RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 PRKACAP17612 351 aa1.35□□□□□ -2.19
CCDC39-206ENST00000489868 CRABP1P29762 137 aa1.35□□□□□ -2.19
CCDC39-206ENST00000489868 RAB25P57735 213 aa1.35□□□□□ -2.19
CCDC39-206ENST00000489868 FAM229BQ4G0N7 80 aa1.35□□□□□ -2.19
CCDC39-206ENST00000489868 ACSBG2Q5FVE4 666 aa1.35□□□□□ -2.19
CCDC39-206ENST00000489868 ACTL10Q5JWF8 245 aa1.35□□□□□ -2.19
CCDC39-206ENST00000489868 SLC25A25Q6KCM7 469 aa1.35□□□□□ -2.19
CCDC39-206ENST00000489868 CLEC20AQ6ZU45 233 aa1.35□□□□□ -2.19
CCDC39-206ENST00000489868 GATD1Q8NB37 220 aa1.35□□□□□ -2.19
CCDC39-206ENST00000489868 RPRD1BQ9NQG5 326 aaKnown RBP1.35□□□□□ -2.19
CCDC39-206ENST00000489868 OR51B4Q9Y5P0 310 aa1.35□□□□□ -2.19
CCDC39-206ENST00000489868 ARAP3Q8WWN8 1544 aa1.35□□□□□ -2.19
CCDC39-206ENST00000489868 RP1L1Q8IWN7 2480 aaPredicted RBP1.34□□□□□ -2.19
CCDC39-206ENST00000489868 IGKV1-12A0A0C4DH73 117 aa1.34□□□□□ -2.19
CCDC39-206ENST00000489868 A0A1W2PQL4 384 aaPredicted RBP1.34□□□□□ -2.19
CCDC39-206ENST00000489868 IGSF23A1L1A6 192 aa1.34□□□□□ -2.19
CCDC39-206ENST00000489868 RFXANKO14593 260 aa1.34□□□□□ -2.19
CCDC39-206ENST00000489868 IGKV1D-12P01611 117 aa1.34□□□□□ -2.19
CCDC39-206ENST00000489868 MAGEA6P43360 314 aa1.34□□□□□ -2.19
CCDC39-206ENST00000489868 C2orf80Q0P641 193 aa1.34□□□□□ -2.19
CCDC39-206ENST00000489868 OR8G1Q15617 311 aa1.34□□□□□ -2.19
CCDC39-206ENST00000489868 RESP18Q5W5W9 173 aa1.34□□□□□ -2.19
CCDC39-206ENST00000489868 SSX7Q7RTT5 188 aa1.34□□□□□ -2.19
CCDC39-206ENST00000489868 FAM19A3Q7Z5A8 133 aa1.34□□□□□ -2.19
CCDC39-206ENST00000489868 FAM206AQ9NX38 181 aa1.34□□□□□ -2.19
CCDC39-206ENST00000489868 PSORS1C2Q9UIG4 136 aa1.34□□□□□ -2.19
CCDC39-206ENST00000489868 POMPQ9Y244 141 aa1.34□□□□□ -2.19
CCDC39-206ENST00000489868 COL4A1P02462 1669 aa1.34□□□□□ -2.19
CCDC39-206ENST00000489868 FLG2Q5D862 2391 aaPredicted RBP1.33□□□□□ -2.2
CCDC39-206ENST00000489868 ERICH4A6NGS2 130 aa1.33□□□□□ -2.2
CCDC39-206ENST00000489868 HMMRO75330 724 aa1.33□□□□□ -2.2
CCDC39-206ENST00000489868 PDCD6O75340 191 aa1.33□□□□□ -2.2
CCDC39-206ENST00000489868 ZNF7P17097 686 aaPredicted RBP1.33□□□□□ -2.2
CCDC39-206ENST00000489868 RAB38P57729 211 aa1.33□□□□□ -2.2
CCDC39-206ENST00000489868 STX4Q12846 297 aa1.33□□□□□ -2.2
CCDC39-206ENST00000489868 C10orf107Q8IVU9 208 aa1.33□□□□□ -2.2
CCDC39-206ENST00000489868 GPR119Q8TDV5 335 aa1.33□□□□□ -2.2
CCDC39-206ENST00000489868 DIABLOQ9NR28 239 aa1.33□□□□□ -2.2
CCDC39-206ENST00000489868 VAPAQ9P0L0 249 aa1.33□□□□□ -2.2
CCDC39-206ENST00000489868 TBL2Q9Y4P3 447 aaKnown RBP1.33□□□□□ -2.2
CCDC39-206ENST00000489868 CR1P17927 2039 aa1.32□□□□□ -2.2
CCDC39-206ENST00000489868 A0A0J9YX75 114 aa1.32□□□□□ -2.2
CCDC39-206ENST00000489868 TMEM250H0YL14 139 aa1.32□□□□□ -2.2
CCDC39-206ENST00000489868 SPOPO43791 374 aa1.32□□□□□ -2.2
CCDC39-206ENST00000489868 TPM2P07951 284 aa1.32□□□□□ -2.2
CCDC39-206ENST00000489868 ARL14EPLP0DKL9 152 aa1.32□□□□□ -2.2
CCDC39-206ENST00000489868 ZNF3P17036 446 aa1.32□□□□□ -2.2
CCDC39-206ENST00000489868 HES3Q5TGS1 186 aa1.32□□□□□ -2.2
CCDC39-206ENST00000489868 SLC25A45Q8N413 288 aa1.32□□□□□ -2.2
CCDC39-206ENST00000489868 OR6N2Q8NGY6 317 aa1.32□□□□□ -2.2
CCDC39-206ENST00000489868 CD200R1Q8TD46 325 aa1.32□□□□□ -2.2
CCDC39-206ENST00000489868 NELFBQ8WX92 580 aa1.32□□□□□ -2.2
CCDC39-206ENST00000489868 SUCNR1Q9BXA5 334 aa1.32□□□□□ -2.2
CCDC39-206ENST00000489868 GAL3ST2Q9H3Q3 398 aa1.32□□□□□ -2.2
CCDC39-206ENST00000489868 TDRD3Q9H7E2 651 aaKnown RBP1.32□□□□□ -2.2
CCDC39-206ENST00000489868 MINOS1-NBL1R4GNA1 71 aa1.32□□□□□ -2.2
CCDC39-206ENST00000489868 KIF27Q86VH2 1401 aa1.32□□□□□ -2.2
CCDC39-206ENST00000489868 IGHV3OR15-7A0A075B7D8 119 aa1.31□□□□□ -2.2
CCDC39-206ENST00000489868 ARGFXA6NJG6 315 aa1.31□□□□□ -2.2
CCDC39-206ENST00000489868 FNDC10F2Z333 226 aa1.31□□□□□ -2.2
CCDC39-206ENST00000489868 SC5DO75845 299 aa1.31□□□□□ -2.2
CCDC39-206ENST00000489868 SLC2A1P11166 492 aa1.31□□□□□ -2.2
CCDC39-206ENST00000489868 CPMP14384 443 aa1.31□□□□□ -2.2
CCDC39-206ENST00000489868 TTPAP49638 278 aa1.31□□□□□ -2.2
CCDC39-206ENST00000489868 KRTAP10-4P60372 401 aaPredicted RBP1.31□□□□□ -2.2
CCDC39-206ENST00000489868 WDR43Q15061 677 aaKnown RBP eCLIP1.31□□□□□ -2.2
CCDC39-206ENST00000489868 FAHD1Q6P587 224 aa1.31□□□□□ -2.2
CCDC39-206ENST00000489868 SPICQ8N5J4 248 aa1.31□□□□□ -2.2
CCDC39-206ENST00000489868 CAPZA3Q96KX2 299 aa1.31□□□□□ -2.2
CCDC39-206ENST00000489868 SYT4Q9H2B2 425 aa1.31□□□□□ -2.2
CCDC39-206ENST00000489868 NCOR1P1Q9H4R4 102 aa1.31□□□□□ -2.2
CCDC39-206ENST00000489868 STMN3Q9NZ72 180 aa1.31□□□□□ -2.2
CCDC39-206ENST00000489868 HEY1Q9Y5J3 304 aa1.31□□□□□ -2.2
CCDC39-206ENST00000489868 A0A0G2JQZ4 141 aa1.3□□□□□ -2.2
CCDC39-206ENST00000489868 J3QLI3 93 aa1.3□□□□□ -2.2
CCDC39-206ENST00000489868 CRYGCP07315 174 aa1.3□□□□□ -2.2
CCDC39-206ENST00000489868 BAXQ07812 192 aa1.3□□□□□ -2.2
CCDC39-206ENST00000489868 HTR4Q13639 388 aa1.3□□□□□ -2.2
CCDC39-206ENST00000489868 MUC15Q8N387 334 aa1.3□□□□□ -2.2
CCDC39-206ENST00000489868 C2orf73Q8N5S3 287 aaPredicted RBP1.3□□□□□ -2.2
CCDC39-206ENST00000489868 OR2AE1Q8NHA4 323 aa1.3□□□□□ -2.2
CCDC39-206ENST00000489868 MTCH2Q9Y6C9 303 aa1.3□□□□□ -2.2
CCDC39-206ENST00000489868 MUC21A0A0G2JKD1 596 aa1.29□□□□□ -2.2
CCDC39-206ENST00000489868 MUC21A0A140T8X8 626 aa1.29□□□□□ -2.2
CCDC39-206ENST00000489868 A0A1W2PRG6 482 aa1.29□□□□□ -2.2
CCDC39-206ENST00000489868 TRAPPC3O43617 180 aa1.29□□□□□ -2.2
CCDC39-206ENST00000489868 TSPOP30536 169 aa1.29□□□□□ -2.2
CCDC39-206ENST00000489868 RHOAP61586 193 aa1.29□□□□□ -2.2
CCDC39-206ENST00000489868 HBG1P69891 147 aa1.29□□□□□ -2.2
CCDC39-206ENST00000489868 HBG2P69892 147 aa1.29□□□□□ -2.2
CCDC39-206ENST00000489868 TSPAN31Q12999 210 aa1.29□□□□□ -2.2
CCDC39-206ENST00000489868 C6orf183Q5T699 404 aa1.29□□□□□ -2.2
CCDC39-206ENST00000489868 SYS1Q8N2H4 156 aa1.29□□□□□ -2.2
CCDC39-206ENST00000489868 TCAIMQ8N3R3 496 aa1.29□□□□□ -2.2
CCDC39-206ENST00000489868 ZFAND2AQ8N6M9 145 aa1.29□□□□□ -2.2
CCDC39-206ENST00000489868 ZNF321PQ8N8H1 164 aa1.29□□□□□ -2.2
CCDC39-206ENST00000489868 CASTOR1Q8WTX7 329 aa1.29□□□□□ -2.2
CCDC39-206ENST00000489868 PDCD6IPQ8WUM4 868 aaKnown RBP1.29□□□□□ -2.2
CCDC39-206ENST00000489868 CLDN23Q96B33 292 aa1.29□□□□□ -2.2
CCDC39-206ENST00000489868 OR52B2Q96RD2 323 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms