RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, human

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VTI1A-208	ENST00000494728	SNRNP70	P08621	437 aa	Known RBP	9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	RPSA	P08865	295 aa	Known RBP	9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	FAM90A15P	P0C7V4	464 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	FAM90A13P	P0C7W8	464 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	FAM90A14P	P0C7W9	464 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	FAM90A24P	P0C7X0	464 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	IGLL1	P15814	213 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	BRS3	P32247	399 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	RBM11	P57052	281 aa	Known RBP	9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	RPS11	P62280	158 aa	Known RBP eCLIP	9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	PAX5	Q02548	391 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	EMX1	Q04741	257 aa	Predicted RBP	9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	MRPL28	Q13084	256 aa	Known RBP	9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	DDI2	Q5TDH0	399 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	FOXB2	Q5VYV0	432 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	RPL22L1	Q6P5R6	122 aa	Known RBP	9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	C18orf65	Q6ZTR6	163 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	DRAM1	Q8N682	238 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	DTX3	Q8N9I9	347 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	SUMF2	Q8NBJ7	301 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	ZNF485	Q8NCK3	441 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	GPR148	Q8TDV2	347 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	CAPSL	Q8WWF8	208 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	TOMM40L	Q969M1	308 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	SMIM19	Q96E16	107 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	IDI2-AS1	Q9NZ38	188 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	TRBV5-5	A0A0J9YX44	114 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	PIN1P1	O15428	100 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	IGFBP3	P17936	291 aa	Predicted RBP	9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	SERPINA2	P20848	420 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	CEACAM3	P40198	252 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	RSU1	Q15404	277 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	KLHL22	Q53GT1	634 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	C9orf152	Q5JTZ5	239 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	LAIR2	Q6ISS4	152 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	ETV3L	Q6ZN32	361 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	C5orf56	Q8N8D9	126 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	MRAP	Q8TCY5	172 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	STMN2	Q93045	179 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	RPE	Q96AT9	228 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	AKR1E2	Q96JD6	320 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	PGLYRP3	Q96LB9	341 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	NOL4L	Q96MY1	436 aa	Predicted RBP	9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	DPCD	Q9BVM2	203 aa	Predicted RBP	9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	IFT22	Q9H7X7	185 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	NECAP2	Q9NVZ3	263 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	IL36G	Q9NZH8	169 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	ST3GAL6	Q9Y274	331 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	MOB4	Q9Y3A3	225 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	HSPE1-MOB4	S4R3N1	261 aa		9.23	□□□□□ -0.93
VTI1A-208	ENST00000494728	TCRBV4S1A1T	A0A5B7	111 aa		9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	C15orf65	H3BRN8	121 aa		9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	OGG1	O15527	345 aa		9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	OR7C1	O76099	320 aa	Predicted RBP	9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	BAG2	O95816	211 aa		9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	DCK	P27707	260 aa		9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	ZNF93	P35789	620 aa	Predicted RBP	9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	REG1B	P48304	166 aa		9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	PRRX1	P54821	245 aa		9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	LRRC36	Q1X8D7	754 aa		9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	CCDC58	Q4VC31	144 aa		9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	NHLRC3	Q5JS37	347 aa		9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	DMKN	Q6E0U4	476 aa	Predicted RBP	9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	CENPV	Q7Z7K6	275 aa	Predicted RBP	9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	ZNF329	Q86UD4	541 aa		9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	OSR2	Q8N2R0	312 aa		9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	WFDC9	Q8NEX5	89 aa		9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	SGCD	Q92629	289 aa		9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	GHSR	Q92847	366 aa		9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	ZNF184	Q99676	751 aa	Predicted RBP	9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	NCOR1P1	Q9H4R4	102 aa		9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	LINC00527	Q9UJ94	153 aa		9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	DIMT1	Q9UNQ2	313 aa	Known RBP	9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	TSSC4	Q9Y5U2	329 aa	Predicted RBP	9.22	□□□□□ -0.93
VTI1A-208	ENST00000494728	IGHV3-43	A0A0B4J1X8	118 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	IGHV3-72	A0A0B4J1Y9	119 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	PNMA8C	A0A1B0GUJ8	204 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728		A0A1W2PPK0	400 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	LINC01548	A6NM66	108 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	OOSP1	A8MZH6	123 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	SLC31A2	O15432	143 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	MAGEB3	O15480	346 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	IGKV1D-33	P01593	117 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	IGKV1-33	P01594	117 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	CD2	P06729	351 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	GNAO1	P09471	354 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	IGHV3-43D	P0DP04	118 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	PF4V1	P10720	104 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	CD33	P20138	364 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	C21orf33	P30042	268 aa	Predicted RBP	9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	MNDA	P41218	407 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	ARHGDIB	P52566	201 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	LOXL3	P58215	753 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	MADCAM1	Q13477	382 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	HNF4G	Q14541	408 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	SLC22A6	Q4U2R8	563 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	KHDC1L	Q5JSQ8	128 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	CCDC144NL	Q6NUI1	221 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	REC114	Q7Z4M0	266 aa		9.21	□□□□□ -0.94
VTI1A-208	ENST00000494728	ZNF565	Q8N9K5	539 aa		9.21	□□□□□ -0.94

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