RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 DAOP14920 347 aa10.54□□□□□ -0.72
VPS52-220ENST00000493674 HLA-DMAP28067 261 aa10.54□□□□□ -0.72
VPS52-220ENST00000493674 HRH1P35367 487 aa10.54□□□□□ -0.72
VPS52-220ENST00000493674 CDKN1AP38936 164 aa10.54□□□□□ -0.72
VPS52-220ENST00000493674 BTG1P62324 171 aa10.54□□□□□ -0.72
VPS52-220ENST00000493674 MRPS15P82914 257 aaKnown RBP10.54□□□□□ -0.72
VPS52-220ENST00000493674 ATXN7L3Q14CW9 347 aaPredicted RBP10.54□□□□□ -0.72
VPS52-220ENST00000493674 TRIM16LQ309B1 348 aa10.54□□□□□ -0.72
VPS52-220ENST00000493674 MALRD1Q5VYJ5 2156 aa10.54□□□□□ -0.72
VPS52-220ENST00000493674 FAAP20Q6NZ36 180 aa10.54□□□□□ -0.72
VPS52-220ENST00000493674 DUX4L9Q6RFH8 374 aaPredicted RBP10.54□□□□□ -0.72
VPS52-220ENST00000493674 CCBE1Q6UXH8 406 aaPredicted RBP10.54□□□□□ -0.72
VPS52-220ENST00000493674 OVCH2Q7RTZ1 564 aa10.54□□□□□ -0.72
VPS52-220ENST00000493674 OR5AP2Q8NGF4 316 aa10.54□□□□□ -0.72
VPS52-220ENST00000493674 OR4K15Q8NH41 348 aa10.54□□□□□ -0.72
VPS52-220ENST00000493674 MAFIPQ8WZ33 124 aa10.54□□□□□ -0.72
VPS52-220ENST00000493674 SLC6A7Q99884 636 aa10.54□□□□□ -0.72
VPS52-220ENST00000493674 ST6GALNAC5Q9BVH7 336 aa10.54□□□□□ -0.72
VPS52-220ENST00000493674 ZNF286AQ9HBT8 521 aa10.54□□□□□ -0.72
VPS52-220ENST00000493674 DUX4Q9UBX2 424 aa10.54□□□□□ -0.72
VPS52-220ENST00000493674 ARHGAP32A7KAX9 2087 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 FAM240BA0A1B0GVZ2 78 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 NKX6-3A6NJ46 265 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 NDUFA2O43678 99 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 F12P00748 615 aaPredicted RBP10.53□□□□□ -0.72
VPS52-220ENST00000493674 GYPAP02724 150 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 SELLP14151 372 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 PAX1P15863 534 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 ERP29P30040 261 aaKnown RBP10.53□□□□□ -0.72
VPS52-220ENST00000493674 GABRA2P47869 451 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 EFNA4P52798 201 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 IL13RA1P78552 427 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 HMGN3Q15651 99 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 GRK1Q15835 563 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 CR1LQ2VPA4 569 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 RNASE10Q5GAN6 216 aaKnown RBP10.53□□□□□ -0.72
VPS52-220ENST00000493674 ZNF660Q6AZW8 331 aaPredicted RBP10.53□□□□□ -0.72
VPS52-220ENST00000493674 ARRDC1Q8N5I2 433 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 ASCC1Q8N9N2 400 aaKnown RBP10.53□□□□□ -0.72
VPS52-220ENST00000493674 DEFB108BQ8NET1 73 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 OR56B4Q8NH76 319 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 PPP1R35Q8TAP8 253 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 ENKURQ8TC29 256 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 MRGPRFQ96AM1 343 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 CCL13Q99616 98 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 TMEM246Q9BRR3 403 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 DPAGT1Q9H3H5 408 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 CHODLQ9H9P2 273 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 MYOZ1Q9NP98 299 aaPredicted RBP10.53□□□□□ -0.72
VPS52-220ENST00000493674 COPZ2Q9P299 210 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 MGAT4AQ9UM21 535 aa10.53□□□□□ -0.72
VPS52-220ENST00000493674 KIR2DS1A0A191URI9 304 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 CEACAM18A8MTB9 384 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 NDUFS7O75251 213 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 LY6HO94772 140 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 DIRAS3O95661 229 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 AMY2AP04746 511 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 GIFP27352 417 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 KIR2DS4P43632 304 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 CCR6P51684 374 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 P2RX3P56373 397 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 HLA-DRB3P79483 266 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 AESQ08117 197 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 KIR2DS1Q14954 304 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 HERPUD1Q15011 391 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 CDK10Q15131 360 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 KCNJ8Q15842 424 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 ZNF554Q86TJ5 538 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 GLCCI1Q86VQ1 547 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 LHFPL1Q86WI0 220 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 FAM216BQ8N7L0 139 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 ZNRF1Q8ND25 227 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 OR51S1Q8NGJ8 323 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 OR5D13Q8NGL4 314 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 OR5H2Q8NGV7 314 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 UPRTQ96BW1 309 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 MED30Q96HR3 178 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 MARVELD1Q9BSK0 173 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 CABLES2Q9BTV7 478 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 CHMP1AQ9HD42 196 aaPredicted RBP10.52□□□□□ -0.73
VPS52-220ENST00000493674 CTSZQ9UBR2 303 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 KIF25Q9UIL4 384 aa10.52□□□□□ -0.73
VPS52-220ENST00000493674 POLQO75417 2590 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 PDZD2O15018 2839 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 CSMD1Q96PZ7 3565 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 IGKV1-6A0A0C4DH72 117 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 ODAMA1E959 279 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 TRDCB7Z8K6 153 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 DISC1C4P0D8 188 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 NPIPB11E5RHQ5 1161 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 FABP7O15540 132 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 NDUFB6O95139 128 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 IGHV4-39P01824 125 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 PMP2P02689 132 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 TCRBP04435 133 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 GSTT2P0CG29 244 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 RCC1P18754 421 aaPredicted RBP10.51□□□□□ -0.73
VPS52-220ENST00000493674 GLIPR1P48060 266 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 TMEM33P57088 247 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 CHRFAM7AQ494W8 412 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms