RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 H0YHG0 523 aa13.69□□□□□ -0.22
COL9A1-210ENST00000493682 SULT1B1O43704 296 aa13.69□□□□□ -0.22
COL9A1-210ENST00000493682 IGKV1D-33P01593 117 aa13.69□□□□□ -0.22
COL9A1-210ENST00000493682 IGKV1-33P01594 117 aa13.69□□□□□ -0.22
COL9A1-210ENST00000493682 SLC25A30Q5SVS4 291 aa13.69□□□□□ -0.22
COL9A1-210ENST00000493682 RSBN1Q5VWQ0 802 aaPredicted RBP13.69□□□□□ -0.22
COL9A1-210ENST00000493682 ZNF695Q8IW36 515 aa13.69□□□□□ -0.22
COL9A1-210ENST00000493682 SERPINA12Q8IW75 414 aa13.69□□□□□ -0.22
COL9A1-210ENST00000493682 STPG2Q8N412 459 aa13.69□□□□□ -0.22
COL9A1-210ENST00000493682 OR5D14Q8NGL3 314 aa13.69□□□□□ -0.22
COL9A1-210ENST00000493682 MRGPRDQ8TDS7 321 aa13.69□□□□□ -0.22
COL9A1-210ENST00000493682 TFAP2CQ92754 450 aa13.69□□□□□ -0.22
COL9A1-210ENST00000493682 RAX2Q96IS3 184 aa13.69□□□□□ -0.22
COL9A1-210ENST00000493682 ZMAT5Q9UDW3 170 aaKnown RBP13.69□□□□□ -0.22
COL9A1-210ENST00000493682 SAC3D1A6NKF1 404 aa13.68□□□□□ -0.22
COL9A1-210ENST00000493682 SSTR5P35346 364 aa13.68□□□□□ -0.22
COL9A1-210ENST00000493682 SNRPGP62308 76 aaKnown RBP13.68□□□□□ -0.22
COL9A1-210ENST00000493682 PAX5Q02548 391 aa13.68□□□□□ -0.22
COL9A1-210ENST00000493682 ZSCAN26Q16670 478 aa13.68□□□□□ -0.22
COL9A1-210ENST00000493682 C1orf146Q5VVC0 180 aa13.68□□□□□ -0.22
COL9A1-210ENST00000493682 LPCAT4Q643R3 524 aa13.68□□□□□ -0.22
COL9A1-210ENST00000493682 SLC16A12Q6ZSM3 486 aa13.68□□□□□ -0.22
COL9A1-210ENST00000493682 FOXRED2Q8IWF2 684 aa13.68□□□□□ -0.22
COL9A1-210ENST00000493682 PARP16Q8N5Y8 322 aa13.68□□□□□ -0.22
COL9A1-210ENST00000493682 PXT1Q8NFP0 134 aa13.68□□□□□ -0.22
COL9A1-210ENST00000493682 OR10A7Q8NGE5 316 aa13.68□□□□□ -0.22
COL9A1-210ENST00000493682 OR10X1Q8NGY0 326 aa13.68□□□□□ -0.22
COL9A1-210ENST00000493682 PLPPR1Q8TBJ4 325 aa13.68□□□□□ -0.22
COL9A1-210ENST00000493682 EXOGQ9Y2C4 368 aaKnown RBP13.68□□□□□ -0.22
COL9A1-210ENST00000493682 TRAV39A0A0B4J263 110 aa13.67□□□□□ -0.22
COL9A1-210ENST00000493682 A0A1W2PPE3 182 aa13.67□□□□□ -0.22
COL9A1-210ENST00000493682 CCL24O00175 119 aa13.67□□□□□ -0.22
COL9A1-210ENST00000493682 ZFPL1O95159 310 aa13.67□□□□□ -0.22
COL9A1-210ENST00000493682 RAB25P57735 213 aa13.67□□□□□ -0.22
COL9A1-210ENST00000493682 EBI3Q14213 229 aa13.67□□□□□ -0.22
COL9A1-210ENST00000493682 PIGYQ3MUY2 71 aa13.67□□□□□ -0.22
COL9A1-210ENST00000493682 MEDAGQ5VYS4 303 aa13.67□□□□□ -0.22
COL9A1-210ENST00000493682 LHFPL3Q86UP9 236 aa13.67□□□□□ -0.22
COL9A1-210ENST00000493682 ISG20L2Q9H9L3 353 aaKnown RBP13.67□□□□□ -0.22
COL9A1-210ENST00000493682 HSD17B6O14756 317 aa13.66□□□□□ -0.22
COL9A1-210ENST00000493682 NHLRC4P0CG21 123 aaPredicted RBP13.66□□□□□ -0.22
COL9A1-210ENST00000493682 REG1BP48304 166 aa13.66□□□□□ -0.22
COL9A1-210ENST00000493682 KCNJ3P48549 501 aa13.66□□□□□ -0.22
COL9A1-210ENST00000493682 GP2P55259 537 aaKnown RBP13.66□□□□□ -0.22
COL9A1-210ENST00000493682 ZNF816Q0VGE8 651 aaPredicted RBP13.66□□□□□ -0.22
COL9A1-210ENST00000493682 GALEQ14376 348 aa13.66□□□□□ -0.22
COL9A1-210ENST00000493682 IL13RA2Q14627 380 aa13.66□□□□□ -0.22
COL9A1-210ENST00000493682 TEX38Q6PEX7 206 aa13.66□□□□□ -0.22
COL9A1-210ENST00000493682 MOB3BQ86TA1 216 aa13.66□□□□□ -0.22
COL9A1-210ENST00000493682 OR10K1Q8NGX5 313 aa13.66□□□□□ -0.22
COL9A1-210ENST00000493682 TNFAIP8L1Q8WVP5 186 aa13.66□□□□□ -0.22
COL9A1-210ENST00000493682 LGALS12Q96DT0 336 aa13.66□□□□□ -0.22
COL9A1-210ENST00000493682 MRPL48Q96GC5 212 aaKnown RBP13.66□□□□□ -0.22
COL9A1-210ENST00000493682 EAF1Q96JC9 268 aaPredicted RBP13.66□□□□□ -0.22
COL9A1-210ENST00000493682 ALG8Q9BVK2 526 aa13.66□□□□□ -0.22
COL9A1-210ENST00000493682 DCLRE1BQ9H816 532 aa13.66□□□□□ -0.22
COL9A1-210ENST00000493682 ZNF581Q9P0T4 197 aa13.66□□□□□ -0.22
COL9A1-210ENST00000493682 AASSQ9UDR5 926 aa13.66□□□□□ -0.22
COL9A1-210ENST00000493682 IGHV3-72A0A0B4J1Y9 119 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 IGHV1-3A0A0C4DH29 117 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 TMEM212A6NML5 194 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 NCBP2LA6PVI3 153 aaKnown RBP13.65□□□□□ -0.22
COL9A1-210ENST00000493682 E9PI62 339 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 AP4M1O00189 453 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 CCRL2O00421 344 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 GABRPO00591 440 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 RAMP3O60896 148 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 GAPDHP04406 335 aaKnown RBP13.65□□□□□ -0.22
COL9A1-210ENST00000493682 ALPLP05186 524 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 RPLP1P05386 114 aaKnown RBP13.65□□□□□ -0.22
COL9A1-210ENST00000493682 RPSAP08865 295 aaKnown RBP13.65□□□□□ -0.22
COL9A1-210ENST00000493682 GPR12P47775 334 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 LUMP51884 338 aaPredicted RBP13.65□□□□□ -0.22
COL9A1-210ENST00000493682 ZNF529Q6P280 563 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 SATL1Q86VE3 508 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 TGIF2LXQ8IUE1 241 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 SYS1Q8N2H4 156 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 Q8N6K4 173 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 Q8NFD4 153 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 OR5AK2Q8NH90 309 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 CPNE2Q96FN4 548 aaPredicted RBP13.65□□□□□ -0.22
COL9A1-210ENST00000493682 GPER1Q99527 375 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 PDCD1LG2Q9BQ51 273 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 DPCDQ9BVM2 203 aaPredicted RBP13.65□□□□□ -0.22
COL9A1-210ENST00000493682 ABCG5Q9H222 651 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 DHDHQ9UQ10 334 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 LSM4Q9Y4Z0 139 aaKnown RBP13.65□□□□□ -0.22
COL9A1-210ENST00000493682 U3KQK5 164 aa13.65□□□□□ -0.22
COL9A1-210ENST00000493682 SNTNA6NMZ2 147 aa13.64□□□□□ -0.23
COL9A1-210ENST00000493682 RAB3AP20336 220 aa13.64□□□□□ -0.23
COL9A1-210ENST00000493682 RSU1Q15404 277 aa13.64□□□□□ -0.23
COL9A1-210ENST00000493682 PNLIPRP3Q17RR3 467 aa13.64□□□□□ -0.23
COL9A1-210ENST00000493682 DEFB136Q30KP8 78 aa13.64□□□□□ -0.23
COL9A1-210ENST00000493682 ZIK1Q3SY52 487 aaPredicted RBP13.64□□□□□ -0.23
COL9A1-210ENST00000493682 LCNL1Q6ZST4 164 aa13.64□□□□□ -0.23
COL9A1-210ENST00000493682 IZUMO1Q8IYV9 350 aa13.64□□□□□ -0.23
COL9A1-210ENST00000493682 Q8N9W7 124 aa13.64□□□□□ -0.23
COL9A1-210ENST00000493682 SUMF2Q8NBJ7 301 aa13.64□□□□□ -0.23
COL9A1-210ENST00000493682 OR51A2Q8NGJ7 313 aa13.64□□□□□ -0.23
COL9A1-210ENST00000493682 TSEN15Q8WW01 171 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms