RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 RBM39Q14498 530 aaKnown RBP14.67□□□□□ -0.06
PDLIM7-208ENST00000493815 ZNF782Q6ZMW2 699 aaPredicted RBP14.67□□□□□ -0.06
PDLIM7-208ENST00000493815 ZNF497Q6ZNH5 498 aa14.67□□□□□ -0.06
PDLIM7-208ENST00000493815 CMTM4Q8IZR5 234 aa14.67□□□□□ -0.06
PDLIM7-208ENST00000493815 OR4K15Q8NH41 348 aa14.67□□□□□ -0.06
PDLIM7-208ENST00000493815 MRGPRDQ8TDS7 321 aa14.67□□□□□ -0.06
PDLIM7-208ENST00000493815 UPRTQ96BW1 309 aa14.67□□□□□ -0.06
PDLIM7-208ENST00000493815 ZNF714Q96N38 554 aa14.67□□□□□ -0.06
PDLIM7-208ENST00000493815 RHBDL2Q9NX52 303 aa14.67□□□□□ -0.06
PDLIM7-208ENST00000493815 CUBNO60494 3623 aa14.67□□□□□ -0.06
PDLIM7-208ENST00000493815 TRAV40A0A0B4J280 105 aa14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 TMEM30CPA0ZSE6 113 aa14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 RAB27BO00194 218 aa14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 MT-ND4P03905 459 aa14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 HNF1AP20823 631 aa14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 OMGP23515 440 aa14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 SRP14P37108 136 aaKnown RBP14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 KIAA2026Q5HYC2 2103 aa14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 SLC35E4Q6ICL7 350 aa14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 Q6ZTK2 550 aa14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 KIR3DL3Q8N743 410 aa14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 OR10R2Q8NGX6 335 aa14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 LHX4Q969G2 390 aa14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 PTX4Q96A99 478 aa14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 POM121Q96HA1 1249 aa14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 HDHD3Q9BSH5 251 aaPredicted RBP14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 PECRQ9BY49 303 aa14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 RBM38Q9H0Z9 239 aaKnown RBP14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 ABRACLQ9P1F3 81 aa14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 LPAR3Q9UBY5 353 aa14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 CDC42EP3Q9UKI2 254 aa14.66□□□□□ -0.06
PDLIM7-208ENST00000493815 A0A1W2PPH5 198 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 METTL21EPA6NDL7 271 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 M0R1W7 72 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 MMP23AO75900 390 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 GNB3P16520 340 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 UBALD1Q8TB05 177 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 NANPQ8TBE9 248 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 C22orf15Q8WYQ4 148 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 RAB3CQ96E17 227 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 METTL8Q9H825 291 aaKnown RBP14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 COMMD3Q9UBI1 195 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 AK3Q9UIJ7 227 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 SPATA2Q9UM82 520 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 KCNK7Q9Y2U2 307 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 UBE2J1Q9Y385 318 aaPredicted RBP14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 ETV7Q9Y603 341 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 DSCAML1Q8TD84 2053 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 A0A1W2PRD5 423 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 A0A1W2PRF3 423 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 A0A1W2PRM7 423 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 H3BUI4 141 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 GLAP06280 429 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 SSTR5P35346 364 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 PAX5Q02548 391 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 CHRFAM7AQ494W8 412 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 PRAMEF5Q5TYX0 476 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 BAIAP2L2Q6UXY1 529 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 C5orf24Q7Z6I8 188 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 SAMD12Q8N8I0 201 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 DTX3Q8N9I9 347 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 RFESDQ8TAC1 157 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 CORO2AQ92828 525 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 DMRTB1Q96MA1 342 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 BCL7BQ9BQE9 202 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 OR6C3Q9NZP0 311 aa14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 ELF5Q9UKW6 265 aaPredicted RBP14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 SOX21Q9Y651 276 aaPredicted RBP14.65□□□□□ -0.06
PDLIM7-208ENST00000493815 C17orf98A8MV24 154 aa14.64□□□□□ -0.07
PDLIM7-208ENST00000493815 CRLF1O75462 422 aa14.64□□□□□ -0.07
PDLIM7-208ENST00000493815 RCC1P18754 421 aaPredicted RBP14.64□□□□□ -0.07
PDLIM7-208ENST00000493815 RUSC1-AS1Q66K80 236 aa14.64□□□□□ -0.07
PDLIM7-208ENST00000493815 BRD3OSQ6XYD6 125 aa14.64□□□□□ -0.07
PDLIM7-208ENST00000493815 PNKDQ8N490 385 aa14.64□□□□□ -0.07
PDLIM7-208ENST00000493815 ZNF565Q8N9K5 539 aa14.64□□□□□ -0.07
PDLIM7-208ENST00000493815 TNFRSF14Q92956 283 aa14.64□□□□□ -0.07
PDLIM7-208ENST00000493815 TRAPPC2LQ9UL33 140 aa14.64□□□□□ -0.07
PDLIM7-208ENST00000493815 HSF4Q9ULV5 492 aa14.64□□□□□ -0.07
PDLIM7-208ENST00000493815 CENPVL3A0A0U1RRI6 287 aa14.63□□□□□ -0.07
PDLIM7-208ENST00000493815 DPPA5A6NC42 116 aa14.63□□□□□ -0.07
PDLIM7-208ENST00000493815 FAM172BPA6NC97 362 aa14.63□□□□□ -0.07
PDLIM7-208ENST00000493815 RNASEK-C17orf49H0YIS7 233 aa14.63□□□□□ -0.07
PDLIM7-208ENST00000493815 FSHBP01225 129 aa14.63□□□□□ -0.07
PDLIM7-208ENST00000493815 HOXB4P17483 251 aaPredicted RBP14.63□□□□□ -0.07
PDLIM7-208ENST00000493815 SRD5A1P18405 259 aa14.63□□□□□ -0.07
PDLIM7-208ENST00000493815 PRTN3P24158 256 aa14.63□□□□□ -0.07
PDLIM7-208ENST00000493815 CDK2P24941 298 aa14.63□□□□□ -0.07
PDLIM7-208ENST00000493815 GDNFP39905 211 aa14.63□□□□□ -0.07
PDLIM7-208ENST00000493815 SCAND1P57086 179 aa14.63□□□□□ -0.07
PDLIM7-208ENST00000493815 LTC4SQ16873 150 aa14.63□□□□□ -0.07
PDLIM7-208ENST00000493815 C17orf58Q2M2W7 97 aa14.63□□□□□ -0.07
PDLIM7-208ENST00000493815 Q6ZPA2 131 aa14.63□□□□□ -0.07
PDLIM7-208ENST00000493815 C1orf122Q6ZSJ8 110 aa14.63□□□□□ -0.07
PDLIM7-208ENST00000493815 MRPL30Q8TCC3 161 aaKnown RBP14.63□□□□□ -0.07
PDLIM7-208ENST00000493815 DYNC2LI1Q8TCX1 351 aa14.63□□□□□ -0.07
PDLIM7-208ENST00000493815 SETD2Q9BYW2 2564 aaPredicted RBP14.62□□□□□ -0.07
PDLIM7-208ENST00000493815 CGB3P0DN86 165 aa14.62□□□□□ -0.07
PDLIM7-208ENST00000493815 CGB7P0DN87 165 aa14.62□□□□□ -0.07
PDLIM7-208ENST00000493815 IGHV1-8P0DP01 117 aa14.62□□□□□ -0.07
PDLIM7-208ENST00000493815 HIST1H1DP16402 221 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms