RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 A0A1W2PPR1 153 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 CREBL2O60519 120 aaPredicted RBP11.68□□□□□ -0.54
SMPD4-219ENST00000491128 CLDN14O95500 239 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 PRDX2P32119 198 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 GLIPR1P48060 266 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 DHRS2Q13268 280 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 SMIM21Q3B7S5 101 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 METTL11BQ5VVY1 283 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 DECR2Q9NUI1 292 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 NECAP2Q9NVZ3 263 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 IL19Q9UHD0 177 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 KIF25Q9UIL4 384 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 BOLA1Q9Y3E2 137 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 WIPI2Q9Y4P8 454 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 CCSO14618 274 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 FABP7O15540 132 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 TBPP20226 339 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 RAG2P55895 527 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 SLC9A3R2Q15599 337 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 Q5BKY6 102 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 ZNF626Q68DY1 528 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 FAM219AQ8IW50 185 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 ARRDC1Q8N5I2 433 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 RTBDNQ9BSG5 229 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-219ENST00000491128 SHARPINQ9H0F6 387 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 SAP30LQ9HAJ7 183 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 SPACA1Q9HBV2 294 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 OR1A1Q9P1Q5 309 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 EDARQ9UNE0 448 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 LRRK2Q5S007 2527 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 GYPAP02724 150 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 AADACP22760 399 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 ACTBL2Q562R1 376 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 BEX5Q5H9J7 111 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 SPIN3Q5JUX0 258 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 ZNF660Q6AZW8 331 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-219ENST00000491128 LHFPL1Q86WI0 220 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 MUC15Q8N387 334 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 OR11L1Q8NGX0 322 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 RFESDQ8TAC1 157 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 TMEM230Q96A57 120 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 LRRC46Q96FV0 321 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 COQ2Q96H96 371 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 MGAT4CQ9UBM8 478 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 ZDHHC8Q9ULC8 765 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 GPR132Q9UNW8 380 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 FAM208BQ5VWN6 2430 aa11.67□□□□□ -0.54
SMPD4-219ENST00000491128 TNFSF4P23510 183 aa11.66□□□□□ -0.54
SMPD4-219ENST00000491128 APOBEC3AP31941 199 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-219ENST00000491128 RBM39Q14498 530 aaKnown RBP11.66□□□□□ -0.54
SMPD4-219ENST00000491128 LTC4SQ16873 150 aa11.66□□□□□ -0.54
SMPD4-219ENST00000491128 PHLDA2Q53GA4 152 aa11.66□□□□□ -0.54
SMPD4-219ENST00000491128 FIP1L1Q6UN15 594 aaKnown RBP11.66□□□□□ -0.54
SMPD4-219ENST00000491128 KCTD9Q7L273 389 aa11.66□□□□□ -0.54
SMPD4-219ENST00000491128 LINC00596Q86U02 117 aa11.66□□□□□ -0.54
SMPD4-219ENST00000491128 FAM90A1Q86YD7 464 aa11.66□□□□□ -0.54
SMPD4-219ENST00000491128 PARP12Q9H0J9 701 aaKnown RBP11.66□□□□□ -0.54
SMPD4-219ENST00000491128 CENPEQ02224 2701 aa11.66□□□□□ -0.54
SMPD4-219ENST00000491128 MEIKINA0A087WXM9 373 aa11.66□□□□□ -0.54
SMPD4-219ENST00000491128 LOXP28300 417 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-219ENST00000491128 OR3A1P47881 315 aa11.66□□□□□ -0.54
SMPD4-219ENST00000491128 IL13RA1P78552 427 aa11.66□□□□□ -0.54
SMPD4-219ENST00000491128 MZT1Q08AG7 82 aa11.66□□□□□ -0.54
SMPD4-219ENST00000491128 GRK1Q15835 563 aa11.66□□□□□ -0.54
SMPD4-219ENST00000491128 DCAF12L2Q5VW00 463 aa11.66□□□□□ -0.54
SMPD4-219ENST00000491128 ZNF497Q6ZNH5 498 aa11.66□□□□□ -0.54
SMPD4-219ENST00000491128 MRGPRDQ8TDS7 321 aa11.66□□□□□ -0.54
SMPD4-219ENST00000491128 CCL13Q99616 98 aa11.66□□□□□ -0.54
SMPD4-219ENST00000491128 RNF7Q9UBF6 113 aa11.66□□□□□ -0.54
SMPD4-219ENST00000491128 MAB21L2Q9Y586 359 aa11.66□□□□□ -0.54
SMPD4-219ENST00000491128 ARFGEF3Q5TH69 2177 aa11.65□□□□□ -0.54
SMPD4-219ENST00000491128 TRDCB7Z8K6 153 aa11.65□□□□□ -0.54
SMPD4-219ENST00000491128 GOSR2O14653 212 aa11.65□□□□□ -0.54
SMPD4-219ENST00000491128 LHBP01229 141 aa11.65□□□□□ -0.54
SMPD4-219ENST00000491128 IGHV3-7P01780 117 aa11.65□□□□□ -0.54
SMPD4-219ENST00000491128 SORDQ00796 357 aa11.65□□□□□ -0.54
SMPD4-219ENST00000491128 SLC25A42Q86VD7 318 aa11.65□□□□□ -0.54
SMPD4-219ENST00000491128 GPN1Q9HCN4 374 aaPredicted RBP11.65□□□□□ -0.54
SMPD4-219ENST00000491128 IGKV1D-13A0A0B4J2D9 117 aa11.65□□□□□ -0.55
SMPD4-219ENST00000491128 FAM172BPA6NC97 362 aa11.65□□□□□ -0.55
SMPD4-219ENST00000491128 PRAF2O60831 178 aa11.65□□□□□ -0.55
SMPD4-219ENST00000491128 IGKV1-13P0DP09 117 aa11.65□□□□□ -0.55
SMPD4-219ENST00000491128 MECP2P51608 486 aaKnown RBP11.65□□□□□ -0.55
SMPD4-219ENST00000491128 H2BFSP57053 126 aa11.65□□□□□ -0.55
SMPD4-219ENST00000491128 SP6Q3SY56 376 aa11.65□□□□□ -0.55
SMPD4-219ENST00000491128 ZNF672Q499Z4 452 aaPredicted RBP11.65□□□□□ -0.55
SMPD4-219ENST00000491128 ZFP69Q49AA0 526 aa11.65□□□□□ -0.55
SMPD4-219ENST00000491128 FAM216BQ8N7L0 139 aa11.65□□□□□ -0.55
SMPD4-219ENST00000491128 IFT22Q9H7X7 185 aa11.65□□□□□ -0.55
SMPD4-219ENST00000491128 C9orf170A2RU37 121 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 IL5P05113 134 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 ACAA1P09110 424 aaPredicted RBP11.64□□□□□ -0.55
SMPD4-219ENST00000491128 SULT1A3P0DMM9 295 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 SULT1A4P0DMN0 295 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 SSTR5P35346 364 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 EDDM3BP56851 147 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 SMUG1Q53HV7 270 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 KRBOX4Q5JUW0 171 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 CD276Q5ZPR3 534 aa11.64□□□□□ -0.55
SMPD4-219ENST00000491128 LDLRAD3Q86YD5 345 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms