RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 KIF25Q9UIL4 384 aa15.42■□□□□ 0.06
MCF2L-230ENST00000491028 TEX15Q9BXT5 2789 aa15.42■□□□□ 0.06
MCF2L-230ENST00000491028 DSCAML1Q8TD84 2053 aa15.41■□□□□ 0.06
MCF2L-230ENST00000491028 MEIKINA0A087WXM9 373 aa15.41■□□□□ 0.06
MCF2L-230ENST00000491028 hADV38S2A0JD32 116 aa15.41■□□□□ 0.06
MCF2L-230ENST00000491028 KIAA1324LA8MWY0 1029 aaPredicted RBP15.41■□□□□ 0.06
MCF2L-230ENST00000491028 GABARAPH6UMI1 98 aa15.41■□□□□ 0.06
MCF2L-230ENST00000491028 PHF1O43189 567 aaPredicted RBP15.41■□□□□ 0.06
MCF2L-230ENST00000491028 LPLP06858 475 aa15.41■□□□□ 0.06
MCF2L-230ENST00000491028 FCGR3AP08637 254 aa15.41■□□□□ 0.06
MCF2L-230ENST00000491028 PTHLHP12272 177 aa15.41■□□□□ 0.06
MCF2L-230ENST00000491028 RPL31P62899 125 aaKnown RBP15.41■□□□□ 0.06
MCF2L-230ENST00000491028 LSAMPQ13449 338 aa15.41■□□□□ 0.06
MCF2L-230ENST00000491028 ZNF79Q15937 498 aa15.41■□□□□ 0.06
MCF2L-230ENST00000491028 ZNF880Q6PDB4 577 aa15.41■□□□□ 0.06
MCF2L-230ENST00000491028 TRAT1Q6PIZ9 186 aa15.41■□□□□ 0.06
MCF2L-230ENST00000491028 MFSD4AQ8N468 514 aa15.41■□□□□ 0.06
MCF2L-230ENST00000491028 TPRX1Q8N7U7 411 aa15.41■□□□□ 0.06
MCF2L-230ENST00000491028 GPX8Q8TED1 209 aa15.41■□□□□ 0.06
MCF2L-230ENST00000491028 DMRTB1Q96MA1 342 aa15.41■□□□□ 0.06
MCF2L-230ENST00000491028 HDHD3Q9BSH5 251 aaPredicted RBP15.41■□□□□ 0.06
MCF2L-230ENST00000491028 WDR12Q9GZL7 423 aaKnown RBP15.41■□□□□ 0.06
MCF2L-230ENST00000491028 MBNL3Q9NUK0 354 aaKnown RBP15.41■□□□□ 0.06
MCF2L-230ENST00000491028 ING3Q9NXR8 418 aa15.41■□□□□ 0.06
MCF2L-230ENST00000491028 RPUSD1Q9UJJ7 312 aaKnown RBP15.41■□□□□ 0.06
MCF2L-230ENST00000491028 ITGB1BP2Q9UKP3 347 aa15.41■□□□□ 0.06
MCF2L-230ENST00000491028 TRAPPC2LQ9UL33 140 aa15.41■□□□□ 0.06
MCF2L-230ENST00000491028 MGAT4AQ9UM21 535 aa15.41■□□□□ 0.06
MCF2L-230ENST00000491028 POLR3KQ9Y2Y1 108 aaPredicted RBP15.41■□□□□ 0.06
MCF2L-230ENST00000491028 LINC00312Q9Y6C7 94 aa15.41■□□□□ 0.06
MCF2L-230ENST00000491028 DOCK11Q5JSL3 2073 aa15.4■□□□□ 0.06
MCF2L-230ENST00000491028 LOC105371242A0A075B767 164 aa15.4■□□□□ 0.06
MCF2L-230ENST00000491028 TRGV10A0A0A0MS01 117 aa15.4■□□□□ 0.06
MCF2L-230ENST00000491028 FAM157AC9JC47 383 aa15.4■□□□□ 0.06
MCF2L-230ENST00000491028 GSTZ1O43708 216 aaPredicted RBP15.4■□□□□ 0.06
MCF2L-230ENST00000491028 SSX5O60225 188 aa15.4■□□□□ 0.06
MCF2L-230ENST00000491028 SRSF7Q16629 238 aaKnown RBP eCLIP15.4■□□□□ 0.06
MCF2L-230ENST00000491028 TRAPPC6BQ86SZ2 158 aa15.4■□□□□ 0.06
MCF2L-230ENST00000491028 ZNF554Q86TJ5 538 aa15.4■□□□□ 0.06
MCF2L-230ENST00000491028 OR4K15Q8NH41 348 aa15.4■□□□□ 0.06
MCF2L-230ENST00000491028 SMIM4Q8WVI0 70 aa15.4■□□□□ 0.06
MCF2L-230ENST00000491028 CORO2AQ92828 525 aa15.4■□□□□ 0.06
MCF2L-230ENST00000491028 GCDHQ92947 438 aaPredicted RBP15.4■□□□□ 0.06
MCF2L-230ENST00000491028 OCSTAMPQ9BR26 566 aa15.4■□□□□ 0.06
MCF2L-230ENST00000491028 C19orf12Q9NSK7 152 aa15.4■□□□□ 0.06
MCF2L-230ENST00000491028 UBE2J1Q9Y385 318 aaPredicted RBP15.4■□□□□ 0.06
MCF2L-230ENST00000491028 INHBBP09529 407 aa15.39■□□□□ 0.05
MCF2L-230ENST00000491028 GUCA2AQ02747 115 aa15.39■□□□□ 0.05
MCF2L-230ENST00000491028 ZNF846Q147U1 533 aa15.39■□□□□ 0.05
MCF2L-230ENST00000491028 CR1LQ2VPA4 569 aa15.39■□□□□ 0.05
MCF2L-230ENST00000491028 PYDC2Q56P42 97 aa15.39■□□□□ 0.05
MCF2L-230ENST00000491028 C6orf183Q5T699 404 aa15.39■□□□□ 0.05
MCF2L-230ENST00000491028 Q6ZS49 121 aa15.39■□□□□ 0.05
MCF2L-230ENST00000491028 FAM185AQ8N0U4 392 aa15.39■□□□□ 0.05
MCF2L-230ENST00000491028 GDPD1Q8N9F7 314 aa15.39■□□□□ 0.05
MCF2L-230ENST00000491028 ZNF565Q8N9K5 539 aa15.39■□□□□ 0.05
MCF2L-230ENST00000491028 LY6G5BQ8NDX9 201 aa15.39■□□□□ 0.05
MCF2L-230ENST00000491028 FCAMRQ8WWV6 532 aa15.39■□□□□ 0.05
MCF2L-230ENST00000491028 SRRQ9GZT4 340 aa15.39■□□□□ 0.05
MCF2L-230ENST00000491028 CR1P17927 2039 aa15.39■□□□□ 0.05
MCF2L-230ENST00000491028 PPIAL4CA0A0B4J2A2 164 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 A0A1W2PPH5 198 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 A0A1W2PQ09 198 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 MEIOCA2RUB1 952 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 B4DSR2 109 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 C22orf46C9J442 243 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 ENSAO43768 121 aaKnown RBP15.38■□□□□ 0.05
MCF2L-230ENST00000491028 PPIAL4GP0DN37 164 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 ZFP36P26651 326 aaKnown RBP15.38■□□□□ 0.05
MCF2L-230ENST00000491028 GLP1RP43220 463 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 ACTBP60709 375 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 ACTG1P63261 375 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 LCN2P80188 198 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 SSBP1Q04837 148 aaKnown RBP15.38■□□□□ 0.05
MCF2L-230ENST00000491028 TCF23Q7RTU1 214 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 OR13A1Q8NGR1 328 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 OR52I2Q8NH67 350 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 SETD6Q8TBK2 473 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 TSC22D3Q99576 134 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 Q9N2K0 584 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 RAB9BQ9NP90 201 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 IFT46Q9NQC8 304 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 TAS2R3Q9NYW6 316 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 OPN4Q9UHM6 478 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 ANAPC10Q9UM13 185 aa15.38■□□□□ 0.05
MCF2L-230ENST00000491028 IGHV2-70DA0A0C4DH43 119 aa15.37■□□□□ 0.05
MCF2L-230ENST00000491028 KIR2DS1A0A191URI9 304 aa15.37■□□□□ 0.05
MCF2L-230ENST00000491028 ZNF729A6NN14 1252 aaPredicted RBP15.37■□□□□ 0.05
MCF2L-230ENST00000491028 ORC5O43913 435 aa15.37■□□□□ 0.05
MCF2L-230ENST00000491028 LIPFP07098 398 aa15.37■□□□□ 0.05
MCF2L-230ENST00000491028 MSMBP08118 114 aa15.37■□□□□ 0.05
MCF2L-230ENST00000491028 GZMHP20718 246 aa15.37■□□□□ 0.05
MCF2L-230ENST00000491028 CD40LGP29965 261 aa15.37■□□□□ 0.05
MCF2L-230ENST00000491028 RCVRNP35243 200 aa15.37■□□□□ 0.05
MCF2L-230ENST00000491028 KIR2DS4P43632 304 aa15.37■□□□□ 0.05
MCF2L-230ENST00000491028 GZMKP49863 264 aa15.37■□□□□ 0.05
MCF2L-230ENST00000491028 DGCR2P98153 550 aa15.37■□□□□ 0.05
MCF2L-230ENST00000491028 KIR2DS1Q14954 304 aa15.37■□□□□ 0.05
MCF2L-230ENST00000491028 TMEM200BQ69YZ2 307 aa15.37■□□□□ 0.05
MCF2L-230ENST00000491028 Q6ZPA2 131 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms