RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 HOXB1P14653 301 aaPredicted RBP19.41■□□□□ 0.7
USF3-203ENST00000491165 PVALBP20472 110 aaPredicted RBP19.41■□□□□ 0.7
USF3-203ENST00000491165 CAV2P51636 162 aa19.41■□□□□ 0.7
USF3-203ENST00000491165 SNAI3Q3KNW1 292 aa19.41■□□□□ 0.7
USF3-203ENST00000491165 KRTAP27-1Q3LI81 207 aa19.41■□□□□ 0.7
USF3-203ENST00000491165 RNASE6Q93091 150 aaKnown RBP19.41■□□□□ 0.7
USF3-203ENST00000491165 GPR173Q9NS66 373 aa19.41■□□□□ 0.7
USF3-203ENST00000491165 ANXA10Q9UJ72 324 aa19.41■□□□□ 0.7
USF3-203ENST00000491165 EDARQ9UNE0 448 aa19.41■□□□□ 0.7
USF3-203ENST00000491165 CLDN14O95500 239 aa19.4■□□□□ 0.7
USF3-203ENST00000491165 MTCP1P56278 107 aa19.4■□□□□ 0.7
USF3-203ENST00000491165 SMCO1Q147U7 214 aa19.4■□□□□ 0.7
USF3-203ENST00000491165 ZNF808Q8N4W9 903 aaPredicted RBP19.4■□□□□ 0.7
USF3-203ENST00000491165 SGK3Q96BR1 496 aa19.4■□□□□ 0.7
USF3-203ENST00000491165 WFIKKN1Q96NZ8 548 aa19.4■□□□□ 0.7
USF3-203ENST00000491165 HDHD3Q9BSH5 251 aaPredicted RBP19.4■□□□□ 0.7
USF3-203ENST00000491165 METTL9Q9H1A3 318 aa19.4■□□□□ 0.7
USF3-203ENST00000491165 CRYM-AS1A6NIL9 109 aa19.4■□□□□ 0.7
USF3-203ENST00000491165 K7EPK0 472 aa19.4■□□□□ 0.7
USF3-203ENST00000491165 MED6O75586 246 aa19.4■□□□□ 0.7
USF3-203ENST00000491165 IFNA21P01568 189 aa19.4■□□□□ 0.7
USF3-203ENST00000491165 RPL12P30050 165 aaKnown RBP19.4■□□□□ 0.7
USF3-203ENST00000491165 FAM71E2Q8N5Q1 922 aa19.4■□□□□ 0.7
USF3-203ENST00000491165 SPSB1Q96BD6 273 aa19.4■□□□□ 0.7
USF3-203ENST00000491165 POM121L2Q96KW2 1035 aa19.4■□□□□ 0.7
USF3-203ENST00000491165 NRIP2Q9BQI9 281 aa19.4■□□□□ 0.7
USF3-203ENST00000491165 MLXQ9UH92 298 aa19.4■□□□□ 0.7
USF3-203ENST00000491165 LRRK2Q5S007 2527 aa19.4■□□□□ 0.7
USF3-203ENST00000491165 F12P00748 615 aaPredicted RBP19.39■□□□□ 0.69
USF3-203ENST00000491165 CST4P01036 141 aa19.39■□□□□ 0.69
USF3-203ENST00000491165 MUC1P15941 1255 aaPredicted RBP19.39■□□□□ 0.69
USF3-203ENST00000491165 RCC1P18754 421 aaPredicted RBP19.39■□□□□ 0.69
USF3-203ENST00000491165 AGAP20933 346 aa19.39■□□□□ 0.69
USF3-203ENST00000491165 CCNOP22674 350 aa19.39■□□□□ 0.69
USF3-203ENST00000491165 SAV1Q9H4B6 383 aaPredicted RBP19.39■□□□□ 0.69
USF3-203ENST00000491165 DECR2Q9NUI1 292 aa19.39■□□□□ 0.69
USF3-203ENST00000491165 AMDHD2Q9Y303 409 aa19.39■□□□□ 0.69
USF3-203ENST00000491165 FAM96BQ9Y3D0 163 aa19.39■□□□□ 0.69
USF3-203ENST00000491165 LRBAP50851 2863 aa19.39■□□□□ 0.69
USF3-203ENST00000491165 HRNRQ86YZ3 2850 aaPredicted RBP19.39■□□□□ 0.69
USF3-203ENST00000491165 C5orf49A4QMS7 147 aa19.39■□□□□ 0.69
USF3-203ENST00000491165 DEDDO75618 318 aa19.39■□□□□ 0.69
USF3-203ENST00000491165 CBR1P16152 277 aa19.39■□□□□ 0.69
USF3-203ENST00000491165 LPAR6P43657 344 aa19.39■□□□□ 0.69
USF3-203ENST00000491165 SULT1A2P50226 295 aa19.39■□□□□ 0.69
USF3-203ENST00000491165 DPPA2Q7Z7J5 298 aa19.39■□□□□ 0.69
USF3-203ENST00000491165 CPNE2Q96FN4 548 aaPredicted RBP19.39■□□□□ 0.69
USF3-203ENST00000491165 OBP2BQ9NPH6 170 aa19.39■□□□□ 0.69
USF3-203ENST00000491165 RCC2Q9P258 522 aaKnown RBP19.39■□□□□ 0.69
USF3-203ENST00000491165 CRYBG3Q68DQ2 2970 aa19.38■□□□□ 0.69
USF3-203ENST00000491165 IGHV1-18A0A0C4DH31 117 aa19.38■□□□□ 0.69
USF3-203ENST00000491165 IGLV1-44P01699 117 aa19.38■□□□□ 0.69
USF3-203ENST00000491165 CECR9P0C854 216 aa19.38■□□□□ 0.69
USF3-203ENST00000491165 OR5H8P0DN80 308 aa19.38■□□□□ 0.69
USF3-203ENST00000491165 PLA2G2AP14555 144 aa19.38■□□□□ 0.69
USF3-203ENST00000491165 NPBWR1P48145 328 aa19.38■□□□□ 0.69
USF3-203ENST00000491165 SPTAN1Q13813 2472 aaKnown RBP19.38■□□□□ 0.69
USF3-203ENST00000491165 RSU1Q15404 277 aa19.38■□□□□ 0.69
USF3-203ENST00000491165 LINC01560Q8TB33 94 aa19.38■□□□□ 0.69
USF3-203ENST00000491165 C19orf84I3L1E1 186 aa19.37■□□□□ 0.69
USF3-203ENST00000491165 GAPDHP04406 335 aaKnown RBP19.37■□□□□ 0.69
USF3-203ENST00000491165 ACKR3P25106 362 aa19.37■□□□□ 0.69
USF3-203ENST00000491165 ZNF83P51522 516 aa19.37■□□□□ 0.69
USF3-203ENST00000491165 TMEM268Q5VZI3 342 aa19.37■□□□□ 0.69
USF3-203ENST00000491165 GGNBP1Q5YKI7 109 aa19.37■□□□□ 0.69
USF3-203ENST00000491165 MUCL1Q96DR8 90 aa19.37■□□□□ 0.69
USF3-203ENST00000491165 HSF4Q9ULV5 492 aa19.37■□□□□ 0.69
USF3-203ENST00000491165 HELZ2Q9BYK8 2649 aaKnown RBP19.37■□□□□ 0.69
USF3-203ENST00000491165 ANGPTL7O43827 346 aa19.37■□□□□ 0.69
USF3-203ENST00000491165 JTBO76095 146 aa19.37■□□□□ 0.69
USF3-203ENST00000491165 FCGR2CP31995 323 aa19.37■□□□□ 0.69
USF3-203ENST00000491165 CNN3Q15417 329 aaKnown RBP19.37■□□□□ 0.69
USF3-203ENST00000491165 LINC00518Q8N0U6 118 aa19.37■□□□□ 0.69
USF3-203ENST00000491165 OR2AE1Q8NHA4 323 aa19.37■□□□□ 0.69
USF3-203ENST00000491165 REEP6Q96HR9 211 aa19.37■□□□□ 0.69
USF3-203ENST00000491165 FAAP24Q9BTP7 215 aa19.37■□□□□ 0.69
USF3-203ENST00000491165 NECAP2Q9NVZ3 263 aa19.37■□□□□ 0.69
USF3-203ENST00000491165 FBXL17Q9UF56 701 aa19.37■□□□□ 0.69
USF3-203ENST00000491165 AK3Q9UIJ7 227 aa19.37■□□□□ 0.69
USF3-203ENST00000491165 FAM230AA0A1W2PPH8 454 aa19.36■□□□□ 0.69
USF3-203ENST00000491165 PLP2Q04941 152 aa19.36■□□□□ 0.69
USF3-203ENST00000491165 TAF9Q16594 264 aa19.36■□□□□ 0.69
USF3-203ENST00000491165 MRPL24Q96A35 216 aaKnown RBP19.36■□□□□ 0.69
USF3-203ENST00000491165 KLF2Q9Y5W3 355 aaPredicted RBP19.36■□□□□ 0.69
USF3-203ENST00000491165 RNASEK-C17orf49H0YIS7 233 aa19.36■□□□□ 0.69
USF3-203ENST00000491165 SPRY1O43609 319 aaPredicted RBP19.36■□□□□ 0.69
USF3-203ENST00000491165 COX5BP10606 129 aa19.36■□□□□ 0.69
USF3-203ENST00000491165 DTYMKP23919 212 aa19.36■□□□□ 0.69
USF3-203ENST00000491165 WNT5AP41221 380 aa19.36■□□□□ 0.69
USF3-203ENST00000491165 CMSS1Q9BQ75 279 aaKnown RBP19.36■□□□□ 0.69
USF3-203ENST00000491165 PARP11Q9NR21 331 aa19.36■□□□□ 0.69
USF3-203ENST00000491165 ZFP57Q9NU63 452 aa19.36■□□□□ 0.69
USF3-203ENST00000491165 ATPIF1Q9UII2 106 aa19.36■□□□□ 0.69
USF3-203ENST00000491165 LSM5Q9Y4Y9 91 aaKnown RBP19.36■□□□□ 0.69
USF3-203ENST00000491165 ZNF850A8MQ14 1090 aa19.35■□□□□ 0.69
USF3-203ENST00000491165 NGFP01138 241 aa19.35■□□□□ 0.69
USF3-203ENST00000491165 PRKACAP17612 351 aa19.35■□□□□ 0.69
USF3-203ENST00000491165 PIGPP57054 158 aa19.35■□□□□ 0.69
USF3-203ENST00000491165 BTNL8Q6UX41 500 aa19.35■□□□□ 0.69
USF3-203ENST00000491165 WFDC8Q8IUA0 241 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms