RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 RBP4P02753 201 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 IGHV1-8P0DP01 117 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 FUT3P21217 361 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 CHATP28329 748 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 GDNFP39905 211 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 ALDH3B2P48448 385 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 BLMHQ13867 455 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 C17orf58Q2M2W7 97 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 UTF1Q5T230 341 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 ZNF497Q6ZNH5 498 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 SLC16A12Q6ZSM3 486 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 TRAPPC6BQ86SZ2 158 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 FAM89BQ8N5H3 189 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 BARHL1Q9BZE3 327 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 MS4A7Q9GZW8 240 aaPredicted RBP11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 NAA50Q9GZZ1 169 aaKnown RBP11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 NCOR1P1Q9H4R4 102 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 OCEL1Q9H607 264 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 SPACA1Q9HBV2 294 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 FUOMA2VDF0 154 aa11.73□□□□□ -0.53
SRGAP3-208ENST00000490348 VGLL3A8MV65 326 aa11.73□□□□□ -0.53
SRGAP3-208ENST00000490348 SOCS1O15524 211 aa11.73□□□□□ -0.53
SRGAP3-208ENST00000490348 OMGP23515 440 aa11.73□□□□□ -0.53
SRGAP3-208ENST00000490348 UBE2E1P51965 193 aa11.73□□□□□ -0.53
SRGAP3-208ENST00000490348 TIMM50Q3ZCQ8 353 aa11.73□□□□□ -0.53
SRGAP3-208ENST00000490348 PRAMEF5Q5TYX0 476 aa11.73□□□□□ -0.53
SRGAP3-208ENST00000490348 NCR3LG1Q68D85 454 aa11.73□□□□□ -0.53
SRGAP3-208ENST00000490348 SLC35E4Q6ICL7 350 aa11.73□□□□□ -0.53
SRGAP3-208ENST00000490348 SFXN4Q6P4A7 337 aa11.73□□□□□ -0.53
SRGAP3-208ENST00000490348 C6orf201Q7Z4U5 140 aa11.73□□□□□ -0.53
SRGAP3-208ENST00000490348 GAPTQ8N292 157 aa11.73□□□□□ -0.53
SRGAP3-208ENST00000490348 SIGLECL1Q8N7X8 197 aa11.73□□□□□ -0.53
SRGAP3-208ENST00000490348 AJUBAQ96IF1 538 aa11.73□□□□□ -0.53
SRGAP3-208ENST00000490348 SULT4A1Q9BR01 284 aa11.73□□□□□ -0.53
SRGAP3-208ENST00000490348 ESM1Q9NQ30 184 aa11.73□□□□□ -0.53
SRGAP3-208ENST00000490348 TENM1Q9UKZ4 2725 aa11.73□□□□□ -0.53
SRGAP3-208ENST00000490348 A0A0U1RQK1 487 aa11.72□□□□□ -0.53
SRGAP3-208ENST00000490348 UBE2QL1A1L167 161 aa11.72□□□□□ -0.53
SRGAP3-208ENST00000490348 MCRIP1C9JLW8 97 aa11.72□□□□□ -0.53
SRGAP3-208ENST00000490348 CLPXO76031 633 aa11.72□□□□□ -0.53
SRGAP3-208ENST00000490348 IFNA2P01563 188 aa11.72□□□□□ -0.53
SRGAP3-208ENST00000490348 MT-ND4P03905 459 aa11.72□□□□□ -0.53
SRGAP3-208ENST00000490348 COX7A1P24310 79 aa11.72□□□□□ -0.53
SRGAP3-208ENST00000490348 FPR2P25090 351 aa11.72□□□□□ -0.53
SRGAP3-208ENST00000490348 GLP1RP43220 463 aa11.72□□□□□ -0.53
SRGAP3-208ENST00000490348 TMEM50BP56557 158 aa11.72□□□□□ -0.53
SRGAP3-208ENST00000490348 BPIFB3P59826 476 aa11.72□□□□□ -0.53
SRGAP3-208ENST00000490348 SCGB2A2Q13296 93 aa11.72□□□□□ -0.53
SRGAP3-208ENST00000490348 DEFB112Q30KQ8 113 aa11.72□□□□□ -0.53
SRGAP3-208ENST00000490348 NKAPLQ5M9Q1 402 aa11.72□□□□□ -0.53
SRGAP3-208ENST00000490348 MRGPRDQ8TDS7 321 aa11.72□□□□□ -0.53
SRGAP3-208ENST00000490348 C17orf50Q8WW18 174 aa11.72□□□□□ -0.53
SRGAP3-208ENST00000490348 LINC00574Q9H8X3 128 aa11.72□□□□□ -0.53
SRGAP3-208ENST00000490348 TAS2R3Q9NYW6 316 aa11.72□□□□□ -0.53
SRGAP3-208ENST00000490348 OR6C3Q9NZP0 311 aa11.72□□□□□ -0.53
SRGAP3-208ENST00000490348 DAPK2Q9UIK4 370 aa11.72□□□□□ -0.53
SRGAP3-208ENST00000490348 KBTBD11-OT1A0A1B0GTJ5 212 aa11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 TMEM30CPA0ZSE6 113 aa11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 NPFFO15130 113 aa11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 VENTXO95231 258 aa11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 PAHP00439 452 aa11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 GLAP06280 429 aa11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 CDK2P24941 298 aa11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 BLVRBP30043 206 aaPredicted RBP11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 SSTR5P35346 364 aa11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 RPS19P39019 145 aaKnown RBP11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 NCS1P62166 190 aa11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 GUCA2AQ02747 115 aa11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 MOGAT2Q3SYC2 334 aa11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 HEPN1Q6WQI6 88 aa11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 Q6ZPA2 131 aa11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 USP43Q70EL4 1123 aa11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 NEK7Q8TDX7 302 aa11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 FAAP24Q9BTP7 215 aa11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 ETAA1Q9NY74 926 aa11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 SESN1Q9Y6P5 492 aa11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 ANK2Q01484 3957 aa11.71□□□□□ -0.53
SRGAP3-208ENST00000490348 STAB1Q9NY15 2570 aa11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 hCG_1809904A0A1W2PP81 198 aa11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 A0A1W2PPE2 198 aa11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 A0A1W2PR64 198 aa11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 A0A1W2PRV1 198 aa11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 TCF21O43680 179 aa11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 SNRPBP14678 240 aaKnown RBP11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 SAA4P35542 130 aa11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 VEGFCP49767 419 aa11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 HILS1P60008 231 aa11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 VBP1P61758 197 aa11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 RBM39Q14498 530 aaKnown RBP11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 CTF1Q16619 201 aa11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 PLAC9Q5JTB6 97 aa11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 LDLRAD2Q5SZI1 272 aa11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 ZNF565Q8N9K5 539 aa11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 CCDC107Q8WV48 283 aa11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 NEDD4LQ96PU5 975 aa11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 URM1Q9BTM9 101 aaKnown RBP11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 GAL3ST2Q9H3Q3 398 aa11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 PRDM13Q9H4Q3 707 aa11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 BATF3Q9NR55 127 aa11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 CALYQ9NYX4 217 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms