RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ZNF684Q5T5D7 378 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 ASPHD1Q5U4P2 390 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 GLT8D1Q68CQ7 371 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 KDM4DQ6B0I6 523 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 GDPGP1Q6ZNW5 385 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 Q75L30 129 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 C15orf54Q8N8G6 183 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 FER1L6-AS1Q8NA97 138 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 SYT8Q8NBV8 401 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 OR4K5Q8NGD3 323 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 JOSD2Q8TAC2 188 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 ARPC1AQ92747 370 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 MALSU1Q96EH3 234 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 TBX15Q96SF7 602 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 ADAT1Q9BUB4 502 aaKnown RBP3.51□□□□□ -1.85
BRCA1-220ENST00000492859 TMEM222Q9H0R3 208 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 RBKSQ9H477 322 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 ISG20L2Q9H9L3 353 aaKnown RBP3.51□□□□□ -1.85
BRCA1-220ENST00000492859 MEPEQ9NQ76 525 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-220ENST00000492859 CBLN4Q9NTU7 201 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 PCYT1BQ9Y5K3 369 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-220ENST00000492859 SPATA31D1Q6ZQQ2 1576 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 ZCCHC11Q5TAX3 1644 aaKnown RBP3.51□□□□□ -1.85
BRCA1-220ENST00000492859 MAP2P11137 1827 aaKnown RBP3.51□□□□□ -1.85
BRCA1-220ENST00000492859 MYH7BA7E2Y1 1941 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 HECW2Q9P2P5 1572 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 IGLV3-22A0A075B6J6 115 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 TRBV5-7A0A0A0MS05 114 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 TMEM269A0A1B0GVZ9 245 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 DUXBA0A1W2PPF3 345 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-220ENST00000492859 FCN1O00602 326 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 PDCD5O14737 125 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 AIFM1O95831 613 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 MAS1P04201 325 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 OR4Q2P0C623 313 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 CXCL2P19875 107 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 COX5AP20674 150 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 CNTFRP26992 372 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 TSPOP30536 169 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 GPR183P32249 361 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 CTRLP40313 264 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 LHX2P50458 406 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 APOC4P55056 127 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 GP2P55259 537 aaKnown RBP3.51□□□□□ -1.85
BRCA1-220ENST00000492859 CX3CL1P78423 397 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 RPL24P83731 157 aaKnown RBP3.51□□□□□ -1.85
BRCA1-220ENST00000492859 MEF2BQ02080 365 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-220ENST00000492859 CRHR2Q13324 411 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 PMAIP1Q13794 54 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 IHHQ14623 411 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 OPCMLQ14982 345 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 GAGE13Q4V321 117 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 MRPL55Q7Z7F7 128 aaKnown RBP3.51□□□□□ -1.85
BRCA1-220ENST00000492859 PPP1R27Q86WC6 154 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 GKN2Q86XP6 184 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 SLC22A18ASQ8N1D0 253 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 TMEM86AQ8N2M4 240 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 COX18Q8N8Q8 333 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 C5orf17Q8NAS9 161 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 GPR26Q8NDV2 337 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 OR11H6Q8NGC7 330 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 OR10D4PQ8NGN7 298 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 MFSD8Q8NHS3 518 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 ZNF519Q8TB69 540 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 HYLS1Q96M11 299 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 LYSMD1Q96S90 227 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 SORT1Q99523 831 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 KIR2DL4Q99706 377 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 HSD17B10Q99714 261 aaKnown RBP3.51□□□□□ -1.85
BRCA1-220ENST00000492859 PBDC1Q9BVG4 233 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 ZNF436Q9C0F3 470 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-220ENST00000492859 OR2H1Q9GZK4 316 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 OR8D2Q9GZM6 311 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 R4GN57 208 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 CCDC88AQ3V6T2 1871 aa3.5□□□□□ -1.85
BRCA1-220ENST00000492859 ABCA3Q99758 1704 aa3.5□□□□□ -1.85
BRCA1-220ENST00000492859 EPRSP07814 1512 aaKnown RBP3.5□□□□□ -1.85
BRCA1-220ENST00000492859 NRXN1Q9ULB1 1477 aa3.5□□□□□ -1.85
BRCA1-220ENST00000492859 SHANK2Q9UPX8 1470 aa3.5□□□□□ -1.85
BRCA1-220ENST00000492859 NFASCO94856 1347 aa3.5□□□□□ -1.85
BRCA1-220ENST00000492859 hADV38S2A0JD32 116 aa3.5□□□□□ -1.85
BRCA1-220ENST00000492859 GAGE12HA6NDE8 117 aa3.5□□□□□ -1.85
BRCA1-220ENST00000492859 COLCA2A8K830 154 aa3.5□□□□□ -1.85
BRCA1-220ENST00000492859 LYRM9A8MSI8 78 aa3.5□□□□□ -1.85
BRCA1-220ENST00000492859 H7C1C5 153 aa3.5□□□□□ -1.85
BRCA1-220ENST00000492859 EDIL3O43854 480 aa3.5□□□□□ -1.85
BRCA1-220ENST00000492859 FGF17O60258 216 aa3.5□□□□□ -1.85
BRCA1-220ENST00000492859 ZNF354AO60765 605 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-220ENST00000492859 SNAPC5O75971 98 aa3.5□□□□□ -1.85
BRCA1-220ENST00000492859 NEURL1O76050 574 aa3.5□□□□□ -1.85
BRCA1-220ENST00000492859 OR2H2O95918 312 aa3.5□□□□□ -1.85
BRCA1-220ENST00000492859 APOHP02749 345 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-220ENST00000492859 FAM106CPP0CH98 169 aa3.5□□□□□ -1.85
BRCA1-220ENST00000492859 ZNF14P17017 642 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-220ENST00000492859 GGT1P19440 569 aa3.5□□□□□ -1.85
BRCA1-220ENST00000492859 NTF3P20783 257 aa3.5□□□□□ -1.85
BRCA1-220ENST00000492859 ATP6V0CP27449 155 aa3.5□□□□□ -1.85
BRCA1-220ENST00000492859 IL2RGP31785 369 aa3.5□□□□□ -1.85
BRCA1-220ENST00000492859 FABP6P51161 128 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms