RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 DLL3Q9NYJ7 618 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 SF3B6Q9Y3B4 125 aaKnown RBP12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 TLN1Q9Y490 2541 aaKnown RBP12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 SNRPGP15A8MWD9 76 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 CLDN14O95500 239 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 HBE1P02100 147 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 KLK2P20151 261 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 BSPH1Q075Z2 132 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 IL34Q6ZMJ4 242 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 NPAS1Q99742 590 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 HES4Q9HCC6 221 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 SPTBN4Q9H254 2564 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 NDUFA2O43678 99 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 IGHMP01871 453 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 RBM11P57052 281 aaKnown RBP12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 TESK1Q15569 626 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 Q6ZS92 163 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 UHRF2Q96PU4 802 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 NEURL2Q9BR09 285 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 PHF3Q92576 2039 aaKnown RBP12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 E5RGE8 158 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 K7ENP7 123 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 KLF4O43474 513 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 GIPP09681 153 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 FAM3AP98173 230 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 ENDOGQ14249 297 aaKnown RBP12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 OXA1LQ15070 435 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 BCL2L2Q92843 193 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 ATPIF1Q9UII2 106 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 NSG2Q9Y328 171 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 MPV17P39210 176 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 ZDHHC22Q8N966 263 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 OR4S2Q8NH73 311 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 DYRK2Q92630 601 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 RNF122Q9H9V4 155 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 HIF1ANQ9NWT6 349 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 A8MXE2 369 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 LMX1BO60663 402 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 FGF12P61328 243 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 SCGB2A2Q13296 93 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 SLC51BQ86UW2 128 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 TMEM104Q8NE00 496 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 ADGRG7Q96K78 797 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 CNTNAP3Q9BZ76 1288 aa12.41□□□□□ -0.42
ARHGEF39-205ENST00000490638 IGHV1-69-2A0A0G2JMI3 117 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 F6UZH7 168 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 NPIPB7O75200 414 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 NDUFB6O95139 128 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 CDH26Q8IXH8 852 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 OR2G3Q8NGZ4 309 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 VSTM2AQ8TAG5 236 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 FAM206AQ9NX38 181 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 LPAR3Q9UBY5 353 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 J3QW42 95 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 IFNL4K9M1U5 179 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 CST7O76096 145 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 CYB5R3P00387 301 aaPredicted RBP12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 RPL12P30050 165 aaKnown RBP12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 IL13RA2Q14627 380 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 FNDC7Q5VTL7 733 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 SPNS3Q6ZMD2 512 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 PXT1Q8NFP0 134 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 CCL19Q99731 98 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 BOLA1Q9Y3E2 137 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 A0A1W2PPE3 182 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 S100A2P29034 98 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 C1QTNF12Q5T7M4 302 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 LINC00114Q6XXX2 140 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 PPP1R1CQ8WVI7 109 aa12.4□□□□□ -0.42
ARHGEF39-205ENST00000490638 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 ADAM10O14672 748 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 PEA15Q15121 130 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 PIP4P1Q86T03 277 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 DPF1Q92782 380 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 THYN1Q9P016 225 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 TMED3Q9Y3Q3 217 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 A0A0A6YYJ9 748 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 PPYP01298 95 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 ISG15P05161 165 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 EFNB2P52799 333 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 TAGLNQ01995 201 aaKnown RBP12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 SFT2D1Q8WV19 159 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 PIMREGQ9BSJ6 248 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 TMUB1Q9BVT8 246 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 PLEKHA2Q9HB19 425 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 ASCL3Q9NQ33 180 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 PDLIM4P50479 330 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 ERVFRD-1P60508 538 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 HLA-DRB3P79483 266 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 ZNF596Q8TC21 504 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 HDHD3Q9BSH5 251 aaPredicted RBP12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 PARP12Q9H0J9 701 aaKnown RBP12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 BARX1Q9HBU1 254 aaPredicted RBP12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 C3orf85A0A1B0GTC6 90 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 C1QTNF9BB2RNN3 333 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 C1QTNF9P0C862 333 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 PPP1CCP36873 323 aaKnown RBP12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 REG1BP48304 166 aa12.39□□□□□ -0.43
ARHGEF39-205ENST00000490638 ARF6P62330 175 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms