RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 XKP51811 444 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 C2orf80Q0P641 193 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 WDR43Q15061 677 aaKnown RBP eCLIP0.52□□□□□ -2.335e-20■■■■■ 85.2
SMC4-219ENST00000487747 GUSBP1Q15486 140 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 OR8G1Q15617 311 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 ACTBL2Q562R1 376 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 ELP2Q6IA86 826 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 SLC25A45Q8N413 288 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 SPICQ8N5J4 248 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 ATPAF2Q8N5M1 289 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 CD200R1Q8TD46 325 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 DOK4Q8TEW6 326 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 FAM131CQ96AQ9 280 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 VAT1Q99536 393 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 ULBP1Q9BZM6 244 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 SLC19A3Q9BZV2 496 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 SLC25A31Q9H0C2 315 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 ALX4Q9H161 411 aaPredicted RBP0.52□□□□□ -2.33
SMC4-219ENST00000487747 FBXO44Q9H4M3 255 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 CHRAC1Q9NRG0 131 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 VAPAQ9P0L0 249 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 PSME2Q9UL46 239 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 HEY1Q9Y5J3 304 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 MTCH2Q9Y6C9 303 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 V9GYY9 64 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 ZNF638Q14966 1978 aaKnown RBP0.52□□□□□ -2.33
SMC4-219ENST00000487747 A0A1W2PPV4 95 aa0.51□□□□□ -2.33
SMC4-219ENST00000487747 H3BP45 60 aa0.51□□□□□ -2.33
SMC4-219ENST00000487747 EEF1E1O43324 174 aaKnown RBP0.51□□□□□ -2.33
SMC4-219ENST00000487747 PDCD6O75340 191 aa0.51□□□□□ -2.33
SMC4-219ENST00000487747 ANGP03950 147 aaKnown RBP0.51□□□□□ -2.33
SMC4-219ENST00000487747 SLC2A1P11166 492 aa0.51□□□□□ -2.33
SMC4-219ENST00000487747 CRABP1P29762 137 aa0.51□□□□□ -2.33
SMC4-219ENST00000487747 ARR3P36575 388 aa0.51□□□□□ -2.33
SMC4-219ENST00000487747 MAGEA6P43360 314 aa0.51□□□□□ -2.33
SMC4-219ENST00000487747 C1QTNF8P60827 252 aa0.51□□□□□ -2.33
SMC4-219ENST00000487747 BAXQ07812 192 aa0.51□□□□□ -2.33
SMC4-219ENST00000487747 DOC2AQ14183 400 aa0.51□□□□□ -2.33
SMC4-219ENST00000487747 NXNL2Q5VZ03 156 aa0.51□□□□□ -2.33
SMC4-219ENST00000487747 CLEC20AQ6ZU45 233 aa0.51□□□□□ -2.33
SMC4-219ENST00000487747 FAM58AQ8N1B3 248 aa0.51□□□□□ -2.33
SMC4-219ENST00000487747 MUC15Q8N387 334 aa0.51□□□□□ -2.33
SMC4-219ENST00000487747 C2orf73Q8N5S3 287 aaPredicted RBP0.51□□□□□ -2.33
SMC4-219ENST00000487747 ZFAND2AQ8N6M9 145 aa0.51□□□□□ -2.33
SMC4-219ENST00000487747 DRAXINQ8NBI3 349 aaPredicted RBP0.51□□□□□ -2.33
SMC4-219ENST00000487747 TMBIM1Q969X1 311 aa0.51□□□□□ -2.33
SMC4-219ENST00000487747 DDIT4LQ96D03 193 aa0.51□□□□□ -2.33
SMC4-219ENST00000487747 ATAD5Q96QE3 1844 aa0.51□□□□□ -2.33
SMC4-219ENST00000487747 SUCNR1Q9BXA5 334 aa0.51□□□□□ -2.33
SMC4-219ENST00000487747 NCOR1P1Q9H4R4 102 aa0.51□□□□□ -2.33
SMC4-219ENST00000487747 IGKV1-12A0A0C4DH73 117 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 A0A0G2JQZ4 141 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 A0A0J9YX75 114 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 IGSF23A1L1A6 192 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 DENRO43583 198 aaKnown RBP0.5□□□□□ -2.33
SMC4-219ENST00000487747 VAPBO95292 243 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 LTAP01374 205 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 IGKV1D-12P01611 117 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 IGKV5-2P06315 115 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 CRYGCP07315 174 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 S100A2P29034 98 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 RAB38P57729 211 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 APOFQ13790 326 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 TPRXLQ17RH7 258 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 FAM229BQ4G0N7 80 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 ACTL10Q5JWF8 245 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 HES3Q5TGS1 186 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 RESP18Q5W5W9 173 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 SLC25A25Q6KCM7 469 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 SDIM1Q6ZPB5 146 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 Q6ZRN7 208 aaPredicted RBP0.5□□□□□ -2.33
SMC4-219ENST00000487747 SSX7Q7RTT5 188 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 TCAIMQ8N3R3 496 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 OR4A15Q8NGL6 344 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 OR6N2Q8NGY6 317 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 CLHC1Q8NHS4 586 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 DCANP1Q8TF63 244 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 CASTOR1Q8WTX7 329 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 Q9BRP9 147 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 SYT4Q9H2B2 425 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 DIABLOQ9NR28 239 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 SDHAF2Q9NX18 166 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 FAM206AQ9NX38 181 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 TAS2R9Q9NYW1 312 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 IFNKQ9P0W0 207 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 BTRCQ9Y297 605 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 TBL2Q9Y4P3 447 aaKnown RBP0.5□□□□□ -2.33
SMC4-219ENST00000487747 OR51B4Q9Y5P0 310 aa0.5□□□□□ -2.33
SMC4-219ENST00000487747 FN1P02751 2386 aaKnown RBP0.49□□□□□ -2.33
SMC4-219ENST00000487747 PTPRKQ15262 1439 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 GSTTP1A0A1W2PQM5 241 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 J3QLI3 93 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 RFXANKO14593 260 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 BGNP21810 368 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 TSPOP30536 169 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 GTF2H1P32780 548 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 INPP1P49441 399 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 HTR4Q13639 388 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 CEACAM21Q3KPI0 293 aa0.49□□□□□ -2.33
SMC4-219ENST00000487747 NKAIN1Q4KMZ8 207 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms