RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 HDHD3Q9BSH5 251 aaPredicted RBP14□□□□□ -0.17
SHROOM1-205ENST00000488072 ZNRD1Q9P1U0 126 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 LINC00312Q9Y6C7 94 aa14□□□□□ -0.17
SHROOM1-205ENST00000488072 MXRA5Q9NR99 2828 aa13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 A0A0U1RQK1 487 aa13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 PDCD6O75340 191 aa13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 VENTXO95231 258 aa13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 MT-ND4P03905 459 aa13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 CSN2P05814 226 aa13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 CGB3P0DN86 165 aa13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 CGB7P0DN87 165 aa13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 BLVRBP30043 206 aaPredicted RBP13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 PLAC9Q5JTB6 97 aa13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 OR2W3Q7Z3T1 314 aa13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 LINC00596Q86U02 117 aa13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 CMTM4Q8IZR5 234 aa13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 LGALS14Q8TCE9 139 aa13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 TAF15Q92804 592 aaKnown RBP eCLIP13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 AJUBAQ96IF1 538 aa13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 SUCNR1Q9BXA5 334 aa13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 MS4A7Q9GZW8 240 aaPredicted RBP13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 ESM1Q9NQ30 184 aa13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 PCDHB16Q9NRJ7 776 aa13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 ETAA1Q9NY74 926 aa13.99□□□□□ -0.17
SHROOM1-205ENST00000488072 MCRIP1C9JLW8 97 aa13.98□□□□□ -0.17
SHROOM1-205ENST00000488072 IGHV1-8P0DP01 117 aa13.98□□□□□ -0.17
SHROOM1-205ENST00000488072 FUT3P21217 361 aa13.98□□□□□ -0.17
SHROOM1-205ENST00000488072 CDK2P24941 298 aa13.98□□□□□ -0.17
SHROOM1-205ENST00000488072 SSTR5P35346 364 aa13.98□□□□□ -0.17
SHROOM1-205ENST00000488072 SERPINB10P48595 397 aa13.98□□□□□ -0.17
SHROOM1-205ENST00000488072 PSMD7P51665 324 aa13.98□□□□□ -0.17
SHROOM1-205ENST00000488072 IDNKQ5T6J7 187 aa13.98□□□□□ -0.17
SHROOM1-205ENST00000488072 GPR157Q5UAW9 335 aa13.98□□□□□ -0.17
SHROOM1-205ENST00000488072 FAM89BQ8N5H3 189 aa13.98□□□□□ -0.17
SHROOM1-205ENST00000488072 CORO2AQ92828 525 aa13.98□□□□□ -0.17
SHROOM1-205ENST00000488072 LEAP2Q969E1 77 aa13.98□□□□□ -0.17
SHROOM1-205ENST00000488072 ARHGAP5-AS1Q96IT6 56 aa13.98□□□□□ -0.17
SHROOM1-205ENST00000488072 BARHL1Q9BZE3 327 aa13.98□□□□□ -0.17
SHROOM1-205ENST00000488072 METTL8Q9H825 291 aaKnown RBP13.98□□□□□ -0.17
SHROOM1-205ENST00000488072 ELF5Q9UKW6 265 aaPredicted RBP13.98□□□□□ -0.17
SHROOM1-205ENST00000488072 TRGV10A0A0A0MS01 117 aa13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 TMEM30CPA0ZSE6 113 aa13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 RCC1P18754 421 aaPredicted RBP13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 CFPP27918 469 aa13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 BLMHQ13867 455 aa13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 CTF1Q16619 201 aa13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 TUSC1Q2TAM9 212 aa13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 SLC35E4Q6ICL7 350 aa13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 ZNF497Q6ZNH5 498 aa13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 GDPGP1Q6ZNW5 385 aa13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 C1orf122Q6ZSJ8 110 aa13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 LHFPL4Q7Z7J7 247 aa13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 TPRA1Q86W33 373 aa13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 DTX3Q8N9I9 347 aa13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 NDNFQ8TB73 568 aa13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 MRPL30Q8TCC3 161 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 UNKLQ9H9P5 680 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 ZMAT3Q9HA38 289 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 TNFRSF19Q9NS68 423 aa13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 AK3Q9UIJ7 227 aa13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 UBE2J1Q9Y385 318 aaPredicted RBP13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 KIAA2026Q5HYC2 2103 aa13.97□□□□□ -0.17
SHROOM1-205ENST00000488072 DSCAML1Q8TD84 2053 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 FAM90A10PA6NDY2 464 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 FAM90A18PA6NE21 464 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 FAM90A16PA6NEW6 464 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 FAM90A20PA6NIJ5 464 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 FAM90A8PA6NJQ4 464 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 FAM90A7PA6NKC0 464 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 FAM90A22PA8MWA6 464 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 FAM90A12PA8MX19 464 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 FAM90A5PA8MXJ8 464 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 FAM90A23PA8MXZ1 464 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 NPFFO15130 113 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 FAM90A15PP0C7V4 464 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 FAM90A13PP0C7W8 464 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 FAM90A14PP0C7W9 464 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 FAM90A24PP0C7X0 464 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 RIPPLY3P57055 190 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 TIMM50Q3ZCQ8 353 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 GPR141Q7Z602 305 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 ANKRD13BQ86YJ7 626 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 DYNAPQ8N1N2 210 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 NEDD4LQ96PU5 975 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 PECRQ9BY49 303 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 ZNF286AQ9HBT8 521 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 CALYQ9NYX4 217 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 FBLN5Q9UBX5 448 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 RAB22AQ9UL26 194 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 KCNK7Q9Y2U2 307 aa13.96□□□□□ -0.17
SHROOM1-205ENST00000488072 A0A075B6Q4 140 aa13.95□□□□□ -0.18
SHROOM1-205ENST00000488072 IGHV3-43A0A0B4J1X8 118 aa13.95□□□□□ -0.18
SHROOM1-205ENST00000488072 A0A1W2PPE3 182 aa13.95□□□□□ -0.18
SHROOM1-205ENST00000488072 C15orf65H3BRN8 121 aa13.95□□□□□ -0.18
SHROOM1-205ENST00000488072 RAB27BO00194 218 aa13.95□□□□□ -0.18
SHROOM1-205ENST00000488072 CLPXO76031 633 aa13.95□□□□□ -0.18
SHROOM1-205ENST00000488072 IGHV3-43DP0DP04 118 aa13.95□□□□□ -0.18
SHROOM1-205ENST00000488072 SAA4P35542 130 aa13.95□□□□□ -0.18
SHROOM1-205ENST00000488072 CLVS1Q8IUQ0 354 aaPredicted RBP13.95□□□□□ -0.18
SHROOM1-205ENST00000488072 ZDHHC22Q8N966 263 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms