RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 SOX6P35712 828 aa12.51□□□□□ -0.41
USP48-210ENST00000489108 ZP1P60852 638 aa12.51□□□□□ -0.41
USP48-210ENST00000489108 CDK5R1Q15078 307 aa12.51□□□□□ -0.41
USP48-210ENST00000489108 SLC16A12Q6ZSM3 486 aa12.51□□□□□ -0.41
USP48-210ENST00000489108 DHFR2Q86XF0 187 aa12.51□□□□□ -0.41
USP48-210ENST00000489108 PRSS35Q8N3Z0 413 aa12.51□□□□□ -0.41
USP48-210ENST00000489108 OR5D18Q8NGL1 313 aa12.51□□□□□ -0.41
USP48-210ENST00000489108 MRGPRDQ8TDS7 321 aa12.51□□□□□ -0.41
USP48-210ENST00000489108 SPACA5Q96QH8 159 aa12.51□□□□□ -0.41
USP48-210ENST00000489108 ARL8BQ9NVJ2 186 aa12.51□□□□□ -0.41
USP48-210ENST00000489108 WSB1Q9Y6I7 421 aa12.51□□□□□ -0.41
USP48-210ENST00000489108 TRAV39A0A0B4J263 110 aa12.5□□□□□ -0.41
USP48-210ENST00000489108 LOC107986453A0A1B0GWG9 222 aa12.5□□□□□ -0.41
USP48-210ENST00000489108 GNGT2O14610 69 aa12.5□□□□□ -0.41
USP48-210ENST00000489108 MOSP00540 346 aa12.5□□□□□ -0.41
USP48-210ENST00000489108 OR5H8P0DN80 308 aa12.5□□□□□ -0.41
USP48-210ENST00000489108 RAP2AP10114 183 aa12.5□□□□□ -0.41
USP48-210ENST00000489108 CD1BP29016 333 aa12.5□□□□□ -0.41
USP48-210ENST00000489108 PPIFP30405 207 aaKnown RBP12.5□□□□□ -0.41
USP48-210ENST00000489108 SLURP1P55000 103 aa12.5□□□□□ -0.41
USP48-210ENST00000489108 ISL1P61371 349 aa12.5□□□□□ -0.41
USP48-210ENST00000489108 MS4A2Q01362 244 aa12.5□□□□□ -0.41
USP48-210ENST00000489108 ACSM6Q6P461 480 aa12.5□□□□□ -0.41
USP48-210ENST00000489108 TMEM104Q8NE00 496 aa12.5□□□□□ -0.41
USP48-210ENST00000489108 ST6GALNAC6Q969X2 333 aa12.5□□□□□ -0.41
USP48-210ENST00000489108 FGGYQ96C11 551 aa12.5□□□□□ -0.41
USP48-210ENST00000489108 OPALINQ96PE5 141 aa12.5□□□□□ -0.41
USP48-210ENST00000489108 ALX4Q9H161 411 aaPredicted RBP12.5□□□□□ -0.41
USP48-210ENST00000489108 GHITMQ9H3K2 345 aa12.5□□□□□ -0.41
USP48-210ENST00000489108 NCOR1P1Q9H4R4 102 aa12.5□□□□□ -0.41
USP48-210ENST00000489108 H2AFY2Q9P0M6 372 aaPredicted RBP12.5□□□□□ -0.41
USP48-210ENST00000489108 TAGLN3Q9UI15 199 aa12.5□□□□□ -0.41
USP48-210ENST00000489108 METTL15A6NJ78 407 aa12.49□□□□□ -0.41
USP48-210ENST00000489108 A8MZ25 164 aa12.49□□□□□ -0.41
USP48-210ENST00000489108 G3V318 75 aa12.49□□□□□ -0.41
USP48-210ENST00000489108 H0YJX3 145 aa12.49□□□□□ -0.41
USP48-210ENST00000489108 M0R129 80 aa12.49□□□□□ -0.41
USP48-210ENST00000489108 SSTR5P35346 364 aa12.49□□□□□ -0.41
USP48-210ENST00000489108 CRISP1P54107 249 aa12.49□□□□□ -0.41
USP48-210ENST00000489108 UTS2BQ765I0 119 aa12.49□□□□□ -0.41
USP48-210ENST00000489108 SPATA25Q9BR10 227 aa12.49□□□□□ -0.41
USP48-210ENST00000489108 BARHL1Q9BZE3 327 aa12.49□□□□□ -0.41
USP48-210ENST00000489108 NEK6Q9HC98 313 aa12.49□□□□□ -0.41
USP48-210ENST00000489108 ZNF580Q9UK33 172 aa12.49□□□□□ -0.41
USP48-210ENST00000489108 TNCP24821 2201 aa12.48□□□□□ -0.41
USP48-210ENST00000489108 TRAV24A0A0B4J272 114 aa12.48□□□□□ -0.41
USP48-210ENST00000489108 IGLV1-40P01703 118 aa12.48□□□□□ -0.41
USP48-210ENST00000489108 ANXA8P13928 327 aa12.48□□□□□ -0.41
USP48-210ENST00000489108 KIR3DL2P43630 455 aa12.48□□□□□ -0.41
USP48-210ENST00000489108 RAB9AP51151 201 aa12.48□□□□□ -0.41
USP48-210ENST00000489108 PAN3Q58A45 887 aaKnown RBP12.48□□□□□ -0.41
USP48-210ENST00000489108 AADACL4Q5VUY2 407 aa12.48□□□□□ -0.41
USP48-210ENST00000489108 OR10A7Q8NGE5 316 aa12.48□□□□□ -0.41
USP48-210ENST00000489108 OR8H1Q8NGG4 311 aa12.48□□□□□ -0.41
USP48-210ENST00000489108 RTN4IP1Q8WWV3 396 aaPredicted RBP12.48□□□□□ -0.41
USP48-210ENST00000489108 ARPC1AQ92747 370 aa12.48□□□□□ -0.41
USP48-210ENST00000489108 SPSB1Q96BD6 273 aa12.48□□□□□ -0.41
USP48-210ENST00000489108 NR1H4Q96RI1 486 aaPredicted RBP12.48□□□□□ -0.41
USP48-210ENST00000489108 CHCHD6Q9BRQ6 235 aa12.48□□□□□ -0.41
USP48-210ENST00000489108 OR51J1Q9H342 316 aa12.48□□□□□ -0.41
USP48-210ENST00000489108 RHOFQ9HBH0 211 aa12.48□□□□□ -0.41
USP48-210ENST00000489108 NDE1Q9NXR1 346 aa12.48□□□□□ -0.41
USP48-210ENST00000489108 ZNF107Q9UII5 783 aaPredicted RBP12.48□□□□□ -0.41
USP48-210ENST00000489108 ALMS1Q8TCU4 4167 aa12.47□□□□□ -0.41
USP48-210ENST00000489108 A0A1W2PQL4 384 aaPredicted RBP12.47□□□□□ -0.41
USP48-210ENST00000489108 LINC01619G3V211 115 aa12.47□□□□□ -0.41
USP48-210ENST00000489108 OCM2P0CE71 109 aa12.47□□□□□ -0.41
USP48-210ENST00000489108 OCMP0CE72 109 aaPredicted RBP12.47□□□□□ -0.41
USP48-210ENST00000489108 SLC2A2P11168 524 aaPredicted RBP12.47□□□□□ -0.41
USP48-210ENST00000489108 TRIM25Q14258 630 aaKnown RBP12.47□□□□□ -0.41
USP48-210ENST00000489108 PTGES3Q15185 160 aaKnown RBP12.47□□□□□ -0.41
USP48-210ENST00000489108 HAGHQ16775 308 aa12.47□□□□□ -0.41
USP48-210ENST00000489108 RSBN1Q5VWQ0 802 aaPredicted RBP12.47□□□□□ -0.41
USP48-210ENST00000489108 NXNL2Q5VZ03 156 aa12.47□□□□□ -0.41
USP48-210ENST00000489108 HAPLN4Q86UW8 402 aa12.47□□□□□ -0.41
USP48-210ENST00000489108 SAXO1Q8IYX7 474 aa12.47□□□□□ -0.41
USP48-210ENST00000489108 TCEANCQ8N8B7 351 aa12.47□□□□□ -0.41
USP48-210ENST00000489108 PLPPR1Q8TBJ4 325 aa12.47□□□□□ -0.41
USP48-210ENST00000489108 FAM90A10PA6NDY2 464 aa12.46□□□□□ -0.41
USP48-210ENST00000489108 IFNA6P05013 189 aa12.46□□□□□ -0.41
USP48-210ENST00000489108 UBCP0CG48 685 aaKnown RBP12.46□□□□□ -0.41
USP48-210ENST00000489108 ZNF20P17024 532 aa12.46□□□□□ -0.41
USP48-210ENST00000489108 EFNB1P98172 346 aa12.46□□□□□ -0.41
USP48-210ENST00000489108 LYPD6Q86Y78 171 aa12.46□□□□□ -0.41
USP48-210ENST00000489108 SGPP2Q8IWX5 399 aa12.46□□□□□ -0.41
USP48-210ENST00000489108 RNF166Q96A37 237 aaPredicted RBP12.46□□□□□ -0.41
USP48-210ENST00000489108 OR4C12Q96R67 309 aa12.46□□□□□ -0.41
USP48-210ENST00000489108 ZCCHC4Q9H5U6 513 aa12.46□□□□□ -0.41
USP48-210ENST00000489108 TPSG1Q9NRR2 321 aa12.46□□□□□ -0.41
USP48-210ENST00000489108 CHCHD3Q9NX63 227 aaKnown RBP12.46□□□□□ -0.41
USP48-210ENST00000489108 HERC2O95714 4834 aa12.45□□□□□ -0.42
USP48-210ENST00000489108 FRAS1Q86XX4 4008 aa12.45□□□□□ -0.42
USP48-210ENST00000489108 IGHV4OR15-8A0A075B7B6 117 aa12.45□□□□□ -0.42
USP48-210ENST00000489108 A0A087WW49 117 aa12.45□□□□□ -0.42
USP48-210ENST00000489108 RBMY1BA6NDE4 496 aaKnown RBP12.45□□□□□ -0.42
USP48-210ENST00000489108 RBMY1EA6NEQ0 496 aaKnown RBP12.45□□□□□ -0.42
USP48-210ENST00000489108 SULT1C4O75897 302 aa12.45□□□□□ -0.42
USP48-210ENST00000489108 APOL3O95236 402 aa12.45□□□□□ -0.42
USP48-210ENST00000489108 OR8U9P0C7N5 309 aa12.45□□□□□ -0.42
USP48-210ENST00000489108 RBMY1DP0C7P1 496 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms