RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 MTCP1P56278 107 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 MADCAM1Q13477 382 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 KIAA0141Q14154 515 aaPredicted RBP6.96□□□□□ -1.3
SRRM1-217ENST00000490543 EBI3Q14213 229 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 ATXN7L3Q14CW9 347 aaPredicted RBP6.96□□□□□ -1.3
SRRM1-217ENST00000490543 KRBOX4Q5JUW0 171 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 SPIN3Q5JUX0 258 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 FAM27D1Q5T7N8 215 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 Q6P435 159 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 TGIF2LXQ8IUE1 241 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 Q8IYB0 196 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 DEFB107AQ8IZN7 70 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 HS3ST5Q8IZT8 346 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 Q8N6K4 173 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 STPG3Q8N7X2 389 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 Q8N9W7 124 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 OR1N2Q8NGR9 330 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 RFESDQ8TAC1 157 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 DCUN1D4Q92564 292 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 RFT1Q96AA3 541 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 ISOC1Q96CN7 298 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 OR5B12Q96R08 314 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 CNN2Q99439 309 aaKnown RBP6.96□□□□□ -1.3
SRRM1-217ENST00000490543 HSPB9Q9BQS6 159 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 CHST5Q9GZS9 411 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 KLK15Q9H2R5 256 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 TMPRSS5Q9H3S3 457 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 CCDC134Q9H6E4 229 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 MOB1AQ9H8S9 216 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 GNB4Q9HAV0 340 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 PLEKHA1Q9HB21 404 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 EXOSC4Q9NPD3 245 aaKnown RBP6.96□□□□□ -1.3
SRRM1-217ENST00000490543 PCDHB16Q9NRJ7 776 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 PLSCR3Q9NRY6 295 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 TVP23BQ9NYZ1 205 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 ACTR3BQ9P1U1 418 aa6.96□□□□□ -1.3
SRRM1-217ENST00000490543 SIRT4Q9Y6E7 314 aaPredicted RBP6.96□□□□□ -1.3
SRRM1-217ENST00000490543 FUOMA2VDF0 154 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 I3L521 148 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 SLC33A1O00400 549 aaPredicted RBP6.95□□□□□ -1.3
SRRM1-217ENST00000490543 GATBO75879 557 aaKnown RBP6.95□□□□□ -1.3
SRRM1-217ENST00000490543 IGHG4P01861 327 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 GP9P14770 177 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 ZNF44P15621 663 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 PSMB8P28062 276 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 REG1BP48304 166 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 RBP2P50120 134 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 GNG10P50151 68 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 RAB7AP51149 207 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 ATP1B3P54709 279 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 GNB1P62873 340 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 SUMO1P63165 101 aaKnown RBP6.95□□□□□ -1.3
SRRM1-217ENST00000490543 MS4A2Q01362 244 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 PDZK1IP1Q13113 114 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 LTC4SQ16873 150 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 SSX6Q7RTT6 188 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 MOB3BQ86TA1 216 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 ZNF429Q86V71 674 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 CATSPERDQ86XM0 798 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 SLC35F2Q8IXU6 374 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 RDH10Q8IZV5 341 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 OR8H3Q8N146 312 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 OR13A1Q8NGR1 328 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 MYOZ3Q8TDC0 251 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 ELAC2Q9BQ52 826 aaKnown RBP6.95□□□□□ -1.3
SRRM1-217ENST00000490543 OSBPL10Q9BXB5 764 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 GON7Q9BXV9 100 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 COMMD4Q9H0A8 199 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 MAGIXQ9H6Y5 334 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 ADGRL4Q9HBW9 690 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 ISYNA1Q9NPH2 558 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 LIN7CQ9NUP9 197 aaKnown RBP6.95□□□□□ -1.3
SRRM1-217ENST00000490543 ARL8BQ9NVJ2 186 aa6.95□□□□□ -1.3
SRRM1-217ENST00000490543 AMMECR1Q9Y4X0 333 aaPredicted RBP6.95□□□□□ -1.3
SRRM1-217ENST00000490543 TRAV39A0A0B4J263 110 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 IGHV1-3A0A0C4DH29 117 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 ZNF736B4DX44 427 aaPredicted RBP6.94□□□□□ -1.3
SRRM1-217ENST00000490543 M0R129 80 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 LDLRAD4O15165 306 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 PRKYO43930 277 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 SAP30O75446 220 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 CYB5AP00167 134 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 SERPINA3P01011 423 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 CSN2P05814 226 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 GLP1RP43220 463 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 VEGFCP49767 419 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 ACTR3P61158 418 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 CDK5R1Q15078 307 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 SRSF7Q16629 238 aaKnown RBP eCLIP6.94□□□□□ -1.32e-6■■■□□ 16.9
SRRM1-217ENST00000490543 PRSS35Q8N3Z0 413 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 YIPF7Q8N8F6 280 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 ZNF491Q8N8L2 437 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 DNAAF1Q8NEP3 725 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 OR5D18Q8NGL1 313 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 HAVCR2Q8TDQ0 301 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 DLX4Q92988 240 aaPredicted RBP6.94□□□□□ -1.3
SRRM1-217ENST00000490543 ADAT3Q96EY9 351 aaPredicted RBP6.94□□□□□ -1.3
SRRM1-217ENST00000490543 KCTD7Q96MP8 289 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 SPACA5Q96QH8 159 aa6.94□□□□□ -1.3
SRRM1-217ENST00000490543 S1PR3Q99500 378 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms