RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 VAMP2P63027 116 aa12.28□□□□□ -0.44
RER1-207ENST00000488353 CPEB2Q7Z5Q1 589 aaKnown RBP12.28□□□□□ -0.44
RER1-207ENST00000488353 CCDC71LQ8N9Z2 235 aa12.28□□□□□ -0.44
RER1-207ENST00000488353 MRGPRX4Q96LA9 322 aa12.28□□□□□ -0.44
RER1-207ENST00000488353 LRFN1Q9P244 771 aa12.28□□□□□ -0.44
RER1-207ENST00000488353 V9GYS6 101 aa12.28□□□□□ -0.44
RER1-207ENST00000488353 LAMTOR5O43504 91 aa12.28□□□□□ -0.44
RER1-207ENST00000488353 PDLIM4P50479 330 aa12.28□□□□□ -0.44
RER1-207ENST00000488353 DYNLT3P51808 116 aa12.28□□□□□ -0.44
RER1-207ENST00000488353 TDGF1P3P51864 188 aa12.28□□□□□ -0.44
RER1-207ENST00000488353 ZFP36L1Q07352 338 aaKnown RBP12.28□□□□□ -0.44
RER1-207ENST00000488353 LPAL2Q16609 132 aa12.28□□□□□ -0.44
RER1-207ENST00000488353 PRAMEF20Q5VT98 475 aa12.28□□□□□ -0.44
RER1-207ENST00000488353 SLC25A47Q6Q0C1 308 aa12.28□□□□□ -0.44
RER1-207ENST00000488353 WDR5BQ86VZ2 330 aa12.28□□□□□ -0.44
RER1-207ENST00000488353 H1FOOQ8IZA3 346 aaPredicted RBP12.28□□□□□ -0.44
RER1-207ENST00000488353 TMEM123Q8N131 208 aa12.28□□□□□ -0.44
RER1-207ENST00000488353 TMEM18Q96B42 140 aa12.28□□□□□ -0.44
RER1-207ENST00000488353 P4HTMQ9NXG6 502 aa12.28□□□□□ -0.44
RER1-207ENST00000488353 GOLT1BQ9Y3E0 138 aa12.28□□□□□ -0.44
RER1-207ENST00000488353 TNRC6BQ9UPQ9 1833 aaKnown RBP12.27□□□□□ -0.44
RER1-207ENST00000488353 ZNF205O95201 554 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 ONECUT2O95948 504 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 DTYMKP23919 212 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 OPRM1P35372 400 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 SRPXP78539 464 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 RUNX1Q01196 453 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 BAXQ07812 192 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 MEX3BQ6ZN04 569 aaKnown RBP12.27□□□□□ -0.45
RER1-207ENST00000488353 ZNF100Q8IYN0 542 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 MAML2Q8IZL2 1156 aaPredicted RBP12.27□□□□□ -0.45
RER1-207ENST00000488353 Q96M66 194 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 PYGO2Q9BRQ0 406 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 FAAP24Q9BTP7 215 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 PNRC2Q9NPJ4 139 aaKnown RBP12.27□□□□□ -0.45
RER1-207ENST00000488353 FAM221AA4D161 298 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 NKX2-6A6NCS4 301 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 F5H5K5 113 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 MSTNO14793 375 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 DLEU1O43261 78 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 SSSCA1O60232 199 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 BCL2P10415 239 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 EPHA1P21709 976 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 UCP3P55916 312 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 CLN3Q13286 438 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 DCAF10Q5QP82 559 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 TGIF2LYQ8IUE0 185 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 PGAM5Q96HS1 289 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 SPIN2AQ99865 258 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 SPIN2BQ9BPZ2 258 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 GLRX2Q9NS18 164 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 MYOTQ9UBF9 498 aa12.27□□□□□ -0.45
RER1-207ENST00000488353 SHANK1Q9Y566 2161 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 M0QZK8 103 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 GGCTO75223 188 aaKnown RBP12.26□□□□□ -0.45
RER1-207ENST00000488353 CST7O76096 145 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 CCKARP32238 428 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 PCP4P48539 62 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 CLDN17P56750 224 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 TAS2R30P59541 319 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 GAGE1Q13065 139 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 ZNF66Q6ZN08 573 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 TMEM217Q8N7C4 229 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 SUMF1Q8NBK3 374 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 OR11L1Q8NGX0 322 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 NAT6Q93015 286 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 ABHD14BQ96IU4 210 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 P2RX4Q99571 388 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 CBLN4Q9NTU7 201 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 GAB2Q9UQC2 676 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 ZFP92A6NM28 416 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 PFN1P07737 140 aaKnown RBP12.26□□□□□ -0.45
RER1-207ENST00000488353 OR4A8P0C604 315 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 C21orf62-AS1Q17RA5 79 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 MPV17LQ2QL34 196 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 DTX1Q86Y01 620 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 ARL6IP6Q8N6S5 226 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 OR2M3Q8NG83 312 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 PP6455Q8WZ26 134 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 LYZL4Q96KX0 146 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 TP53RKQ96S44 253 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 TMEM208Q9BTX3 173 aa12.26□□□□□ -0.45
RER1-207ENST00000488353 TECTAO75443 2155 aa12.25□□□□□ -0.45
RER1-207ENST00000488353 IGHV3-15A0A0B4J1V0 119 aa12.25□□□□□ -0.45
RER1-207ENST00000488353 TRDCB7Z8K6 153 aa12.25□□□□□ -0.45
RER1-207ENST00000488353 PPP5D1E7EU14 171 aa12.25□□□□□ -0.45
RER1-207ENST00000488353 ETV2O00321 342 aaPredicted RBP12.25□□□□□ -0.45
RER1-207ENST00000488353 SOX15O60248 233 aa12.25□□□□□ -0.45
RER1-207ENST00000488353 ZFAND5O76080 213 aa12.25□□□□□ -0.45
RER1-207ENST00000488353 FGF5P12034 268 aa12.25□□□□□ -0.45
RER1-207ENST00000488353 CCL4P13236 92 aa12.25□□□□□ -0.45
RER1-207ENST00000488353 MSX1P28360 303 aa12.25□□□□□ -0.45
RER1-207ENST00000488353 GRB2P62993 217 aaKnown RBP12.25□□□□□ -0.45
RER1-207ENST00000488353 PMS2P11Q13670 270 aa12.25□□□□□ -0.45
RER1-207ENST00000488353 TRIM61Q5EBN2 209 aa12.25□□□□□ -0.45
RER1-207ENST00000488353 MRPL41Q8IXM3 137 aaKnown RBP12.25□□□□□ -0.45
RER1-207ENST00000488353 MOB3AQ96BX8 217 aa12.25□□□□□ -0.45
RER1-207ENST00000488353 OXGR1Q96P68 337 aa12.25□□□□□ -0.45
RER1-207ENST00000488353 C3orf85A0A1B0GTC6 90 aa12.25□□□□□ -0.45
RER1-207ENST00000488353 TMEM210A6NLX4 147 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms