RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 COQ2Q96H96 371 aa12.93□□□□□ -0.34
C9orf3-219ENST00000488186 TBX15Q96SF7 602 aa12.93□□□□□ -0.34
C9orf3-219ENST00000488186 HEXA-AS1Q9H8Q6 139 aa12.93□□□□□ -0.34
C9orf3-219ENST00000488186 RCC2Q9P258 522 aaKnown RBP12.93□□□□□ -0.34
C9orf3-219ENST00000488186 TRAPPC2LQ9UL33 140 aa12.93□□□□□ -0.34
C9orf3-219ENST00000488186 CCDC160A6NGH7 325 aa12.92□□□□□ -0.34
C9orf3-219ENST00000488186 LDLRAD4O15165 306 aa12.92□□□□□ -0.34
C9orf3-219ENST00000488186 SOCS1O15524 211 aa12.92□□□□□ -0.34
C9orf3-219ENST00000488186 CA11O75493 328 aa12.92□□□□□ -0.34
C9orf3-219ENST00000488186 PRTN3P24158 256 aa12.92□□□□□ -0.34
C9orf3-219ENST00000488186 CHATP28329 748 aa12.92□□□□□ -0.34
C9orf3-219ENST00000488186 RORCP51449 518 aa12.92□□□□□ -0.34
C9orf3-219ENST00000488186 MRPS15P82914 257 aaKnown RBP12.92□□□□□ -0.34
C9orf3-219ENST00000488186 GUCA2AQ02747 115 aa12.92□□□□□ -0.34
C9orf3-219ENST00000488186 RSBN1Q5VWQ0 802 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-219ENST00000488186 SLC16A12Q6ZSM3 486 aa12.92□□□□□ -0.34
C9orf3-219ENST00000488186 FAM89BQ8N5H3 189 aa12.92□□□□□ -0.34
C9orf3-219ENST00000488186 Q8N7P7 452 aa12.92□□□□□ -0.34
C9orf3-219ENST00000488186 RAB2BQ8WUD1 216 aa12.92□□□□□ -0.34
C9orf3-219ENST00000488186 CCDC107Q8WV48 283 aa12.92□□□□□ -0.34
C9orf3-219ENST00000488186 CORO2AQ92828 525 aa12.92□□□□□ -0.34
C9orf3-219ENST00000488186 FAAP24Q9BTP7 215 aa12.92□□□□□ -0.34
C9orf3-219ENST00000488186 NCOR1P1Q9H4R4 102 aa12.92□□□□□ -0.34
C9orf3-219ENST00000488186 OCEL1Q9H607 264 aa12.92□□□□□ -0.34
C9orf3-219ENST00000488186 CHMP1AQ9HD42 196 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-219ENST00000488186 TAS2R3Q9NYW6 316 aa12.92□□□□□ -0.34
C9orf3-219ENST00000488186 ABRACLQ9P1F3 81 aa12.92□□□□□ -0.34
C9orf3-219ENST00000488186 ZNF729A6NN14 1252 aaPredicted RBP12.91□□□□□ -0.34
C9orf3-219ENST00000488186 C17orf98A8MV24 154 aa12.91□□□□□ -0.34
C9orf3-219ENST00000488186 PAHP00439 452 aa12.91□□□□□ -0.34
C9orf3-219ENST00000488186 IFNA2P01563 188 aa12.91□□□□□ -0.34
C9orf3-219ENST00000488186 IGHV4-38-2P0DP08 117 aa12.91□□□□□ -0.34
C9orf3-219ENST00000488186 GZMHP20718 246 aa12.91□□□□□ -0.34
C9orf3-219ENST00000488186 EPHA1P21709 976 aa12.91□□□□□ -0.34
C9orf3-219ENST00000488186 EFNB2P52799 333 aa12.91□□□□□ -0.34
C9orf3-219ENST00000488186 TMBIM6P55061 237 aa12.91□□□□□ -0.34
C9orf3-219ENST00000488186 SCAND1P57086 179 aa12.91□□□□□ -0.34
C9orf3-219ENST00000488186 BPIFB3P59826 476 aa12.91□□□□□ -0.34
C9orf3-219ENST00000488186 CTF1Q16619 201 aa12.91□□□□□ -0.34
C9orf3-219ENST00000488186 SIGIRRQ6IA17 410 aa12.91□□□□□ -0.34
C9orf3-219ENST00000488186 ZNF782Q6ZMW2 699 aaPredicted RBP12.91□□□□□ -0.34
C9orf3-219ENST00000488186 ZNF497Q6ZNH5 498 aa12.91□□□□□ -0.34
C9orf3-219ENST00000488186 C6orf201Q7Z4U5 140 aa12.91□□□□□ -0.34
C9orf3-219ENST00000488186 OR13D1Q8NGV5 346 aa12.91□□□□□ -0.34
C9orf3-219ENST00000488186 LGALS14Q8TCE9 139 aa12.91□□□□□ -0.34
C9orf3-219ENST00000488186 MRGPRDQ8TDS7 321 aa12.91□□□□□ -0.34
C9orf3-219ENST00000488186 SLC25A46Q96AG3 418 aa12.91□□□□□ -0.34
C9orf3-219ENST00000488186 DCSTAMPQ9H295 470 aa12.91□□□□□ -0.34
C9orf3-219ENST00000488186 ETV7Q9Y603 341 aa12.91□□□□□ -0.34
C9orf3-219ENST00000488186 A0A0A6YYD4 124 aa12.9□□□□□ -0.34
C9orf3-219ENST00000488186 TRAV39A0A0B4J263 110 aa12.9□□□□□ -0.34
C9orf3-219ENST00000488186 CENPVL3A0A0U1RRI6 287 aa12.9□□□□□ -0.34
C9orf3-219ENST00000488186 SCGNO76038 276 aa12.9□□□□□ -0.34
C9orf3-219ENST00000488186 RBP4P02753 201 aa12.9□□□□□ -0.34
C9orf3-219ENST00000488186 MT-ND4P03905 459 aa12.9□□□□□ -0.34
C9orf3-219ENST00000488186 PAX5Q02548 391 aa12.9□□□□□ -0.34
C9orf3-219ENST00000488186 PRB3Q04118 309 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-219ENST00000488186 PLA2G7Q13093 441 aa12.9□□□□□ -0.34
C9orf3-219ENST00000488186 KLF17Q5JT82 389 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-219ENST00000488186 OR52W1Q6IF63 320 aa12.9□□□□□ -0.34
C9orf3-219ENST00000488186 OR10R2Q8NGX6 335 aa12.9□□□□□ -0.34
C9orf3-219ENST00000488186 OR4K15Q8NH41 348 aa12.9□□□□□ -0.34
C9orf3-219ENST00000488186 RAB3CQ96E17 227 aa12.9□□□□□ -0.34
C9orf3-219ENST00000488186 BCL7BQ9BQE9 202 aa12.9□□□□□ -0.34
C9orf3-219ENST00000488186 SULT4A1Q9BR01 284 aa12.9□□□□□ -0.34
C9orf3-219ENST00000488186 RAB9BQ9NP90 201 aa12.9□□□□□ -0.34
C9orf3-219ENST00000488186 KCNIP1Q9NZI2 227 aa12.9□□□□□ -0.34
C9orf3-219ENST00000488186 HSF4Q9ULV5 492 aa12.9□□□□□ -0.34
C9orf3-219ENST00000488186 ATRQ13535 2644 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 A0A075B6Q4 140 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 IGHV1-69DA0A0B4J2H0 117 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 KBTBD11-OT1A0A1B0GTJ5 212 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 A0A1W2PRD5 423 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 A0A1W2PRF3 423 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 A0A1W2PRM7 423 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 CLPXO76031 633 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 IGHV1-69P01742 117 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 IGHV1-8P0DP01 117 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 COX7A1P24310 79 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 CDK2P24941 298 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 SOX6P35712 828 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 UBE2E1P51965 193 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 DLX1P56177 255 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 DLX6P56179 175 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 LGALS4P56470 323 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 KLRD1Q13241 179 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 ARL6IP1Q15041 203 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 C6orf183Q5T699 404 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 RBMS3Q6XE24 437 aaKnown RBP12.89□□□□□ -0.35
C9orf3-219ENST00000488186 BRD3OSQ6XYD6 125 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 OR13A1Q8NGR1 328 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 NDNFQ8TB73 568 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 SETD6Q8TBK2 473 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 C22orf15Q8WYQ4 148 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 DYRK2Q92630 601 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 ARHGAP5-AS1Q96IT6 56 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 PECRQ9BY49 303 aa12.89□□□□□ -0.35
C9orf3-219ENST00000488186 RIMS4Q9H426 269 aaPredicted RBP12.89□□□□□ -0.35
C9orf3-219ENST00000488186 UNKLQ9H9P5 680 aaKnown RBP12.89□□□□□ -0.35
C9orf3-219ENST00000488186 RHBDL2Q9NX52 303 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms