RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 RPS19P39019 145 aaKnown RBP9.05□□□□□ -0.96
UBE4B-210ENST00000488228 RPL5P46777 297 aaKnown RBP9.05□□□□□ -0.96
UBE4B-210ENST00000488228 KCNJ3P48549 501 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 VEGFCP49767 419 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 BLMHQ13867 455 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 MOGAT2Q3SYC2 334 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 GPR157Q5UAW9 335 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 C11orf42Q8N5U0 333 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 OR5H6Q8NGV6 325 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 UBALD1Q8TB05 177 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 MRGPRDQ8TDS7 321 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 TNFRSF14Q92956 283 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 NEDD4LQ96PU5 975 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 SLC6A7Q99884 636 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 METTL8Q9H825 291 aaKnown RBP9.05□□□□□ -0.96
UBE4B-210ENST00000488228 ETAA1Q9NY74 926 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 ZNF69Q9UC07 566 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 ATRQ13535 2644 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 CENPVL3A0A0U1RRI6 287 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 MDFIC2A0A1B0GVS7 189 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 FUOMA2VDF0 154 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 FAM172BPA6NC97 362 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 C17orf98A8MV24 154 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 MCRIP1C9JLW8 97 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 MMP23AO75900 390 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 IL1AP01583 271 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 OMGP23515 440 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 SSTR5P35346 364 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 GDNFP39905 211 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 PAX5Q02548 391 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 OLFML2AQ68BL7 652 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 HCP5Q6MZN7 132 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 BAIAP2L2Q6UXY1 529 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 ZNF497Q6ZNH5 498 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 BCL6BQ8N143 479 aaPredicted RBP9.04□□□□□ -0.96
UBE4B-210ENST00000488228 FAM89BQ8N5H3 189 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 TEX29Q8N6K0 151 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 CCDC107Q8WV48 283 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 SLC25A38Q96DW6 304 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 ARHGAP5-AS1Q96IT6 56 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 DMRTB1Q96MA1 342 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 BARHL1Q9BZE3 327 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 GAL3ST2Q9H3Q3 398 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 NUP50Q9UKX7 468 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 RAB22AQ9UL26 194 aa9.04□□□□□ -0.96
UBE4B-210ENST00000488228 UBE2J1Q9Y385 318 aaPredicted RBP9.04□□□□□ -0.96
UBE4B-210ENST00000488228 A0A075B6Q4 140 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 IGHV1-69DA0A0B4J2H0 117 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 IGHV1-69P01742 117 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 IGHV1-8P0DP01 117 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 RAB6AP20340 208 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 PRTN3P24158 256 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 CDK2P24941 298 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 RBM39Q14498 530 aaKnown RBP9.03□□□□□ -0.96
UBE4B-210ENST00000488228 SPCS2Q15005 226 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 C17orf58Q2M2W7 97 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 PLAC9Q5JTB6 97 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 UTF1Q5T230 341 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 NCR3LG1Q68D85 454 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 SLC35E4Q6ICL7 350 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 Q6ZPA2 131 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 OR56B1Q8NGI3 324 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 OR4K15Q8NH41 348 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 MRPL30Q8TCC3 161 aaKnown RBP9.03□□□□□ -0.96
UBE4B-210ENST00000488228 SLC25A46Q96AG3 418 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 HDHD3Q9BSH5 251 aaPredicted RBP9.03□□□□□ -0.96
UBE4B-210ENST00000488228 FAAP24Q9BTP7 215 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 SUCNR1Q9BXA5 334 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 ATG5Q9H1Y0 275 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 DCSTAMPQ9H295 470 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 UNKLQ9H9P5 680 aaKnown RBP9.03□□□□□ -0.96
UBE4B-210ENST00000488228 RHBDL2Q9NX52 303 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 CALYQ9NYX4 217 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 OR6C3Q9NZP0 311 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 AK3Q9UIJ7 227 aa9.03□□□□□ -0.96
UBE4B-210ENST00000488228 hCG_1809904A0A1W2PP81 198 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 A0A1W2PPE2 198 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 A0A1W2PR64 198 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 A0A1W2PRV1 198 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 ZNF729A6NN14 1252 aaPredicted RBP9.02□□□□□ -0.97
UBE4B-210ENST00000488228 RAB27BO00194 218 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 RBP4P02753 201 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 MT-ND4P03905 459 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 RANBP1P43487 201 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 TMEM50BP56557 158 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 SRSF2Q01130 221 aaKnown RBP9.02□□□□□ -0.97
UBE4B-210ENST00000488228 LTC4SQ16873 150 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 C1orf122Q6ZSJ8 110 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 USP43Q70EL4 1123 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 GAPTQ8N292 157 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 PIP4P2Q8N4L2 257 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 OR10R2Q8NGX6 335 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 RAB2BQ8WUD1 216 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 CORO2AQ92828 525 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 RAB3CQ96E17 227 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 ZNF48Q96MX3 618 aaPredicted RBP9.02□□□□□ -0.97
UBE4B-210ENST00000488228 PECRQ9BY49 303 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 MS4A7Q9GZW8 240 aaPredicted RBP9.02□□□□□ -0.97
UBE4B-210ENST00000488228 PLEKHJ1Q9NW61 149 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 TAS2R3Q9NYW6 316 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms