RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 HES1Q14469 280 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 PIGYQ3MUY2 71 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 RSBN1Q5VWQ0 802 aaPredicted RBP13.2□□□□□ -0.3
PTPRU-208ENST00000493601 SLC16A12Q6ZSM3 486 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 C10orf67Q8IYJ2 551 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 OR8H3Q8N146 312 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 OR10A7Q8NGE5 316 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 OR51D1Q8NGF3 324 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 OR51A2Q8NGJ7 313 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 OR52I1Q8NGK6 324 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 MRGPRDQ8TDS7 321 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 GPR148Q8TDV2 347 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 LEAP2Q969E1 77 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 JAM3Q9BX67 310 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 MRPS18AQ9NVS2 196 aaKnown RBP13.2□□□□□ -0.3
PTPRU-208ENST00000493601 PSG11Q9UQ72 335 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 NPIPB11E5RHQ5 1161 aa13.19□□□□□ -0.3
PTPRU-208ENST00000493601 IGHV3-7P01780 117 aa13.19□□□□□ -0.3
PTPRU-208ENST00000493601 TMEM11P17152 192 aa13.19□□□□□ -0.3
PTPRU-208ENST00000493601 SOX2P48431 317 aa13.19□□□□□ -0.3
PTPRU-208ENST00000493601 GNG10P50151 68 aa13.19□□□□□ -0.3
PTPRU-208ENST00000493601 LTC4SQ16873 150 aa13.19□□□□□ -0.3
PTPRU-208ENST00000493601 CCDC58Q4VC31 144 aa13.19□□□□□ -0.3
PTPRU-208ENST00000493601 KLHL22Q53GT1 634 aa13.19□□□□□ -0.3
PTPRU-208ENST00000493601 DRAM1Q8N682 238 aa13.19□□□□□ -0.3
PTPRU-208ENST00000493601 Q8NFD4 153 aa13.19□□□□□ -0.3
PTPRU-208ENST00000493601 OR10K1Q8NGX5 313 aa13.19□□□□□ -0.3
PTPRU-208ENST00000493601 OR10X1Q8NGY0 326 aa13.19□□□□□ -0.3
PTPRU-208ENST00000493601 GPR61Q9BZJ8 451 aa13.19□□□□□ -0.3
PTPRU-208ENST00000493601 TAS2R4Q9NYW5 299 aa13.19□□□□□ -0.3
PTPRU-208ENST00000493601 COL7A1Q02388 2944 aa13.19□□□□□ -0.3
PTPRU-208ENST00000493601 LOC100130705A0A1B0GUX0 176 aa13.18□□□□□ -0.3
PTPRU-208ENST00000493601 FGF16O43320 207 aa13.18□□□□□ -0.3
PTPRU-208ENST00000493601 HTR3BO95264 441 aa13.18□□□□□ -0.3
PTPRU-208ENST00000493601 SSTR5P35346 364 aa13.18□□□□□ -0.3
PTPRU-208ENST00000493601 PPP3R1P63098 170 aa13.18□□□□□ -0.3
PTPRU-208ENST00000493601 NHLRC3Q5JS37 347 aa13.18□□□□□ -0.3
PTPRU-208ENST00000493601 ASCL4Q6XD76 172 aa13.18□□□□□ -0.3
PTPRU-208ENST00000493601 C5orf56Q8N8D9 126 aa13.18□□□□□ -0.3
PTPRU-208ENST00000493601 PLPPR1Q8TBJ4 325 aa13.18□□□□□ -0.3
PTPRU-208ENST00000493601 CHPT1Q8WUD6 406 aa13.18□□□□□ -0.3
PTPRU-208ENST00000493601 RGP1Q92546 391 aaPredicted RBP13.18□□□□□ -0.3
PTPRU-208ENST00000493601 TMEM106AQ96A25 262 aa13.18□□□□□ -0.3
PTPRU-208ENST00000493601 DPCDQ9BVM2 203 aaPredicted RBP13.18□□□□□ -0.3
PTPRU-208ENST00000493601 IFT22Q9H7X7 185 aa13.18□□□□□ -0.3
PTPRU-208ENST00000493601 FAM118AQ9NWS6 357 aa13.18□□□□□ -0.3
PTPRU-208ENST00000493601 IL36GQ9NZH8 169 aa13.18□□□□□ -0.3
PTPRU-208ENST00000493601 OR7C1O76099 320 aaPredicted RBP13.17□□□□□ -0.3
PTPRU-208ENST00000493601 LIMS3P0CW19 117 aa13.17□□□□□ -0.3
PTPRU-208ENST00000493601 LIMS4P0CW20 117 aa13.17□□□□□ -0.3
PTPRU-208ENST00000493601 GTF2A1P52655 376 aaPredicted RBP13.17□□□□□ -0.3
PTPRU-208ENST00000493601 RBM11P57052 281 aaKnown RBP13.17□□□□□ -0.3
PTPRU-208ENST00000493601 RPL23AP62750 156 aaKnown RBP13.17□□□□□ -0.3
PTPRU-208ENST00000493601 RPL22L1Q6P5R6 122 aaKnown RBP13.17□□□□□ -0.3
PTPRU-208ENST00000493601 LINC00596Q86U02 117 aa13.17□□□□□ -0.3
PTPRU-208ENST00000493601 ZNF329Q86UD4 541 aa13.17□□□□□ -0.3
PTPRU-208ENST00000493601 LINC00482Q8N8I6 264 aa13.17□□□□□ -0.3
PTPRU-208ENST00000493601 SUMF2Q8NBJ7 301 aa13.17□□□□□ -0.3
PTPRU-208ENST00000493601 RFESDQ8TAC1 157 aa13.17□□□□□ -0.3
PTPRU-208ENST00000493601 DPF1Q92782 380 aa13.17□□□□□ -0.3
PTPRU-208ENST00000493601 METTL9Q9H1A3 318 aa13.17□□□□□ -0.3
PTPRU-208ENST00000493601 TMEM138Q9NPI0 162 aa13.17□□□□□ -0.3
PTPRU-208ENST00000493601 PAK1IP1Q9NWT1 392 aaPredicted RBP13.17□□□□□ -0.3
PTPRU-208ENST00000493601 ST3GAL6Q9Y274 331 aa13.17□□□□□ -0.3
PTPRU-208ENST00000493601 TMEM30CPA0ZSE6 113 aa13.16□□□□□ -0.3
PTPRU-208ENST00000493601 SERPINE3A8MV23 424 aa13.16□□□□□ -0.3
PTPRU-208ENST00000493601 K7EIL1 84 aa13.16□□□□□ -0.3
PTPRU-208ENST00000493601 HSD17B6O14756 317 aa13.16□□□□□ -0.3
PTPRU-208ENST00000493601 CDRT1O95170 752 aa13.16□□□□□ -0.3
PTPRU-208ENST00000493601 IGKV1D-33P01593 117 aa13.16□□□□□ -0.3
PTPRU-208ENST00000493601 IGKV1-33P01594 117 aa13.16□□□□□ -0.3
PTPRU-208ENST00000493601 CSTBP04080 98 aaKnown RBP13.16□□□□□ -0.3
PTPRU-208ENST00000493601 SLC6A1P30531 599 aa13.16□□□□□ -0.3
PTPRU-208ENST00000493601 ZNF816Q0VGE8 651 aaPredicted RBP13.16□□□□□ -0.3
PTPRU-208ENST00000493601 DIAPH2-AS1Q14236 149 aa13.16□□□□□ -0.3
PTPRU-208ENST00000493601 HNF4GQ14541 408 aa13.16□□□□□ -0.3
PTPRU-208ENST00000493601 DDI2Q5TDH0 399 aa13.16□□□□□ -0.3
PTPRU-208ENST00000493601 TMPRSS11AQ6ZMR5 421 aa13.16□□□□□ -0.3
PTPRU-208ENST00000493601 COMMD1Q8N668 190 aa13.16□□□□□ -0.3
PTPRU-208ENST00000493601 OR52N1Q8NH53 320 aa13.16□□□□□ -0.3
PTPRU-208ENST00000493601 APH1BQ8WW43 257 aa13.16□□□□□ -0.3
PTPRU-208ENST00000493601 S100A13Q99584 98 aa13.16□□□□□ -0.3
PTPRU-208ENST00000493601 FGF20Q9NP95 211 aaPredicted RBP13.16□□□□□ -0.3
PTPRU-208ENST00000493601 TRAV39A0A0B4J263 110 aa13.15□□□□□ -0.3
PTPRU-208ENST00000493601 GZMHP20718 246 aa13.15□□□□□ -0.3
PTPRU-208ENST00000493601 ZNF93P35789 620 aaPredicted RBP13.15□□□□□ -0.3
PTPRU-208ENST00000493601 SLC35B1P78383 322 aa13.15□□□□□ -0.3
PTPRU-208ENST00000493601 EGFEM1PQ0D2K5 195 aa13.15□□□□□ -0.3
PTPRU-208ENST00000493601 MPV17LQ2QL34 196 aa13.15□□□□□ -0.3
PTPRU-208ENST00000493601 XAF1Q6GPH4 301 aa13.15□□□□□ -0.3
PTPRU-208ENST00000493601 ETV3LQ6ZN32 361 aa13.15□□□□□ -0.3
PTPRU-208ENST00000493601 SLC35E3Q7Z769 313 aa13.15□□□□□ -0.3
PTPRU-208ENST00000493601 FOXRED2Q8IWF2 684 aa13.15□□□□□ -0.3
PTPRU-208ENST00000493601 MRPL41Q8IXM3 137 aaKnown RBP13.15□□□□□ -0.3
PTPRU-208ENST00000493601 NOL4LQ96MY1 436 aaPredicted RBP13.15□□□□□ -0.3
PTPRU-208ENST00000493601 SLC29A1Q99808 456 aa13.15□□□□□ -0.3
PTPRU-208ENST00000493601 ING4Q9UNL4 249 aa13.15□□□□□ -0.3
PTPRU-208ENST00000493601 IGHV1-3A0A0C4DH29 117 aa13.14□□□□□ -0.31
PTPRU-208ENST00000493601 IRGMA1A4Y4 181 aa13.14□□□□□ -0.31
PTPRU-208ENST00000493601 NUDT19A8MXV4 375 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms