RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 TCF23Q7RTU1 214 aa13.01□□□□□ -0.33
TRA2A-208ENST00000490942 BPIFB2Q8N4F0 458 aa13.01□□□□□ -0.33
TRA2A-208ENST00000490942 C11orf42Q8N5U0 333 aa13.01□□□□□ -0.33
TRA2A-208ENST00000490942 PLPPR1Q8TBJ4 325 aa13.01□□□□□ -0.33
TRA2A-208ENST00000490942 LGALS14Q8TCE9 139 aa13.01□□□□□ -0.33
TRA2A-208ENST00000490942 NEK7Q8TDX7 302 aa13.01□□□□□ -0.33
TRA2A-208ENST00000490942 TBX15Q96SF7 602 aa13.01□□□□□ -0.33
TRA2A-208ENST00000490942 NICN1Q9BSH3 213 aa13.01□□□□□ -0.33
TRA2A-208ENST00000490942 RAB9BQ9NP90 201 aa13.01□□□□□ -0.33
TRA2A-208ENST00000490942 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.01□□□□□ -0.33
TRA2A-208ENST00000490942 PLEKHJ1Q9NW61 149 aa13.01□□□□□ -0.33
TRA2A-208ENST00000490942 ETAA1Q9NY74 926 aa13.01□□□□□ -0.33
TRA2A-208ENST00000490942 ZNF581Q9P0T4 197 aa13.01□□□□□ -0.33
TRA2A-208ENST00000490942 ONECUT1Q9UBC0 465 aa13.01□□□□□ -0.33
TRA2A-208ENST00000490942 FN1P02751 2386 aaKnown RBP13.01□□□□□ -0.33
TRA2A-208ENST00000490942 MEIKINA0A087WXM9 373 aa13□□□□□ -0.33
TRA2A-208ENST00000490942 ZNF729A6NN14 1252 aaPredicted RBP13□□□□□ -0.33
TRA2A-208ENST00000490942 HSPB6O14558 160 aa13□□□□□ -0.33
TRA2A-208ENST00000490942 MT-ND4P03905 459 aa13□□□□□ -0.33
TRA2A-208ENST00000490942 CGB3P0DN86 165 aa13□□□□□ -0.33
TRA2A-208ENST00000490942 CGB7P0DN87 165 aa13□□□□□ -0.33
TRA2A-208ENST00000490942 VEGFCP49767 419 aa13□□□□□ -0.33
TRA2A-208ENST00000490942 TMEM50BP56557 158 aa13□□□□□ -0.33
TRA2A-208ENST00000490942 ERVFRD-1P60508 538 aa13□□□□□ -0.33
TRA2A-208ENST00000490942 TRAT1Q6PIZ9 186 aa13□□□□□ -0.33
TRA2A-208ENST00000490942 Q6ZTK2 550 aa13□□□□□ -0.33
TRA2A-208ENST00000490942 Q71RC1 249 aaPredicted RBP13□□□□□ -0.33
TRA2A-208ENST00000490942 Q8N7P7 452 aa13□□□□□ -0.33
TRA2A-208ENST00000490942 OR10A7Q8NGE5 316 aa13□□□□□ -0.33
TRA2A-208ENST00000490942 OR10R2Q8NGX6 335 aa13□□□□□ -0.33
TRA2A-208ENST00000490942 ISOC1Q96CN7 298 aa13□□□□□ -0.33
TRA2A-208ENST00000490942 RHBDL2Q9NX52 303 aa13□□□□□ -0.33
TRA2A-208ENST00000490942 NDUFA13Q9P0J0 144 aa13□□□□□ -0.33
TRA2A-208ENST00000490942 KIF25Q9UIL4 384 aa13□□□□□ -0.33
TRA2A-208ENST00000490942 CEPT1Q9Y6K0 416 aa13□□□□□ -0.33
TRA2A-208ENST00000490942 TRBV6-6A0A0A6YYG2 114 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 A0A0B4J203 849 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 SMIM31A0A1B0GVY4 71 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 SERPINE3A8MV23 424 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 SOCS1O15524 211 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 ORC5O43913 435 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 FAM157CP0CG43 387 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 SNRPBP14678 240 aaKnown RBP12.99□□□□□ -0.33
TRA2A-208ENST00000490942 ZNF182P17025 639 aaPredicted RBP12.99□□□□□ -0.33
TRA2A-208ENST00000490942 EFNB2P52799 333 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 TMEM30BQ3MIR4 351 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 NKAPLQ5M9Q1 402 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 HEPN1Q6WQI6 88 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 C9orf139Q6ZV77 190 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 C6orf201Q7Z4U5 140 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 VMO1Q7Z5L0 202 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 TRAPPC6BQ86SZ2 158 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 TPRX1Q8N7U7 411 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 NDNFQ8TB73 568 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 TNFRSF14Q92956 283 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 RAB3CQ96E17 227 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 SULT4A1Q9BR01 284 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 PCGF1Q9BSM1 259 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 RBM38Q9H0Z9 239 aaKnown RBP12.99□□□□□ -0.33
TRA2A-208ENST00000490942 ABCG5Q9H222 651 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 HEXA-AS1Q9H8Q6 139 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 MBNL3Q9NUK0 354 aaKnown RBP12.99□□□□□ -0.33
TRA2A-208ENST00000490942 NUP50Q9UKX7 468 aa12.99□□□□□ -0.33
TRA2A-208ENST00000490942 KBTBD11-OT1A0A1B0GTJ5 212 aa12.98□□□□□ -0.33
TRA2A-208ENST00000490942 NPIPB11E5RHQ5 1161 aa12.98□□□□□ -0.33
TRA2A-208ENST00000490942 H3BMQ9 156 aa12.98□□□□□ -0.33
TRA2A-208ENST00000490942 CLPXO76031 633 aa12.98□□□□□ -0.33
TRA2A-208ENST00000490942 NAPSAO96009 420 aa12.98□□□□□ -0.33
TRA2A-208ENST00000490942 PAHP00439 452 aa12.98□□□□□ -0.33
TRA2A-208ENST00000490942 CCL3L1P16619 93 aa12.98□□□□□ -0.33
TRA2A-208ENST00000490942 SRD5A1P18405 259 aa12.98□□□□□ -0.33
TRA2A-208ENST00000490942 SOX6P35712 828 aa12.98□□□□□ -0.33
TRA2A-208ENST00000490942 SRP14P37108 136 aaKnown RBP12.98□□□□□ -0.33
TRA2A-208ENST00000490942 C6orf183Q5T699 404 aa12.98□□□□□ -0.33
TRA2A-208ENST00000490942 GPR157Q5UAW9 335 aa12.98□□□□□ -0.33
TRA2A-208ENST00000490942 OR52W1Q6IF63 320 aa12.98□□□□□ -0.33
TRA2A-208ENST00000490942 MOB1BQ7L9L4 216 aa12.98□□□□□ -0.33
TRA2A-208ENST00000490942 ARHGAP5-AS1Q96IT6 56 aa12.98□□□□□ -0.33
TRA2A-208ENST00000490942 ATG5Q9H1Y0 275 aa12.98□□□□□ -0.33
TRA2A-208ENST00000490942 MGAT4AQ9UM21 535 aa12.98□□□□□ -0.33
TRA2A-208ENST00000490942 DSCAML1Q8TD84 2053 aa12.98□□□□□ -0.33
TRA2A-208ENST00000490942 A0A087X0M5 115 aa12.97□□□□□ -0.33
TRA2A-208ENST00000490942 A0A1B0GX30 115 aa12.97□□□□□ -0.33
TRA2A-208ENST00000490942 MFNGO00587 321 aa12.97□□□□□ -0.33
TRA2A-208ENST00000490942 IGHV1-8P0DP01 117 aa12.97□□□□□ -0.33
TRA2A-208ENST00000490942 HIST1H1DP16402 221 aaKnown RBP12.97□□□□□ -0.33
TRA2A-208ENST00000490942 PLA2G7Q13093 441 aa12.97□□□□□ -0.33
TRA2A-208ENST00000490942 SPCS2Q15005 226 aa12.97□□□□□ -0.33
TRA2A-208ENST00000490942 TUSC1Q2TAM9 212 aa12.97□□□□□ -0.33
TRA2A-208ENST00000490942 KLF17Q5JT82 389 aaPredicted RBP12.97□□□□□ -0.33
TRA2A-208ENST00000490942 PLAC9Q5JTB6 97 aa12.97□□□□□ -0.33
TRA2A-208ENST00000490942 UBE2NLQ5JXB2 153 aa12.97□□□□□ -0.33
TRA2A-208ENST00000490942 MZT2AQ6P582 158 aa12.97□□□□□ -0.33
TRA2A-208ENST00000490942 BRICD5Q6PL45 260 aa12.97□□□□□ -0.33
TRA2A-208ENST00000490942 OR13A1Q8NGR1 328 aa12.97□□□□□ -0.33
TRA2A-208ENST00000490942 OR5H6Q8NGV6 325 aa12.97□□□□□ -0.33
TRA2A-208ENST00000490942 PHF21AQ96BD5 680 aa12.97□□□□□ -0.33
TRA2A-208ENST00000490942 SLC25A38Q96DW6 304 aa12.97□□□□□ -0.33
TRA2A-208ENST00000490942 FAAP24Q9BTP7 215 aa12.97□□□□□ -0.33
TRA2A-208ENST00000490942 PECRQ9BY49 303 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms