RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 UNKLQ9H9P5 680 aaKnown RBP14.06□□□□□ -0.16
HDAC6-235ENST00000495515 HSF4Q9ULV5 492 aa14.06□□□□□ -0.16
HDAC6-235ENST00000495515 ZFHX3Q15911 3703 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 UBE2QL1A1L167 161 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 C17orf98A8MV24 154 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 SOCS1O15524 211 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 CCL3L1P16619 93 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 GLP1RP43220 463 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 EFNB2P52799 333 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 BPIFB3P59826 476 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 ERVFRD-1P60508 538 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 GUCA2AQ02747 115 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 ZNF497Q6ZNH5 498 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 Q6ZTK2 550 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 C6orf201Q7Z4U5 140 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 Q8N7P7 452 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 AP3S1Q92572 193 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 RAB3CQ96E17 227 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 TBX15Q96SF7 602 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 HEXA-AS1Q9H8Q6 139 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 RAB9BQ9NP90 201 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 SIRT7Q9NRC8 400 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 NUP50Q9UKX7 468 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 SPATA2Q9UM82 520 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 NAV3Q8IVL0 2385 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 ARHGAP32A7KAX9 2087 aa14.05□□□□□ -0.16
HDAC6-235ENST00000495515 WNK2Q9Y3S1 2297 aa14.04□□□□□ -0.16
HDAC6-235ENST00000495515 SONP18583 2426 aaKnown RBP14.04□□□□□ -0.16
HDAC6-235ENST00000495515 A0A0A6YYD4 124 aa14.04□□□□□ -0.16
HDAC6-235ENST00000495515 TRAV40A0A0B4J280 105 aa14.04□□□□□ -0.16
HDAC6-235ENST00000495515 ZNF729A6NN14 1252 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-235ENST00000495515 PAHP00439 452 aa14.04□□□□□ -0.16
HDAC6-235ENST00000495515 MT-ND4P03905 459 aa14.04□□□□□ -0.16
HDAC6-235ENST00000495515 FAM157CP0CG43 387 aa14.04□□□□□ -0.16
HDAC6-235ENST00000495515 HOXB4P17483 251 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-235ENST00000495515 GZMHP20718 246 aa14.04□□□□□ -0.16
HDAC6-235ENST00000495515 DYNC1I2Q13409 638 aaKnown RBP14.04□□□□□ -0.16
HDAC6-235ENST00000495515 TCF23Q7RTU1 214 aa14.04□□□□□ -0.16
HDAC6-235ENST00000495515 OR10R2Q8NGX6 335 aa14.04□□□□□ -0.16
HDAC6-235ENST00000495515 ACOT12Q8WYK0 555 aa14.04□□□□□ -0.16
HDAC6-235ENST00000495515 SULT4A1Q9BR01 284 aa14.04□□□□□ -0.16
HDAC6-235ENST00000495515 FAAP24Q9BTP7 215 aa14.04□□□□□ -0.16
HDAC6-235ENST00000495515 RIMS4Q9H426 269 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-235ENST00000495515 RHBDL2Q9NX52 303 aa14.04□□□□□ -0.16
HDAC6-235ENST00000495515 TRAPPC2LQ9UL33 140 aa14.04□□□□□ -0.16
HDAC6-235ENST00000495515 MEX3AA1L020 520 aaKnown RBP14.03□□□□□ -0.16
HDAC6-235ENST00000495515 CCDC160A6NGH7 325 aa14.03□□□□□ -0.16
HDAC6-235ENST00000495515 FOXI3A8MTJ6 420 aaPredicted RBP14.03□□□□□ -0.16
HDAC6-235ENST00000495515 CLPXO76031 633 aa14.03□□□□□ -0.16
HDAC6-235ENST00000495515 FSHBP01225 129 aa14.03□□□□□ -0.16
HDAC6-235ENST00000495515 FPR2P25090 351 aa14.03□□□□□ -0.16
HDAC6-235ENST00000495515 SOX6P35712 828 aa14.03□□□□□ -0.16
HDAC6-235ENST00000495515 DLX6P56179 175 aa14.03□□□□□ -0.16
HDAC6-235ENST00000495515 MRPS15P82914 257 aaKnown RBP14.03□□□□□ -0.16
HDAC6-235ENST00000495515 PLA2G7Q13093 441 aa14.03□□□□□ -0.16
HDAC6-235ENST00000495515 C6orf183Q5T699 404 aa14.03□□□□□ -0.16
HDAC6-235ENST00000495515 OR52W1Q6IF63 320 aa14.03□□□□□ -0.16
HDAC6-235ENST00000495515 TRAT1Q6PIZ9 186 aa14.03□□□□□ -0.16
HDAC6-235ENST00000495515 GAPTQ8N292 157 aa14.03□□□□□ -0.16
HDAC6-235ENST00000495515 NDNFQ8TB73 568 aa14.03□□□□□ -0.16
HDAC6-235ENST00000495515 LHX4Q969G2 390 aa14.03□□□□□ -0.16
HDAC6-235ENST00000495515 ISOC1Q96CN7 298 aa14.03□□□□□ -0.16
HDAC6-235ENST00000495515 ARHGAP5-AS1Q96IT6 56 aa14.03□□□□□ -0.16
HDAC6-235ENST00000495515 NF1P21359 2839 aa14.03□□□□□ -0.16
HDAC6-235ENST00000495515 KBTBD11-OT1A0A1B0GTJ5 212 aa14.02□□□□□ -0.17
HDAC6-235ENST00000495515 RAB27BO00194 218 aa14.02□□□□□ -0.17
HDAC6-235ENST00000495515 IGHV1-8P0DP01 117 aa14.02□□□□□ -0.17
HDAC6-235ENST00000495515 ZNF182P17025 639 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-235ENST00000495515 TMEM50BP56557 158 aa14.02□□□□□ -0.17
HDAC6-235ENST00000495515 KLF17Q5JT82 389 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-235ENST00000495515 MZT2AQ6P582 158 aa14.02□□□□□ -0.17
HDAC6-235ENST00000495515 HEPN1Q6WQI6 88 aa14.02□□□□□ -0.17
HDAC6-235ENST00000495515 C11orf42Q8N5U0 333 aa14.02□□□□□ -0.17
HDAC6-235ENST00000495515 OR13A1Q8NGR1 328 aa14.02□□□□□ -0.17
HDAC6-235ENST00000495515 OR13D1Q8NGV5 346 aa14.02□□□□□ -0.17
HDAC6-235ENST00000495515 MRGPRDQ8TDS7 321 aa14.02□□□□□ -0.17
HDAC6-235ENST00000495515 CCDC107Q8WV48 283 aa14.02□□□□□ -0.17
HDAC6-235ENST00000495515 PECRQ9BY49 303 aa14.02□□□□□ -0.17
HDAC6-235ENST00000495515 MS4A7Q9GZW8 240 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-235ENST00000495515 CHMP1AQ9HD42 196 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-235ENST00000495515 CALYQ9NYX4 217 aa14.02□□□□□ -0.17
HDAC6-235ENST00000495515 KCNIP1Q9NZI2 227 aa14.02□□□□□ -0.17
HDAC6-235ENST00000495515 SESN1Q9Y6P5 492 aa14.02□□□□□ -0.17
HDAC6-235ENST00000495515 NSD1Q96L73 2696 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-235ENST00000495515 A0A0A6YYH2 397 aa14.01□□□□□ -0.17
HDAC6-235ENST00000495515 CENPVL3A0A0U1RRI6 287 aa14.01□□□□□ -0.17
HDAC6-235ENST00000495515 A6NJ64 397 aa14.01□□□□□ -0.17
HDAC6-235ENST00000495515 POM121CA8CG34 1229 aa14.01□□□□□ -0.17
HDAC6-235ENST00000495515 SERPINE3A8MV23 424 aa14.01□□□□□ -0.17
HDAC6-235ENST00000495515 ORC5O43913 435 aa14.01□□□□□ -0.17
HDAC6-235ENST00000495515 IGHV4-38-2P0DP08 117 aa14.01□□□□□ -0.17
HDAC6-235ENST00000495515 EPHA1P21709 976 aa14.01□□□□□ -0.17
HDAC6-235ENST00000495515 CDK2P24941 298 aa14.01□□□□□ -0.17
HDAC6-235ENST00000495515 UBE2E1P51965 193 aa14.01□□□□□ -0.17
HDAC6-235ENST00000495515 PLAC9Q5JTB6 97 aa14.01□□□□□ -0.17
HDAC6-235ENST00000495515 ZNF554Q86TJ5 538 aa14.01□□□□□ -0.17
HDAC6-235ENST00000495515 OR5H6Q8NGV6 325 aa14.01□□□□□ -0.17
HDAC6-235ENST00000495515 DIABLOQ9NR28 239 aa14.01□□□□□ -0.17
HDAC6-235ENST00000495515 CEPT1Q9Y6K0 416 aa14.01□□□□□ -0.17
HDAC6-235ENST00000495515 IGHV1-69DA0A0B4J2H0 117 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms