RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 DTYMKP23919 212 aa11.82□□□□□ -0.52
VCP-207ENST00000493886 PDCD1Q15116 288 aa11.82□□□□□ -0.52
VCP-207ENST00000493886 OR8G1Q15617 311 aa11.82□□□□□ -0.52
VCP-207ENST00000493886 BCL2L2Q92843 193 aaPredicted RBP11.82□□□□□ -0.52
VCP-207ENST00000493886 C2orf88Q9BSF0 95 aa11.82□□□□□ -0.52
VCP-207ENST00000493886 UQCC1Q9NVA1 299 aa11.82□□□□□ -0.52
VCP-207ENST00000493886 LPAR3Q9UBY5 353 aa11.82□□□□□ -0.52
VCP-207ENST00000493886 MED12LQ86YW9 2145 aa11.82□□□□□ -0.52
VCP-207ENST00000493886 APLNRP35414 380 aa11.82□□□□□ -0.52
VCP-207ENST00000493886 RBM11P57052 281 aaKnown RBP11.82□□□□□ -0.52
VCP-207ENST00000493886 RBM39Q14498 530 aaKnown RBP11.82□□□□□ -0.52
VCP-207ENST00000493886 SURF2Q15527 256 aaPredicted RBP11.82□□□□□ -0.52
VCP-207ENST00000493886 NSUN5P2Q63ZY6 315 aa11.82□□□□□ -0.52
VCP-207ENST00000493886 P4HA3Q7Z4N8 544 aa11.82□□□□□ -0.52
VCP-207ENST00000493886 POC1AQ8NBT0 407 aa11.82□□□□□ -0.52
VCP-207ENST00000493886 HPSE2Q8WWQ2 592 aa11.82□□□□□ -0.52
VCP-207ENST00000493886 MARS2Q96GW9 593 aaKnown RBP11.82□□□□□ -0.52
VCP-207ENST00000493886 C2orf50Q96LR7 162 aa11.82□□□□□ -0.52
VCP-207ENST00000493886 SLC5A7Q9GZV3 580 aa11.82□□□□□ -0.52
VCP-207ENST00000493886 FGF23Q9GZV9 251 aaPredicted RBP11.82□□□□□ -0.52
VCP-207ENST00000493886 RHOFQ9HBH0 211 aa11.82□□□□□ -0.52
VCP-207ENST00000493886 SIRT7Q9NRC8 400 aa11.82□□□□□ -0.52
VCP-207ENST00000493886 C19orf12Q9NSK7 152 aa11.82□□□□□ -0.52
VCP-207ENST00000493886 C14orf166Q9Y224 244 aaKnown RBP11.82□□□□□ -0.52
VCP-207ENST00000493886 MED19A0JLT2 244 aaPredicted RBP11.81□□□□□ -0.52
VCP-207ENST00000493886 CST4P01036 141 aa11.81□□□□□ -0.52
VCP-207ENST00000493886 FCGR3AP08637 254 aa11.81□□□□□ -0.52
VCP-207ENST00000493886 RBMXP38159 391 aaKnown RBP11.81□□□□□ -0.52
VCP-207ENST00000493886 NPBWR2P48146 333 aa11.81□□□□□ -0.52
VCP-207ENST00000493886 FXYD4P59646 89 aa11.81□□□□□ -0.52
VCP-207ENST00000493886 FABP9Q0Z7S8 132 aa11.81□□□□□ -0.52
VCP-207ENST00000493886 IGFL2Q6UWQ7 119 aa11.81□□□□□ -0.52
VCP-207ENST00000493886 ZDHHC23Q8IYP9 409 aa11.81□□□□□ -0.52
VCP-207ENST00000493886 GMPPAQ96IJ6 420 aaPredicted RBP11.81□□□□□ -0.52
VCP-207ENST00000493886 TAF9BQ9HBM6 251 aa11.81□□□□□ -0.52
VCP-207ENST00000493886 TMEM100Q9NV29 134 aa11.81□□□□□ -0.52
VCP-207ENST00000493886 GOLT1BQ9Y3E0 138 aa11.81□□□□□ -0.52
VCP-207ENST00000493886 CNOT1A5YKK6 2376 aaKnown RBP11.81□□□□□ -0.52
VCP-207ENST00000493886 PDCD6O75340 191 aa11.81□□□□□ -0.52
VCP-207ENST00000493886 IGHG3P01860 377 aa11.81□□□□□ -0.52
VCP-207ENST00000493886 CEACAM21Q3KPI0 293 aa11.81□□□□□ -0.52
VCP-207ENST00000493886 AVPI1Q5T686 147 aa11.81□□□□□ -0.52
VCP-207ENST00000493886 IGF2-ASQ6U949 168 aa11.81□□□□□ -0.52
VCP-207ENST00000493886 SPAG16Q8N0X2 631 aa11.81□□□□□ -0.52
VCP-207ENST00000493886 ZNF561Q8N587 486 aa11.81□□□□□ -0.52
VCP-207ENST00000493886 NANOS1Q8WY41 292 aaKnown RBP11.81□□□□□ -0.52
VCP-207ENST00000493886 GGACTQ9BVM4 153 aa11.81□□□□□ -0.52
VCP-207ENST00000493886 MMP26Q9NRE1 261 aa11.81□□□□□ -0.52
VCP-207ENST00000493886 TNRC6AQ8NDV7 1962 aaKnown RBP11.8□□□□□ -0.52
VCP-207ENST00000493886 CD80P33681 288 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 WNT5AP41221 380 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 GPM6AP51674 278 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 PJVKQ0ZLH3 352 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 TCF15Q12870 199 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 MDP1Q86V88 176 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 MRPL24Q96A35 216 aaKnown RBP11.8□□□□□ -0.52
VCP-207ENST00000493886 OPA3Q9H6K4 179 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 PTPRBP23467 1997 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 A0A1B0GV50 99 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 CD300LBA8K4G0 201 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 OR5H8P0DN80 308 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 ECI1P42126 302 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 NRIP2Q9BQI9 281 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 TCEAL7Q9BRU2 100 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 CLCF1Q9UBD9 225 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 FBXL17Q9UF56 701 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 A0A087X0M5 115 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 A0A1B0GX30 115 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 C9JQL5 133 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 IFNA2P01563 188 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 NPSP0C0P6 89 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 NAAAQ02083 359 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 DAZAP2Q15038 168 aaPredicted RBP11.8□□□□□ -0.52
VCP-207ENST00000493886 NCMAPQ5T1S8 102 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 AQP10Q96PS8 301 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 PRO1933Q9H354 126 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 LIME1Q9H400 295 aa11.8□□□□□ -0.52
VCP-207ENST00000493886 TRAV17A0A0B4J275 112 aa11.79□□□□□ -0.52
VCP-207ENST00000493886 ZNF732B4DXR9 585 aa11.79□□□□□ -0.52
VCP-207ENST00000493886 OR7C1O76099 320 aaPredicted RBP11.79□□□□□ -0.52
VCP-207ENST00000493886 SCAF4O95104 1147 aaKnown RBP11.79□□□□□ -0.52
VCP-207ENST00000493886 SFTA3P0C7M3 94 aa11.79□□□□□ -0.52
VCP-207ENST00000493886 HKR1P10072 659 aa11.79□□□□□ -0.52
VCP-207ENST00000493886 BCL3P20749 454 aa11.79□□□□□ -0.52
VCP-207ENST00000493886 FUT3P21217 361 aa11.79□□□□□ -0.52
VCP-207ENST00000493886 TNFRSF9Q07011 255 aa11.79□□□□□ -0.52
VCP-207ENST00000493886 PHLDA2Q53GA4 152 aa11.79□□□□□ -0.52
VCP-207ENST00000493886 FAM86C1Q9NVL1 165 aa11.79□□□□□ -0.52
VCP-207ENST00000493886 NECAP2Q9NVZ3 263 aa11.79□□□□□ -0.52
VCP-207ENST00000493886 TMEM210A6NLX4 147 aa11.79□□□□□ -0.52
VCP-207ENST00000493886 K7EPK0 472 aa11.79□□□□□ -0.52
VCP-207ENST00000493886 WISP2O76076 250 aa11.79□□□□□ -0.52
VCP-207ENST00000493886 RPL12P30050 165 aaKnown RBP11.79□□□□□ -0.52
VCP-207ENST00000493886 DEFB109BQ30KR1 87 aa11.79□□□□□ -0.52
VCP-207ENST00000493886 Q6ZRG5 221 aa11.79□□□□□ -0.52
VCP-207ENST00000493886 C1orf122Q6ZSJ8 110 aa11.79□□□□□ -0.52
VCP-207ENST00000493886 S100A7AQ86SG5 101 aa11.79□□□□□ -0.52
VCP-207ENST00000493886 SAXO1Q8IYX7 474 aa11.79□□□□□ -0.52
VCP-207ENST00000493886 FAM71E2Q8N5Q1 922 aa11.79□□□□□ -0.52
VCP-207ENST00000493886 ZNF442Q9H7R0 627 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms