaPredicted RBP14.18□□□□□ -0.14
RHBDD3-207ENST00000496342 SRMP19623 302 aa14.18□□□□□ -0.14
RHBDD3-207ENST00000496342 KRTAP10-3P60369 221 aa14.18□□□□□ -0.14
RHBDD3-207ENST00000496342 ZNF367Q7RTV3 350 aa14.18□□□□□ -0.14
RHBDD3-207ENST00000496342 LINC00596Q86U02 117 aa14.18□□□□□ -0.14
RHBDD3-207ENST00000496342 RTN4RL2Q86UN3 420 aa14.18□□□□□ -0.14
RHBDD3-207ENST00000496342 OR4F5Q8NH21 305 aa14.18□□□□□ -0.14
RHBDD3-207ENST00000496342 BARHL1Q9BZE3 327 aa14.18□□□□□ -0.14
RHBDD3-207ENST00000496342 ISYNA1Q9NPH2 558 aa14.18□□□□□ -0.14
RHBDD3-207ENST00000496342 OR6C3Q9NZP0 311 aa14.18□□□□□ -0.14
RHBDD3-207ENST00000496342 KBTBD11-OT1A0A1B0GTJ5 212 aa14.17□□□□□ -0.14
RHBDD3-207ENST00000496342 DENRO43583 198 aaKnown RBP14.17□□□□□ -0.14
RHBDD3-207ENST00000496342 MPIG6BO95866 241 aa14.17□□□□□ -0.14
RHBDD3-207ENST00000496342 GABARAPL2P60520 117 aa14.17□□□□□ -0.14
RHBDD3-207ENST00000496342 EMX1Q04741 257 aaPredicted RBP14.17□□□□□ -0.14
RHBDD3-207ENST00000496342 GPR176Q14439 515 aa14.17□□□□□ -0.14
RHBDD3-207ENST00000496342 FBLN7Q53RD9 439 aa14.17□□□□□ -0.14
RHBDD3-207ENST00000496342 OLFML2AQ68BL7 652 aa14.17□□□□□ -0.14
RHBDD3-207ENST00000496342 SIGIRRQ6IA17 410 aa14.17□□□□□ -0.14
RHBDD3-207ENST00000496342 CCBE1Q6UXH8 406 aaPredicted RBP14.17□□□□□ -0.14
RHBDD3-207ENST00000496342 TMEM219Q86XT9 240 aa14.17□□□□□ -0.14
RHBDD3-207ENST00000496342 CDH26Q8IXH8 852 aa14.17□□□□□ -0.14
RHBDD3-207ENST00000496342 LINC01006Q8NI28 216 aa14.17□□□□□ -0.14
RHBDD3-207ENST00000496342 WFDC12Q8WWY7 111 aa14.17□□□□□ -0.14
RHBDD3-207ENST00000496342 PHYHIPQ92561 330 aa14.17□□□□□ -0.14
RHBDD3-207ENST00000496342 Q96M66 194 aa14.17□□□□□ -0.14
RHBDD3-207ENST00000496342 UQCC2Q9BRT2 126 aa14.17□□□□□ -0.14
RHBDD3-207ENST00000496342 RCC2Q9P258 522 aaKnown RBP14.17□□□□□ -0.14
RHBDD3-207ENST00000496342 SIGLEC9Q9Y336 463 aa14.17□□□□□ -0.14
RHBDD3-207ENST00000496342 AK6Q9Y3D8 172 aaKnown RBP14.17□□□□□ -0.14
RHBDD3-207ENST00000496342 TMEM30CPA0ZSE6 113 aa14.16□□□□□ -0.14
RHBDD3-207ENST00000496342 CLPSL1A2RUU4 121 aa14.16□□□□□ -0.14
RHBDD3-207ENST00000496342 IL1AP01583 271 aa14.16□□□□□ -0.14
RHBDD3-207ENST00000496342 VSIG8P0DPA2 414 aa14.16□□□□□ -0.14
RHBDD3-207ENST00000496342 KCNJ3P48549 501 aa14.16□□□□□ -0.14
RHBDD3-207ENST00000496342 GNG10P50151 68 aa14.16□□□□□ -0.14
RHBDD3-207ENST00000496342 RBM39Q14498 530 aaKnown RBP14.16□□□□□ -0.14
RHBDD3-207ENST00000496342 P2RY14Q15391 338 aa14.16□□□□□ -0.14
RHBDD3-207ENST00000496342 C1orf100Q5SVJ3 147 aa14.16□□□□□ -0.14
RHBDD3-207ENST00000496342 GLT8D1Q68CQ7 371 aa14.16□□□□□ -0.14
RHBDD3-207ENST00000496342 SLC35E4Q6ICL7 350 aa14.16□□□□□ -0.14
RHBDD3-207ENST00000496342 RAB12Q6IQ22 244 aa14.16□□□□□ -0.14
RHBDD3-207ENST00000496342 C5orf24Q7Z6I8 188 aa14.16□□□□□ -0.14
RHBDD3-207ENST00000496342 MALSU1Q96EH3 234 aa14.16□□□□□ -0.14
RHBDD3-207ENST00000496342 NICN1Q9BSH3 213 aa14.16□□□□□ -0.14
RHBDD3-207ENST00000496342 BEX1Q9HBH7 125 aa14.16□□□□□ -0.14
RHBDD3-207ENST00000496342 IDI2-AS1Q9NZ38 188 aa14.16□□□□□ -0.14
RHBDD3-207ENST00000496342 MMP24Q9Y5R2 645 aa14.16□□□□□ -0.14
RHBDD3-207ENST00000496342 A0A1W2PPE3 182 aa14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 UBE2QL1A1L167 161 aa14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 IGLV1-47P01700 117 aa14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 CD24P25063 80 aa14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 CALRP27797 417 aaKnown RBP14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 HTR1DP28221 377 aa14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 CD34P28906 385 aa14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 RPL15P61313 204 aaKnown RBP14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 PAX5Q02548 391 aa14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 UNC119Q13432 240 aa14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 HLA-DRB5Q30154 266 aa14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 MINOS1Q5TGZ0 78 aa14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 HIST2H2BDQ6DRA6 164 aa14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 OR52W1Q6IF63 320 aa14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 OR4K15Q8NH41 348 aa14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 Q9H521 79 aa14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 PCDHB16Q9NRJ7 776 aa14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 TCF19Q9Y242 345 aa14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 RNF114Q9Y508 228 aa14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 PEX16Q9Y5Y5 336 aa14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 MINOS1-NBL1R4GNA1 71 aa14.15□□□□□ -0.14
RHBDD3-207ENST00000496342 IGHV3-43A0A0B4J1X8 118 aa14.14□□□□□ -0.15
RHBDD3-207ENST00000496342 SHISA3A0PJX4 238 aa14.14□□□□□ -0.15
RHBDD3-207ENST00000496342 VGLL3A8MV65 326 aa14.14□□□□□ -0.15
RHBDD3-207ENST00000496342 NPIPB11E5RHQ5 1161 aa14.14□□□□□ -0.15
RHBDD3-207ENST00000496342 AIPO00170 330 aa14.14□□□□□ -0.15
RHBDD3-207ENST00000496342 IGHV3-43DP0DP04 118 aa14.14□□□□□ -0.15
RHBDD3-207ENST00000496342 HTR2CP28335 458 aa14.14□□□□□ -0.15
RHBDD3-207ENST00000496342 GABRA5P31644 462 aa14.14□□□□□ -0.15
RHBDD3-207ENST00000496342 CLDN12P56749 244 aa14.14□□□□□ -0.15
RHBDD3-207ENST00000496342 AANATQ16613 207 aa14.14□□□□□ -0.15
RHBDD3-207ENST00000496342 NKAPLQ5M9Q1 402 aa14.14□□□□□ -0.15
RHBDD3-207ENST00000496342 ZNF497Q6ZNH5 498 aa14.14□□□□□ -0.15
RHBDD3-207ENST00000496342 SPARTQ8N0X7 666 aa14.14□□□□□ -0.15
RHBDD3-207ENST00000496342 ZNF565Q8N9K5 539 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms