RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 SCN2BO60939 215 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 NDUFS6O75380 124 aaKnown RBP1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 LIMS3P0CW19 117 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 LIMS4P0CW20 117 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 CD151P48509 253 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 FOXA1P55317 472 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 RHOAP61586 193 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 PMS2P3Q13401 168 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 KRTAP25-1Q3LHN0 102 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 DEFB134Q4QY38 66 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 AMMECR1LQ6DCA0 310 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 BRD3OSQ6XYD6 125 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 Q6ZQT7 251 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 USP50Q70EL3 339 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 SSX7Q7RTT5 188 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 FAM19A3Q7Z5A8 133 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 KRTAP13-1Q8IUC0 172 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 ZNF664Q8N3J9 261 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 C3orf22Q8N5N4 141 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 CLDN23Q96B33 292 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 TVP23CQ96ET8 276 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 REEP6Q96HR9 211 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 TSSK6Q9BXA6 273 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 EBPLQ9BY08 206 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 OR51E2Q9H255 320 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 CD300AQ9UGN4 299 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 ZNF391Q9UJN7 358 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 POMPQ9Y244 141 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 MAP3K19Q56UN5 1328 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 ATRNO75882 1429 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 A0A1B0GTI1 187 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 OR5H14A6NHG9 310 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 TRPC5OSA6NMA1 111 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 D6RAR5 112 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 F8VZ95 297 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 H3BMM0 161 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 J3QLI3 93 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 FGF16O43320 207 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 MPZL2O60487 215 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 CPSF4O95639 269 aaKnown RBP1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 PDYNP01213 254 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 IGLV6-57P01721 117 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 IGHMP01871 453 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 GABRA1P14867 456 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 AKR1C4P17516 323 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 PRPS1L1P21108 318 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 S100A2P29034 98 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 CBX5P45973 191 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 CASP8Q14790 479 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 MMDQ15546 238 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 ZNF141Q15928 474 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 SPIN3Q5JUX0 258 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 TIMM23BQ5SRD1 257 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 CPNE9Q8IYJ1 553 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 MUC15Q8N387 334 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 BPIFB6Q8NFQ5 453 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 UBE2WQ96B02 151 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 CMBLQ96DG6 245 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 TMEM56Q96MV1 263 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 B9D2Q9BPU9 175 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 OR2D2Q9H210 308 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 CHMP4BQ9H444 224 aaKnown RBP1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 DUSP21Q9H596 190 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 ASCL3Q9NQ33 180 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 ASF1BQ9NVP2 202 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 ZNF230Q9UIE0 474 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 ZNF443Q9Y2A4 671 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 CARHSP1Q9Y2V2 147 aaKnown RBP1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 ZBED9Q6R2W3 1325 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 KIAA0232Q92628 1395 aa1.32□□□□□ -2.2
HMGB1P30-201ENST00000492455 A0A0B4J2C4 111 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 A6NED7 52 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 SMLR1H3BR10 107 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 GPR171O14626 319 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 PHYHO14832 338 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 PSIP1O75475 530 aaKnown RBP1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 GPR75O95800 540 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 IGKV4-1P06312 121 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 RD3LP0DJH9 198 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 CTLA4P16410 223 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 ZNF708P17019 499 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 ZNF3P17036 446 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 LGALS3P17931 250 aaKnown RBP1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 ATF1P18846 271 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 EVI2BP34910 448 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 STC1P52823 247 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 MP68P56378 58 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 RAB8AP61006 207 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 FAM3AP98173 230 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 IHHQ14623 411 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 BCL2A1Q16548 175 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 LGALSLQ3ZCW2 172 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 ZCWPW2Q504Y3 356 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 HES3Q5TGS1 186 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 OLIG3Q7RTU3 272 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 LYPD6Q86Y78 171 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 BOD1L2Q8IYS8 172 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 KRTCAP2Q8N6L1 136 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 OR4A5Q8NH83 315 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 DYNC2LI1Q8TCX1 351 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms