RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 TPRX1Q8N7U7 411 aa10.96□□□□□ -0.65
COL4A6-207ENST00000487645 PLPPR1Q8TBJ4 325 aa10.96□□□□□ -0.65
COL4A6-207ENST00000487645 RAB3CQ96E17 227 aa10.96□□□□□ -0.65
COL4A6-207ENST00000487645 WDFY2Q96P53 400 aa10.96□□□□□ -0.65
COL4A6-207ENST00000487645 SULT4A1Q9BR01 284 aa10.96□□□□□ -0.65
COL4A6-207ENST00000487645 SIRPDQ9H106 197 aa10.96□□□□□ -0.65
COL4A6-207ENST00000487645 ETAA1Q9NY74 926 aa10.96□□□□□ -0.65
COL4A6-207ENST00000487645 TAS2R3Q9NYW6 316 aa10.96□□□□□ -0.65
COL4A6-207ENST00000487645 OPN4Q9UHM6 478 aa10.96□□□□□ -0.65
COL4A6-207ENST00000487645 MEIKINA0A087WXM9 373 aa10.95□□□□□ -0.66
COL4A6-207ENST00000487645 UBE2QL1A1L167 161 aa10.95□□□□□ -0.66
COL4A6-207ENST00000487645 POM121CA8CG34 1229 aa10.95□□□□□ -0.66
COL4A6-207ENST00000487645 C17orf98A8MV24 154 aa10.95□□□□□ -0.66
COL4A6-207ENST00000487645 TOX4O94842 621 aa10.95□□□□□ -0.66
COL4A6-207ENST00000487645 ZNF728P0DKX0 622 aa10.95□□□□□ -0.66
COL4A6-207ENST00000487645 CGB3P0DN86 165 aa10.95□□□□□ -0.66
COL4A6-207ENST00000487645 CGB7P0DN87 165 aa10.95□□□□□ -0.66
COL4A6-207ENST00000487645 MMP9P14780 707 aa10.95□□□□□ -0.66
COL4A6-207ENST00000487645 PLAC9Q5JTB6 97 aa10.95□□□□□ -0.66
COL4A6-207ENST00000487645 UBE2NLQ5JXB2 153 aa10.95□□□□□ -0.66
COL4A6-207ENST00000487645 NKAPLQ5M9Q1 402 aa10.95□□□□□ -0.66
COL4A6-207ENST00000487645 PHF21AQ96BD5 680 aa10.95□□□□□ -0.66
COL4A6-207ENST00000487645 SLC25A38Q96DW6 304 aa10.95□□□□□ -0.66
COL4A6-207ENST00000487645 S100A16Q96FQ6 103 aaKnown RBP10.95□□□□□ -0.66
COL4A6-207ENST00000487645 ARHGAP5-AS1Q96IT6 56 aa10.95□□□□□ -0.66
COL4A6-207ENST00000487645 PECRQ9BY49 303 aa10.95□□□□□ -0.66
COL4A6-207ENST00000487645 RIMS4Q9H426 269 aaPredicted RBP10.95□□□□□ -0.66
COL4A6-207ENST00000487645 UNKLQ9H9P5 680 aaKnown RBP10.95□□□□□ -0.66
COL4A6-207ENST00000487645 DIABLOQ9NR28 239 aa10.95□□□□□ -0.66
COL4A6-207ENST00000487645 CCDC59Q9P031 241 aaKnown RBP10.95□□□□□ -0.66
COL4A6-207ENST00000487645 ONECUT1Q9UBC0 465 aa10.95□□□□□ -0.66
COL4A6-207ENST00000487645 KIF25Q9UIL4 384 aa10.95□□□□□ -0.66
COL4A6-207ENST00000487645 ZNF729A6NN14 1252 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-207ENST00000487645 AVPP01185 164 aa10.94□□□□□ -0.66
COL4A6-207ENST00000487645 APOA1P02647 267 aa10.94□□□□□ -0.66
COL4A6-207ENST00000487645 HNF1AP20823 631 aa10.94□□□□□ -0.66
COL4A6-207ENST00000487645 PRTN3P24158 256 aa10.94□□□□□ -0.66
COL4A6-207ENST00000487645 DLX6P56179 175 aa10.94□□□□□ -0.66
COL4A6-207ENST00000487645 ZNF273Q14593 569 aa10.94□□□□□ -0.66
COL4A6-207ENST00000487645 MOGAT2Q3SYC2 334 aa10.94□□□□□ -0.66
COL4A6-207ENST00000487645 FAM120AOSQ5T036 256 aa10.94□□□□□ -0.66
COL4A6-207ENST00000487645 C1orf229Q6ZS94 237 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-207ENST00000487645 TCF23Q7RTU1 214 aa10.94□□□□□ -0.66
COL4A6-207ENST00000487645 C11orf42Q8N5U0 333 aa10.94□□□□□ -0.66
COL4A6-207ENST00000487645 Q8N7P7 452 aa10.94□□□□□ -0.66
COL4A6-207ENST00000487645 SAMD12Q8N8I0 201 aa10.94□□□□□ -0.66
COL4A6-207ENST00000487645 UPRTQ96BW1 309 aa10.94□□□□□ -0.66
COL4A6-207ENST00000487645 ZNF714Q96N38 554 aa10.94□□□□□ -0.66
COL4A6-207ENST00000487645 GAL3ST2Q9H3Q3 398 aa10.94□□□□□ -0.66
COL4A6-207ENST00000487645 METTL8Q9H825 291 aaKnown RBP10.94□□□□□ -0.66
COL4A6-207ENST00000487645 LINC00574Q9H8X3 128 aa10.94□□□□□ -0.66
COL4A6-207ENST00000487645 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.94□□□□□ -0.66
COL4A6-207ENST00000487645 ING3Q9NXR8 418 aa10.94□□□□□ -0.66
COL4A6-207ENST00000487645 COMMD3Q9UBI1 195 aa10.94□□□□□ -0.66
COL4A6-207ENST00000487645 SONP18583 2426 aaKnown RBP10.94□□□□□ -0.66
COL4A6-207ENST00000487645 NIPBLQ6KC79 2804 aaeCLIP10.94□□□□□ -0.66
COL4A6-207ENST00000487645 NSD1Q96L73 2696 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-207ENST00000487645 TRBV6-6A0A0A6YYG2 114 aa10.93□□□□□ -0.66
COL4A6-207ENST00000487645 SERPINE3A8MV23 424 aa10.93□□□□□ -0.66
COL4A6-207ENST00000487645 NAPSAO96009 420 aa10.93□□□□□ -0.66
COL4A6-207ENST00000487645 GSTP1P09211 210 aaKnown RBP10.93□□□□□ -0.66
COL4A6-207ENST00000487645 HIST1H1DP16402 221 aaKnown RBP10.93□□□□□ -0.66
COL4A6-207ENST00000487645 CCL3L1P16619 93 aa10.93□□□□□ -0.66
COL4A6-207ENST00000487645 CDNFQ49AH0 187 aa10.93□□□□□ -0.66
COL4A6-207ENST00000487645 TRAT1Q6PIZ9 186 aa10.93□□□□□ -0.66
COL4A6-207ENST00000487645 TRAPPC6BQ86SZ2 158 aa10.93□□□□□ -0.66
COL4A6-207ENST00000487645 ZNF554Q86TJ5 538 aa10.93□□□□□ -0.66
COL4A6-207ENST00000487645 NANPQ8TBE9 248 aa10.93□□□□□ -0.66
COL4A6-207ENST00000487645 PCGF1Q9BSM1 259 aa10.93□□□□□ -0.66
COL4A6-207ENST00000487645 MBNL3Q9NUK0 354 aaKnown RBP10.93□□□□□ -0.66
COL4A6-207ENST00000487645 AK3Q9UIJ7 227 aa10.93□□□□□ -0.66
COL4A6-207ENST00000487645 CDC42EP3Q9UKI2 254 aa10.93□□□□□ -0.66
COL4A6-207ENST00000487645 TRAPPC2LQ9UL33 140 aa10.93□□□□□ -0.66
COL4A6-207ENST00000487645 KCNK7Q9Y2U2 307 aa10.93□□□□□ -0.66
COL4A6-207ENST00000487645 A0A075B6Q4 140 aa10.92□□□□□ -0.66
COL4A6-207ENST00000487645 KBTBD11-OT1A0A1B0GTJ5 212 aa10.92□□□□□ -0.66
COL4A6-207ENST00000487645 A6NHS1 94 aa10.92□□□□□ -0.66
COL4A6-207ENST00000487645 MFNGO00587 321 aa10.92□□□□□ -0.66
COL4A6-207ENST00000487645 XRCC3O43542 346 aa10.92□□□□□ -0.66
COL4A6-207ENST00000487645 ORC5O43913 435 aa10.92□□□□□ -0.66
COL4A6-207ENST00000487645 GNB3P16520 340 aa10.92□□□□□ -0.66
COL4A6-207ENST00000487645 BPIFB3P59826 476 aa10.92□□□□□ -0.66
COL4A6-207ENST00000487645 ERVFRD-1P60508 538 aa10.92□□□□□ -0.66
COL4A6-207ENST00000487645 ZNF260Q3ZCT1 412 aa10.92□□□□□ -0.66
COL4A6-207ENST00000487645 C6orf183Q5T699 404 aa10.92□□□□□ -0.66
COL4A6-207ENST00000487645 HEPN1Q6WQI6 88 aa10.92□□□□□ -0.66
COL4A6-207ENST00000487645 Q71RC1 249 aaPredicted RBP10.92□□□□□ -0.66
COL4A6-207ENST00000487645 VMO1Q7Z5L0 202 aa10.92□□□□□ -0.66
COL4A6-207ENST00000487645 OR10A7Q8NGE5 316 aa10.92□□□□□ -0.66
COL4A6-207ENST00000487645 OR13A1Q8NGR1 328 aa10.92□□□□□ -0.66
COL4A6-207ENST00000487645 MRPL30Q8TCC3 161 aaKnown RBP10.92□□□□□ -0.66
COL4A6-207ENST00000487645 DYRK2Q92630 601 aa10.92□□□□□ -0.66
COL4A6-207ENST00000487645 TBX15Q96SF7 602 aa10.92□□□□□ -0.66
COL4A6-207ENST00000487645 CMSS1Q9BQ75 279 aaKnown RBP10.92□□□□□ -0.66
COL4A6-207ENST00000487645 SLIRPQ9GZT3 109 aaKnown RBP10.92□□□□□ -0.66
COL4A6-207ENST00000487645 RAB9BQ9NP90 201 aa10.92□□□□□ -0.66
COL4A6-207ENST00000487645 BATF3Q9NR55 127 aa10.92□□□□□ -0.66
COL4A6-207ENST00000487645 TEP1Q99973 2627 aaKnown RBP10.92□□□□□ -0.66
COL4A6-207ENST00000487645 NAV3Q8IVL0 2385 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 TRAV18A0A075B6X5 111 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms