RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 CALYQ9NYX4 217 aa17.05■□□□□ 0.32
LIME1-207ENST00000489212 TPRKBQ9Y3C4 175 aa17.05■□□□□ 0.32
LIME1-207ENST00000489212 A0A087X0M5 115 aa17.04■□□□□ 0.32
LIME1-207ENST00000489212 A0A1B0GX30 115 aa17.04■□□□□ 0.32
LIME1-207ENST00000489212 GTF2F2P13984 249 aa17.04■□□□□ 0.32
LIME1-207ENST00000489212 MAPK3P27361 379 aaPredicted RBP17.04■□□□□ 0.32
LIME1-207ENST00000489212 HTR1DP28221 377 aa17.04■□□□□ 0.32
LIME1-207ENST00000489212 GABRA5P31644 462 aa17.04■□□□□ 0.32
LIME1-207ENST00000489212 DYNLT3P51808 116 aa17.04■□□□□ 0.32
LIME1-207ENST00000489212 MED22Q15528 200 aa17.04■□□□□ 0.32
LIME1-207ENST00000489212 MPV17LQ2QL34 196 aa17.04■□□□□ 0.32
LIME1-207ENST00000489212 LIAT1Q6ZQX7 453 aa17.04■□□□□ 0.32
LIME1-207ENST00000489212 LINC00596Q86U02 117 aa17.04■□□□□ 0.32
LIME1-207ENST00000489212 TMEM219Q86XT9 240 aa17.04■□□□□ 0.32
LIME1-207ENST00000489212 CDH26Q8IXH8 852 aa17.04■□□□□ 0.32
LIME1-207ENST00000489212 MRGPRDQ8TDS7 321 aa17.04■□□□□ 0.32
LIME1-207ENST00000489212 LINC00574Q9H8X3 128 aa17.04■□□□□ 0.32
LIME1-207ENST00000489212 RAB18Q9NP72 206 aa17.04■□□□□ 0.32
LIME1-207ENST00000489212 ABCB10Q9NRK6 738 aa17.04■□□□□ 0.32
LIME1-207ENST00000489212 FBLN5Q9UBX5 448 aa17.04■□□□□ 0.32
LIME1-207ENST00000489212 CRHBPP24387 322 aa17.03■□□□□ 0.32
LIME1-207ENST00000489212 KIR2DS4P43632 304 aa17.03■□□□□ 0.32
LIME1-207ENST00000489212 GPR176Q14439 515 aa17.03■□□□□ 0.32
LIME1-207ENST00000489212 ATAD3CQ5T2N8 411 aa17.03■□□□□ 0.32
LIME1-207ENST00000489212 AWAT2Q6E213 333 aa17.03■□□□□ 0.32
LIME1-207ENST00000489212 MS4A15Q8N5U1 240 aa17.03■□□□□ 0.32
LIME1-207ENST00000489212 ZNF565Q8N9K5 539 aa17.03■□□□□ 0.32
LIME1-207ENST00000489212 ZNF596Q8TC21 504 aa17.03■□□□□ 0.32
LIME1-207ENST00000489212 THRSPQ92748 146 aa17.03■□□□□ 0.32
LIME1-207ENST00000489212 PCDHB16Q9NRJ7 776 aa17.03■□□□□ 0.32
LIME1-207ENST00000489212 DPM3Q9P2X0 92 aa17.03■□□□□ 0.32
LIME1-207ENST00000489212 NPIPB11E5RHQ5 1161 aa17.02■□□□□ 0.32
LIME1-207ENST00000489212 RGS10O43665 173 aa17.02■□□□□ 0.32
LIME1-207ENST00000489212 SC5DO75845 299 aa17.02■□□□□ 0.32
LIME1-207ENST00000489212 IL1AP01583 271 aa17.02■□□□□ 0.32
LIME1-207ENST00000489212 NFYBP25208 207 aa17.02■□□□□ 0.32
LIME1-207ENST00000489212 HLA-DRB5Q30154 266 aa17.02■□□□□ 0.32
LIME1-207ENST00000489212 LIPKQ5VXJ0 399 aa17.02■□□□□ 0.32
LIME1-207ENST00000489212 LRRTM1Q86UE6 522 aa17.02■□□□□ 0.32
LIME1-207ENST00000489212 NKAIN3Q8N8D7 197 aa17.02■□□□□ 0.32
LIME1-207ENST00000489212 TMEM104Q8NE00 496 aa17.02■□□□□ 0.32
LIME1-207ENST00000489212 OR4C13Q8NGP0 309 aa17.02■□□□□ 0.32
LIME1-207ENST00000489212 RFESDQ8TAC1 157 aa17.02■□□□□ 0.32
LIME1-207ENST00000489212 CYYR1Q96J86 154 aa17.02■□□□□ 0.32
LIME1-207ENST00000489212 BANF2Q9H503 90 aa17.02■□□□□ 0.32
LIME1-207ENST00000489212 RANBP3Q9H6Z4 567 aaPredicted RBP17.02■□□□□ 0.32
LIME1-207ENST00000489212 IDI2-AS1Q9NZ38 188 aa17.02■□□□□ 0.32
LIME1-207ENST00000489212 FAM90A22PA8MWA6 464 aa17.01■□□□□ 0.31
LIME1-207ENST00000489212 F2RL2O00254 374 aa17.01■□□□□ 0.31
LIME1-207ENST00000489212 ATP6V1G2O95670 118 aa17.01■□□□□ 0.31
LIME1-207ENST00000489212 SSTR5P35346 364 aa17.01■□□□□ 0.31
LIME1-207ENST00000489212 HSPA13P48723 471 aa17.01■□□□□ 0.31
LIME1-207ENST00000489212 EFNB2P52799 333 aa17.01■□□□□ 0.31
LIME1-207ENST00000489212 GPR50Q13585 617 aa17.01■□□□□ 0.31
LIME1-207ENST00000489212 UFD1Q92890 307 aa17.01■□□□□ 0.31
LIME1-207ENST00000489212 LEAP2Q969E1 77 aa17.01■□□□□ 0.31
LIME1-207ENST00000489212 CNBD2Q96M20 576 aa17.01■□□□□ 0.31
LIME1-207ENST00000489212 UQCC2Q9BRT2 126 aa17.01■□□□□ 0.31
LIME1-207ENST00000489212 NPFFR1Q9GZQ6 430 aa17.01■□□□□ 0.31
LIME1-207ENST00000489212 RCC2Q9P258 522 aaKnown RBP17.01■□□□□ 0.31
LIME1-207ENST00000489212 TMEM30CPA0ZSE6 113 aa17■□□□□ 0.31
LIME1-207ENST00000489212 LY6LH3BQJ8 138 aa17■□□□□ 0.31
LIME1-207ENST00000489212 BUB1B-PAK6H3BSN5 160 aa17■□□□□ 0.31
LIME1-207ENST00000489212 TOR1AO14656 332 aa17■□□□□ 0.31
LIME1-207ENST00000489212 IGHV3-7P01780 117 aa17■□□□□ 0.31
LIME1-207ENST00000489212 VHLP40337 213 aa17■□□□□ 0.31
LIME1-207ENST00000489212 MAP2K4P45985 399 aa17■□□□□ 0.31
LIME1-207ENST00000489212 LTC4SQ16873 150 aa17■□□□□ 0.31
LIME1-207ENST00000489212 FBLN7Q53RD9 439 aa17■□□□□ 0.31
LIME1-207ENST00000489212 CEACAM19Q7Z692 300 aa17■□□□□ 0.31
LIME1-207ENST00000489212 MRPS24Q96EL2 167 aaKnown RBP17■□□□□ 0.31
LIME1-207ENST00000489212 CCDC90BQ9GZT6 254 aa17■□□□□ 0.31
LIME1-207ENST00000489212 ZNF702PQ9H963 129 aa17■□□□□ 0.31
LIME1-207ENST00000489212 TCF7L1Q9HCS4 588 aa17■□□□□ 0.31
LIME1-207ENST00000489212 LEUTXA8MZ59 168 aa16.99■□□□□ 0.31
LIME1-207ENST00000489212 HSMCR30P0CW71 290 aa16.99■□□□□ 0.31
LIME1-207ENST00000489212 MGMTP16455 207 aa16.99■□□□□ 0.31
LIME1-207ENST00000489212 CD24P25063 80 aa16.99■□□□□ 0.31
LIME1-207ENST00000489212 PRRX1P54821 245 aa16.99■□□□□ 0.31
LIME1-207ENST00000489212 TPBGQ13641 420 aa16.99■□□□□ 0.31
LIME1-207ENST00000489212 RBM39Q14498 530 aaKnown RBP16.99■□□□□ 0.31
LIME1-207ENST00000489212 RBM48Q5RL73 367 aaKnown RBP16.99■□□□□ 0.31
LIME1-207ENST00000489212 TPTE2P1Q5T6R2 138 aa16.99■□□□□ 0.31
LIME1-207ENST00000489212 TREML4Q6UXN2 200 aa16.99■□□□□ 0.31
LIME1-207ENST00000489212 ZNF497Q6ZNH5 498 aa16.99■□□□□ 0.31
LIME1-207ENST00000489212 PRSS48Q7RTY5 328 aa16.99■□□□□ 0.31
LIME1-207ENST00000489212 OR9G1Q8NH87 305 aa16.99■□□□□ 0.31
LIME1-207ENST00000489212 CCDC107Q8WV48 283 aa16.99■□□□□ 0.31
LIME1-207ENST00000489212 PHYHIPQ92561 330 aa16.99■□□□□ 0.31
LIME1-207ENST00000489212 TMEM203Q969S6 136 aa16.99■□□□□ 0.31
LIME1-207ENST00000489212 Q96M66 194 aa16.99■□□□□ 0.31
LIME1-207ENST00000489212 SELENOIQ9C0D9 397 aa16.99■□□□□ 0.31
LIME1-207ENST00000489212 PITPNC1Q9UKF7 332 aa16.99■□□□□ 0.31
LIME1-207ENST00000489212 MEGF8Q7Z7M0 2845 aa16.99■□□□□ 0.31
LIME1-207ENST00000489212 C15orf65H3BRN8 121 aa16.98■□□□□ 0.31
LIME1-207ENST00000489212 CRTAPO75718 401 aaPredicted RBP16.98■□□□□ 0.31
LIME1-207ENST00000489212 MT-ND4P03905 459 aa16.98■□□□□ 0.31
LIME1-207ENST00000489212 UCHL1P09936 223 aa16.98■□□□□ 0.31
LIME1-207ENST00000489212 RPS25P62851 125 aaKnown RBP16.98■□□□□ 0.31
LIME1-207ENST00000489212 HABP2Q14520 560 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms