RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 SPOPO43791 374 aa1.15□□□□□ -2.23
PTPN4-212ENST00000488896 PDCD6O75340 191 aa1.15□□□□□ -2.23
PTPN4-212ENST00000488896 PSMB9P28065 219 aa1.15□□□□□ -2.23
PTPN4-212ENST00000488896 NUP62P37198 522 aaPredicted RBP1.15□□□□□ -2.23
PTPN4-212ENST00000488896 RANBP1P43487 201 aa1.15□□□□□ -2.23
PTPN4-212ENST00000488896 GOLGA7BQ2TAP0 167 aa1.15□□□□□ -2.23
PTPN4-212ENST00000488896 ZCWPW2Q504Y3 356 aa1.15□□□□□ -2.23
PTPN4-212ENST00000488896 NIPAL1Q6NVV3 410 aa1.15□□□□□ -2.23
PTPN4-212ENST00000488896 PDCL2Q8N4E4 241 aa1.15□□□□□ -2.23
PTPN4-212ENST00000488896 SPICQ8N5J4 248 aa1.15□□□□□ -2.23
PTPN4-212ENST00000488896 FER1L6-AS1Q8NA97 138 aa1.15□□□□□ -2.23
PTPN4-212ENST00000488896 OR8G5Q8NG78 346 aa1.15□□□□□ -2.23
PTPN4-212ENST00000488896 LGALS14Q8TCE9 139 aa1.15□□□□□ -2.23
PTPN4-212ENST00000488896 KCTD4Q8WVF5 259 aa1.15□□□□□ -2.23
PTPN4-212ENST00000488896 DIABLOQ9NR28 239 aa1.15□□□□□ -2.23
PTPN4-212ENST00000488896 RPUSD1Q9UJJ7 312 aaKnown RBP1.15□□□□□ -2.23
PTPN4-212ENST00000488896 BZW2Q9Y6E2 419 aaKnown RBP1.15□□□□□ -2.23
PTPN4-212ENST00000488896 HSPE1-MOB4S4R3N1 261 aa1.15□□□□□ -2.23
PTPN4-212ENST00000488896 ADAMTS7Q9UKP4 1686 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 C19orf71A6NCJ1 209 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 MGAT4DA6NG13 374 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 E7EWF7 191 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 EEF1E1O43324 174 aaKnown RBP1.14□□□□□ -2.23
PTPN4-212ENST00000488896 GUSBP08236 651 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 PSKH1P11801 424 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 TSPOP30536 169 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 MAGEA6P43360 314 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 DSTNP60981 165 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 XIAPP98170 497 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 BAXQ07812 192 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 CEACAM21Q3KPI0 293 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 FAM19A3Q7Z5A8 133 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 KRTCAP2Q8N6L1 136 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 GPR119Q8TDV5 335 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 HIST1H2BAQ96A08 127 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 ZMYND19Q96E35 227 aaPredicted RBP1.14□□□□□ -2.23
PTPN4-212ENST00000488896 CIB1Q99828 191 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 APOL4Q9BPW4 351 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 SUCNR1Q9BXA5 334 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 MFSD1Q9H3U5 465 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 POMPQ9Y244 141 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 TBL2Q9Y4P3 447 aaKnown RBP1.14□□□□□ -2.23
PTPN4-212ENST00000488896 PHLDA3Q9Y5J5 127 aa1.14□□□□□ -2.23
PTPN4-212ENST00000488896 STRCP1A6NGW2 1772 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 CEP170Q5SW79 1584 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 KLRC4-KLRK1H3BQV0 150 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 hCG_2039718K7EN88 272 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 SHOX2O60902 331 aaPredicted RBP1.13□□□□□ -2.23
PTPN4-212ENST00000488896 SOX14O95416 240 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 GYPCP04921 128 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 GIMD1P0DJR0 217 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 SLC2A1P11166 492 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 ZNF3P17036 446 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 CARD18P57730 90 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 HBG1P69891 147 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 HBG2P69892 147 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 PRDX1Q06830 199 aaKnown RBP1.13□□□□□ -2.23
PTPN4-212ENST00000488896 MMDQ15546 238 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 Q6ZT83 130 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 CLEC20AQ6ZU45 233 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 SLC25A45Q8N413 288 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 OR4K17Q8NGC6 315 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 LRRC39Q96DD0 335 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 ZNF625Q96I27 306 aaPredicted RBP1.13□□□□□ -2.23
PTPN4-212ENST00000488896 HINT2Q9BX68 163 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 AICDAQ9GZX7 198 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 ALX4Q9H161 411 aaPredicted RBP1.13□□□□□ -2.23
PTPN4-212ENST00000488896 FBXL15Q9H469 300 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 KCNIP2Q9NS61 270 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 CLEC2DQ9UHP7 191 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 VPREB3Q9UKI3 123 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 CCL26Q9Y258 94 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 RBMX2Q9Y388 322 aaKnown RBP1.13□□□□□ -2.23
PTPN4-212ENST00000488896 ADGRB3O60242 1522 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 LAMB2P55268 1798 aa1.13□□□□□ -2.23
PTPN4-212ENST00000488896 FLG2Q5D862 2391 aaPredicted RBP1.13□□□□□ -2.23
PTPN4-212ENST00000488896 ATAD5Q96QE3 1844 aa1.12□□□□□ -2.23
PTPN4-212ENST00000488896 TNIKQ9UKE5 1360 aa1.12□□□□□ -2.23
PTPN4-212ENST00000488896 ARAP3Q8WWN8 1544 aa1.12□□□□□ -2.23
PTPN4-212ENST00000488896 ARGFXA6NJG6 315 aa1.12□□□□□ -2.23
PTPN4-212ENST00000488896 F5H5T6 163 aa1.12□□□□□ -2.23
PTPN4-212ENST00000488896 TMEM250H0YL14 139 aa1.12□□□□□ -2.23
PTPN4-212ENST00000488896 LY6LH3BQJ8 138 aa1.12□□□□□ -2.23
PTPN4-212ENST00000488896 TP53I11O14683 189 aa1.12□□□□□ -2.23
PTPN4-212ENST00000488896 CDIPTO14735 213 aa1.12□□□□□ -2.23
PTPN4-212ENST00000488896 DNASE1L1P49184 302 aa1.12□□□□□ -2.23
PTPN4-212ENST00000488896 APOFQ13790 326 aa1.12□□□□□ -2.23
PTPN4-212ENST00000488896 TMEM176BQ3YBM2 270 aaPredicted RBP1.12□□□□□ -2.23
PTPN4-212ENST00000488896 HBMQ6B0K9 141 aa1.12□□□□□ -2.23
PTPN4-212ENST00000488896 KRTAP5-10Q6L8G5 202 aa1.12□□□□□ -2.23
PTPN4-212ENST00000488896 DGAT2L6Q6ZPD8 337 aa1.12□□□□□ -2.23
PTPN4-212ENST00000488896 NIT1Q86X76 327 aa1.12□□□□□ -2.23
PTPN4-212ENST00000488896 OR10P1Q8NGE3 313 aa1.12□□□□□ -2.23
PTPN4-212ENST00000488896 CASTOR1Q8WTX7 329 aa1.12□□□□□ -2.23
PTPN4-212ENST00000488896 OR5P2Q8WZ92 322 aa1.12□□□□□ -2.23
PTPN4-212ENST00000488896 PITX2Q99697 317 aa1.12□□□□□ -2.23
PTPN4-212ENST00000488896 ARHGAP32A7KAX9 2087 aa1.12□□□□□ -2.23
PTPN4-212ENST00000488896 IGKV1-12A0A0C4DH73 117 aa1.11□□□□□ -2.23
PTPN4-212ENST00000488896 FAM183AA6NL82 134 aa1.11□□□□□ -2.23
PTPN4-212ENST00000488896 SLC25A20O43772 301 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms