RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 IGLV1-40P01703 118 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 IGHV3-7P01780 117 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 MT-ND2P03891 347 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 KRT8P05787 483 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 IGHV4-30-4P0DP06 118 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 MYF6P23409 242 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 SOX6P35712 828 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 MNAT1P51948 309 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 GYS2P54840 703 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 ZP1P60852 638 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 SCN1BQ07699 218 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 ATXN7L3Q14CW9 347 aaPredicted RBP10.4□□□□□ -0.74
COL1A1-209ENST00000495677 AADACL4Q5VUY2 407 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 NXNL2Q5VZ03 156 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 MOB3BQ86TA1 216 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 YIPF7Q8N8F6 280 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 C8orf31Q8N9H6 132 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 OR10X1Q8NGY0 326 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 IL17DQ8TAD2 202 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 ST6GALNAC6Q969X2 333 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 ADAT3Q96EY9 351 aaPredicted RBP10.4□□□□□ -0.74
COL1A1-209ENST00000495677 HSPB9Q9BQS6 159 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 KLK15Q9H2R5 256 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 GNB4Q9HAV0 340 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 H2AFY2Q9P0M6 372 aaPredicted RBP10.4□□□□□ -0.74
COL1A1-209ENST00000495677 TAGLN3Q9UI15 199 aa10.4□□□□□ -0.74
COL1A1-209ENST00000495677 FAM90A10PA6NDY2 464 aa10.39□□□□□ -0.75
COL1A1-209ENST00000495677 METTL15A6NJ78 407 aa10.39□□□□□ -0.75
COL1A1-209ENST00000495677 UBCP0CG48 685 aaKnown RBP10.39□□□□□ -0.75
COL1A1-209ENST00000495677 KCNJ3P48549 501 aa10.39□□□□□ -0.75
COL1A1-209ENST00000495677 MTNR1BP49286 362 aa10.39□□□□□ -0.75
COL1A1-209ENST00000495677 CRISP1P54107 249 aa10.39□□□□□ -0.75
COL1A1-209ENST00000495677 GNB1P62873 340 aa10.39□□□□□ -0.75
COL1A1-209ENST00000495677 MS4A2Q01362 244 aa10.39□□□□□ -0.75
COL1A1-209ENST00000495677 TMEM65Q6PI78 240 aa10.39□□□□□ -0.75
COL1A1-209ENST00000495677 SSX6Q7RTT6 188 aa10.39□□□□□ -0.75
COL1A1-209ENST00000495677 OR52M1Q8NGK5 317 aa10.39□□□□□ -0.75
COL1A1-209ENST00000495677 DNAJC9Q8WXX5 260 aa10.39□□□□□ -0.75
COL1A1-209ENST00000495677 DLX4Q92988 240 aaPredicted RBP10.39□□□□□ -0.75
COL1A1-209ENST00000495677 OPALINQ96PE5 141 aa10.39□□□□□ -0.75
COL1A1-209ENST00000495677 SPATA25Q9BR10 227 aa10.39□□□□□ -0.75
COL1A1-209ENST00000495677 TPSG1Q9NRR2 321 aa10.39□□□□□ -0.75
COL1A1-209ENST00000495677 ING3Q9NXR8 418 aa10.39□□□□□ -0.75
COL1A1-209ENST00000495677 KIF25Q9UIL4 384 aa10.39□□□□□ -0.75
COL1A1-209ENST00000495677 MEIKINA0A087WXM9 373 aa10.38□□□□□ -0.75
COL1A1-209ENST00000495677 IGHV3-72A0A0B4J1Y9 119 aa10.38□□□□□ -0.75
COL1A1-209ENST00000495677 H3BSH0 61 aa10.38□□□□□ -0.75
COL1A1-209ENST00000495677 PRKYO43930 277 aa10.38□□□□□ -0.75
COL1A1-209ENST00000495677 ISG15P05161 165 aa10.38□□□□□ -0.75
COL1A1-209ENST00000495677 OR2T7P0C7T2 308 aa10.38□□□□□ -0.75
COL1A1-209ENST00000495677 DBTP11182 482 aaKnown RBP10.38□□□□□ -0.75
COL1A1-209ENST00000495677 HOXB6P17509 224 aaKnown RBP10.38□□□□□ -0.75
COL1A1-209ENST00000495677 GZMHP20718 246 aa10.38□□□□□ -0.75
COL1A1-209ENST00000495677 GLP1RP43220 463 aa10.38□□□□□ -0.75
COL1A1-209ENST00000495677 GNG10P50151 68 aa10.38□□□□□ -0.75
COL1A1-209ENST00000495677 RAB9AP51151 201 aa10.38□□□□□ -0.75
COL1A1-209ENST00000495677 F2RL1P55085 397 aa10.38□□□□□ -0.75
COL1A1-209ENST00000495677 PLECQ15149 4684 aaKnown RBP10.38□□□□□ -0.75
COL1A1-209ENST00000495677 PTGES3Q15185 160 aaKnown RBP10.38□□□□□ -0.75
COL1A1-209ENST00000495677 Q3ZCU0 254 aa10.38□□□□□ -0.75
COL1A1-209ENST00000495677 TMEM244Q5VVB8 128 aa10.38□□□□□ -0.75
COL1A1-209ENST00000495677 RSBN1Q5VWQ0 802 aaPredicted RBP10.38□□□□□ -0.75
COL1A1-209ENST00000495677 PRSS35Q8N3Z0 413 aa10.38□□□□□ -0.75
COL1A1-209ENST00000495677 RTN4IP1Q8WWV3 396 aaPredicted RBP10.38□□□□□ -0.75
COL1A1-209ENST00000495677 LOC107986453A0A1B0GWG9 222 aa10.37□□□□□ -0.75
COL1A1-209ENST00000495677 H0YJX3 145 aa10.37□□□□□ -0.75
COL1A1-209ENST00000495677 GNGT2O14610 69 aa10.37□□□□□ -0.75
COL1A1-209ENST00000495677 APOL3O95236 402 aa10.37□□□□□ -0.75
COL1A1-209ENST00000495677 IFNA6P05013 189 aa10.37□□□□□ -0.75
COL1A1-209ENST00000495677 OR8U9P0C7N5 309 aa10.37□□□□□ -0.75
COL1A1-209ENST00000495677 PRKACGP22612 351 aa10.37□□□□□ -0.75
COL1A1-209ENST00000495677 ELP2Q6IA86 826 aa10.37□□□□□ -0.75
COL1A1-209ENST00000495677 RDH10Q8IZV5 341 aa10.37□□□□□ -0.75
COL1A1-209ENST00000495677 RFESDQ8TAC1 157 aa10.37□□□□□ -0.75
COL1A1-209ENST00000495677 FGGYQ96C11 551 aa10.37□□□□□ -0.75
COL1A1-209ENST00000495677 MBOAT4Q96T53 435 aa10.37□□□□□ -0.75
COL1A1-209ENST00000495677 PRRG3Q9BZD7 231 aa10.37□□□□□ -0.75
COL1A1-209ENST00000495677 ARL8BQ9NVJ2 186 aa10.37□□□□□ -0.75
COL1A1-209ENST00000495677 TRAV24A0A0B4J272 114 aa10.36□□□□□ -0.75
COL1A1-209ENST00000495677 A0A1W2PQL4 384 aaPredicted RBP10.36□□□□□ -0.75
COL1A1-209ENST00000495677 LINC01619G3V211 115 aa10.36□□□□□ -0.75
COL1A1-209ENST00000495677 HSPA12AO43301 675 aa10.36□□□□□ -0.75
COL1A1-209ENST00000495677 TXNL1O43396 289 aa10.36□□□□□ -0.75
COL1A1-209ENST00000495677 SNX3O60493 162 aa10.36□□□□□ -0.75
COL1A1-209ENST00000495677 VHLP40337 213 aa10.36□□□□□ -0.75
COL1A1-209ENST00000495677 REG1BP48304 166 aa10.36□□□□□ -0.75
COL1A1-209ENST00000495677 ZNF137PP52743 207 aa10.36□□□□□ -0.75
COL1A1-209ENST00000495677 GNGT1P63211 74 aa10.36□□□□□ -0.75
COL1A1-209ENST00000495677 GABPB1Q06547 395 aaPredicted RBP10.36□□□□□ -0.75
COL1A1-209ENST00000495677 SRSF7Q16629 238 aaKnown RBP eCLIP10.36□□□□□ -0.75
COL1A1-209ENST00000495677 FAM53AQ6NSI3 398 aaPredicted RBP10.36□□□□□ -0.75
COL1A1-209ENST00000495677 BCDIN3DQ7Z5W3 292 aaKnown RBP10.36□□□□□ -0.75
COL1A1-209ENST00000495677 SGPP2Q8IWX5 399 aa10.36□□□□□ -0.75
COL1A1-209ENST00000495677 HS3ST5Q8IZT8 346 aa10.36□□□□□ -0.75
COL1A1-209ENST00000495677 CNIH3Q8TBE1 160 aa10.36□□□□□ -0.75
COL1A1-209ENST00000495677 MRGPRDQ8TDS7 321 aa10.36□□□□□ -0.75
COL1A1-209ENST00000495677 RNF166Q96A37 237 aaPredicted RBP10.36□□□□□ -0.75
COL1A1-209ENST00000495677 RFT1Q96AA3 541 aa10.36□□□□□ -0.75
COL1A1-209ENST00000495677 EME1Q96AY2 570 aa10.36□□□□□ -0.75
COL1A1-209ENST00000495677 TOLLIPQ9H0E2 274 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms