RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 A0A0U1RQK1 487 aa11.05□□□□□ -0.64
COL1A1-208ENST00000494334 SMIM30A4D0T7 59 aa11.05□□□□□ -0.64
COL1A1-208ENST00000494334 MCRIP1C9JLW8 97 aa11.05□□□□□ -0.64
COL1A1-208ENST00000494334 NPFFO15130 113 aa11.05□□□□□ -0.64
COL1A1-208ENST00000494334 LDLRAD4O15165 306 aa11.05□□□□□ -0.64
COL1A1-208ENST00000494334 PDCD6O75340 191 aa11.05□□□□□ -0.64
COL1A1-208ENST00000494334 SDC2P34741 201 aa11.05□□□□□ -0.64
COL1A1-208ENST00000494334 RANBP1P43487 201 aa11.05□□□□□ -0.64
COL1A1-208ENST00000494334 RBM39Q14498 530 aaKnown RBP11.05□□□□□ -0.64
COL1A1-208ENST00000494334 C17orf58Q2M2W7 97 aa11.05□□□□□ -0.64
COL1A1-208ENST00000494334 GDPGP1Q6ZNW5 385 aa11.05□□□□□ -0.64
COL1A1-208ENST00000494334 ZNF565Q8N9K5 539 aa11.05□□□□□ -0.64
COL1A1-208ENST00000494334 OR13A1Q8NGR1 328 aa11.05□□□□□ -0.64
COL1A1-208ENST00000494334 NEK7Q8TDX7 302 aa11.05□□□□□ -0.64
COL1A1-208ENST00000494334 LPAR5Q9H1C0 372 aa11.05□□□□□ -0.64
COL1A1-208ENST00000494334 GAL3ST2Q9H3Q3 398 aa11.05□□□□□ -0.64
COL1A1-208ENST00000494334 FBLN5Q9UBX5 448 aa11.05□□□□□ -0.64
COL1A1-208ENST00000494334 TRAV39A0A0B4J263 110 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 TMEM272A0A1B0GTI8 110 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 ZNF729A6NN14 1252 aaPredicted RBP11.04□□□□□ -0.64
COL1A1-208ENST00000494334 NOTOA8MTQ0 251 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 H3BUI4 141 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 AIPO00170 330 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 CLPXO76031 633 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 MT-ND4P03905 459 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 GLAP06280 429 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 CLEC2LP0C7M8 214 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 SLC2A2P11168 524 aaPredicted RBP11.04□□□□□ -0.64
COL1A1-208ENST00000494334 OMGP23515 440 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 COX7A1P24310 79 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 CHATP28329 748 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 GDNFP39905 211 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 PLA2G7Q13093 441 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 TIMM50Q3ZCQ8 353 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 NKAPLQ5M9Q1 402 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 HEPN1Q6WQI6 88 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 RBMS3Q6XE24 437 aaKnown RBP11.04□□□□□ -0.64
COL1A1-208ENST00000494334 ZNF497Q6ZNH5 498 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 FAM89BQ8N5H3 189 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 ZDHHC22Q8N966 263 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 OR13D1Q8NGV5 346 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 MRGPRDQ8TDS7 321 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 DYRK2Q92630 601 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 NEDD4LQ96PU5 975 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 URM1Q9BTM9 101 aaKnown RBP11.04□□□□□ -0.64
COL1A1-208ENST00000494334 ESM1Q9NQ30 184 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 ETAA1Q9NY74 926 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 SESN1Q9Y6P5 492 aa11.04□□□□□ -0.64
COL1A1-208ENST00000494334 A0A0B4J203 849 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 KBTBD11-OT1A0A1B0GTJ5 212 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 TMEM30CPA0ZSE6 113 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 UBE2QL1A1L167 161 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 MEIOCA2RUB1 952 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 SOCS1O15524 211 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 AIREO43918 545 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 CDK2P24941 298 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 BLVRBP30043 206 aaPredicted RBP11.03□□□□□ -0.64
COL1A1-208ENST00000494334 SAA4P35542 130 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 TGFBR1P36897 503 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 GLP1RP43220 463 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 MXD1Q05195 221 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 BAMBIQ13145 260 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 PRAMEF5Q5TYX0 476 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 BAIAP2L2Q6UXY1 529 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 C6orf201Q7Z4U5 140 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 GAPTQ8N292 157 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 OR13F1Q8NGS4 319 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 CCDC107Q8WV48 283 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 JMJD8Q96S16 334 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 FUNDC2Q9BWH2 189 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 MRPS26Q9BYN8 205 aaKnown RBP11.03□□□□□ -0.64
COL1A1-208ENST00000494334 LIN7BQ9HAP6 207 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 CALYQ9NYX4 217 aa11.03□□□□□ -0.64
COL1A1-208ENST00000494334 DSCAML1Q8TD84 2053 aa11.02□□□□□ -0.64
COL1A1-208ENST00000494334 FOXI3A8MTJ6 420 aaPredicted RBP11.02□□□□□ -0.65
COL1A1-208ENST00000494334 NPIPB11E5RHQ5 1161 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 CA11O75493 328 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 GZMHP20718 246 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 EFNB2P52799 333 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 TMEM50BP56557 158 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 LSM3P62310 102 aaKnown RBP11.02□□□□□ -0.65
COL1A1-208ENST00000494334 MIDNQ504T8 468 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 SFXN4Q6P4A7 337 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 Q6YL49 198 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 RTN4RL2Q86UN3 420 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 OR11H6Q8NGC7 330 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 RFESDQ8TAC1 157 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 C17orf50Q8WW18 174 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 ZDHHC16Q969W1 377 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 AJUBAQ96IF1 538 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 SULT4A1Q9BR01 284 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 FAAP24Q9BTP7 215 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 TMEM133Q9H2Q1 129 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 LINC00574Q9H8X3 128 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 DAPK2Q9UIK4 370 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 RAB22AQ9UL26 194 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 FAM96BQ9Y3D0 163 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 MXRA5Q9NR99 2828 aa11.02□□□□□ -0.65
COL1A1-208ENST00000494334 IGHV2-26A0A0B4J1V2 119 aa11.01□□□□□ -0.65
COL1A1-208ENST00000494334 ODF3BA8MYP8 253 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms