RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 RPL23AP62750 156 aaKnown RBP9.89□□□□□ -0.83
RFC4-214ENST00000494047 PNRC1Q12796 327 aaPredicted RBP9.89□□□□□ -0.83
RFC4-214ENST00000494047 ACER2Q5QJU3 275 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 C6orf15Q6UXA7 325 aaPredicted RBP9.89□□□□□ -0.83
RFC4-214ENST00000494047 LYZL2Q7Z4W2 148 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 SLC35G3Q8N808 338 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 SUMF2Q8NBJ7 301 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 OR2AE1Q8NHA4 323 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 PIGCQ92535 297 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 ALKBH3Q96Q83 286 aaPredicted RBP9.89□□□□□ -0.83
RFC4-214ENST00000494047 RPS10P5Q9NQ39 176 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 METTL1Q9UBP6 276 aaKnown RBP9.89□□□□□ -0.83
RFC4-214ENST00000494047 RCL1Q9Y2P8 373 aaKnown RBP9.89□□□□□ -0.83
RFC4-214ENST00000494047 WDFY3Q8IZQ1 3526 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 PTPRQQ9UMZ3 2332 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 TRAV1-1A0A0B4J248 108 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 C21orf140B9A014 251 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 FAM90A26D6RGX4 464 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 UBE2CO00762 179 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 SOX15O60248 233 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 TNFSF15O95150 251 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 IFNA5P01569 189 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 OR8U8P0C7N1 319 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 AADACP22760 399 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 OPRM1P35372 400 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 FOXL2P58012 376 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 TAS2R30P59541 319 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 MSMO1Q15800 293 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 AWAT1Q58HT5 328 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 SOHLH1Q5JUK2 328 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 AKR1C8PQ5T2L2 129 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 NUFIP2Q7Z417 695 aaKnown RBP9.88□□□□□ -0.83
RFC4-214ENST00000494047 RTN4RL2Q86UN3 420 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 BOLLQ8N9W6 283 aaKnown RBP9.88□□□□□ -0.83
RFC4-214ENST00000494047 OR8U1Q8NH10 309 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 LSM10Q969L4 123 aaKnown RBP9.88□□□□□ -0.83
RFC4-214ENST00000494047 C14orf79Q96F83 325 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 C12orf57Q99622 126 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 HDHD3Q9BSH5 251 aaPredicted RBP9.88□□□□□ -0.83
RFC4-214ENST00000494047 CABLES2Q9BTV7 478 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 GPR87Q9BY21 358 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 PARD6GQ9BYG4 376 aaPredicted RBP9.88□□□□□ -0.83
RFC4-214ENST00000494047 FAM96BQ9Y3D0 163 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 LOXL2Q9Y4K0 774 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 WSB1Q9Y6I7 421 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 MEX3AA1L020 520 aaKnown RBP9.88□□□□□ -0.83
RFC4-214ENST00000494047 LRRC3CA6NJW4 275 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 ANKRD30BLA7E2S9 258 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 M0R036 132 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 SS18L1O75177 396 aaPredicted RBP9.88□□□□□ -0.83
RFC4-214ENST00000494047 IFNA1P01562 189 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 ZNF44P15621 663 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 AGAP20933 346 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 HBG1P69891 147 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 HBG2P69892 147 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 CTAG1AP78358 180 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 SRSF3P84103 164 aaKnown RBP9.88□□□□□ -0.83
RFC4-214ENST00000494047 MRPL49Q13405 166 aaKnown RBP9.88□□□□□ -0.83
RFC4-214ENST00000494047 PIGYQ3MUY2 71 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 HIKESHIQ53FT3 197 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 PHLDA2Q53GA4 152 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 FIP1L1Q6UN15 594 aaKnown RBP9.88□□□□□ -0.83
RFC4-214ENST00000494047 SLC25A26Q70HW3 274 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 PPP1R32Q7Z5V6 425 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 IL22RA1Q8N6P7 574 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 TCTEX1D1Q8N7M0 179 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 OR13D1Q8NGV5 346 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 LILRB1Q8NHL6 650 aaPredicted RBP9.88□□□□□ -0.83
RFC4-214ENST00000494047 AKR7LQ8NHP1 331 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 TCTEX1D2Q8WW35 142 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 ERGIC1Q969X5 290 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 HIST1H2BAQ96A08 127 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 ATP5SQ99766 215 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 MESP1Q9BRJ9 268 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 PSMG3Q9BT73 122 aaPredicted RBP9.88□□□□□ -0.83
RFC4-214ENST00000494047 C11orf1Q9H5F2 150 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 TMEM231Q9H6L2 316 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 LIN7CQ9NUP9 197 aaKnown RBP9.88□□□□□ -0.83
RFC4-214ENST00000494047 COA4Q9NYJ1 87 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 POLDIP2Q9Y2S7 368 aa9.88□□□□□ -0.83
RFC4-214ENST00000494047 IGKV1-12A0A0C4DH73 117 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 A0A1W2PNU3 283 aaPredicted RBP9.87□□□□□ -0.83
RFC4-214ENST00000494047 C7orf77A4D0Y5 90 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 KCNAB3O43448 404 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 TRAPPC6AO75865 159 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 CNOT4O95628 575 aaKnown RBP9.87□□□□□ -0.83
RFC4-214ENST00000494047 IGKV1D-12P01611 117 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 ZNF14P17017 642 aaPredicted RBP9.87□□□□□ -0.83
RFC4-214ENST00000494047 KLK2P20151 261 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 TUBG1P23258 451 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 ARHGDIBP52566 201 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 GNG3P63215 75 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 SERF2P84101 59 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 ID3Q02535 119 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 PRDX4Q13162 271 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 PMS2P11Q13670 270 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 EIF2S3LQ2VIR3 472 aaKnown RBP9.87□□□□□ -0.83
RFC4-214ENST00000494047 KHDC3LQ587J8 217 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 NMSQ5H8A3 153 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 SPIN3Q5JUX0 258 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms