RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 MEX3AA1L020 520 aaKnown RBP22.3■■□□□ 1.16
HLA-C-208ENST00000487245 GLI4P10075 376 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 GNG3P63215 75 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 GUK1Q16774 197 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 ATP1A1-AS1Q5TC04 95 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 MEX3BQ6ZN04 569 aaKnown RBP22.3■■□□□ 1.16
HLA-C-208ENST00000487245 PIP4P1Q86T03 277 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 OR2C3Q8N628 320 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 ZNF565Q8N9K5 539 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 EGLN1Q9GZT9 426 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 GLRX2Q9NS18 164 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 UBE2J1Q9Y385 318 aaPredicted RBP22.3■■□□□ 1.16
HLA-C-208ENST00000487245 KNTC1P50748 2209 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 GPR179Q6PRD1 2367 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 COLCA2A8K830 154 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 MMP9P14780 707 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 WNT5AP41221 380 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 NHLH2Q02577 135 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 HIKESHIQ53FT3 197 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 C15orf54Q8N8G6 183 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 SNIP1Q8TAD8 396 aaKnown RBP22.3■■□□□ 1.16
HLA-C-208ENST00000487245 RXFP4Q8TDU9 374 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 SECTM1Q8WVN6 248 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 GMPPAQ96IJ6 420 aaPredicted RBP22.3■■□□□ 1.16
HLA-C-208ENST00000487245 PKIBQ9C010 78 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 ZNF552Q9H707 407 aaPredicted RBP22.3■■□□□ 1.16
HLA-C-208ENST00000487245 BIN3Q9NQY0 253 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 ARHGAP21Q5T5U3 1957 aa22.3■■□□□ 1.16
HLA-C-208ENST00000487245 WDFY3Q8IZQ1 3526 aa22.29■■□□□ 1.16
HLA-C-208ENST00000487245 PITX3O75364 302 aa22.29■■□□□ 1.16
HLA-C-208ENST00000487245 UCP1P25874 307 aa22.29■■□□□ 1.16
HLA-C-208ENST00000487245 ZNF695Q8IW36 515 aa22.29■■□□□ 1.16
HLA-C-208ENST00000487245 LFNGQ8NES3 379 aa22.29■■□□□ 1.16
HLA-C-208ENST00000487245 IL22RA2Q969J5 263 aa22.29■■□□□ 1.16
HLA-C-208ENST00000487245 AKR1E2Q96JD6 320 aa22.29■■□□□ 1.16
HLA-C-208ENST00000487245 ATP23Q9Y6H3 246 aa22.29■■□□□ 1.16
HLA-C-208ENST00000487245 SHANK1Q9Y566 2161 aa22.29■■□□□ 1.16
HLA-C-208ENST00000487245 NKX2-1P43699 371 aaPredicted RBP22.28■■□□□ 1.16
HLA-C-208ENST00000487245 IL24Q13007 206 aa22.28■■□□□ 1.16
HLA-C-208ENST00000487245 MDP1Q86V88 176 aa22.28■■□□□ 1.16
HLA-C-208ENST00000487245 BATF2Q8N1L9 274 aa22.28■■□□□ 1.16
HLA-C-208ENST00000487245 K7N7A8 449 aa22.28■■□□□ 1.16
HLA-C-208ENST00000487245 CRYBA1P05813 215 aa22.28■■□□□ 1.16
HLA-C-208ENST00000487245 HERPUD1Q15011 391 aa22.28■■□□□ 1.16
HLA-C-208ENST00000487245 RNFT1Q5M7Z0 435 aa22.28■■□□□ 1.16
HLA-C-208ENST00000487245 P4HA3Q7Z4N8 544 aa22.28■■□□□ 1.16
HLA-C-208ENST00000487245 SLC25A31Q9H0C2 315 aa22.28■■□□□ 1.16
HLA-C-208ENST00000487245 PLEKHF2Q9H8W4 249 aa22.28■■□□□ 1.16
HLA-C-208ENST00000487245 VPS13AQ96RL7 3174 aa22.27■■□□□ 1.16
HLA-C-208ENST00000487245 ZNHIT1O43257 154 aa22.27■■□□□ 1.16
HLA-C-208ENST00000487245 SCTP09683 121 aa22.27■■□□□ 1.16
HLA-C-208ENST00000487245 TNFSF10P50591 281 aa22.27■■□□□ 1.16
HLA-C-208ENST00000487245 ZNF616Q08AN1 781 aa22.27■■□□□ 1.16
HLA-C-208ENST00000487245 ZNF266Q14584 549 aa22.27■■□□□ 1.16
HLA-C-208ENST00000487245 TBC1D28Q2M2D7 210 aa22.27■■□□□ 1.16
HLA-C-208ENST00000487245 ZNF818PQ6ZRF7 136 aa22.27■■□□□ 1.16
HLA-C-208ENST00000487245 IQCF2Q8IXL9 164 aa22.27■■□□□ 1.16
HLA-C-208ENST00000487245 OR8G5Q8NG78 346 aa22.27■■□□□ 1.16
HLA-C-208ENST00000487245 HS3ST6Q96QI5 342 aa22.27■■□□□ 1.16
HLA-C-208ENST00000487245 SMDT1Q9H4I9 107 aa22.27■■□□□ 1.16
HLA-C-208ENST00000487245 ZNF407Q9C0G0 2248 aa22.27■■□□□ 1.16
HLA-C-208ENST00000487245 PRKACAP17612 351 aa22.26■■□□□ 1.15
HLA-C-208ENST00000487245 PPT1P50897 306 aa22.26■■□□□ 1.15
HLA-C-208ENST00000487245 MRPL49Q13405 166 aaKnown RBP22.26■■□□□ 1.15
HLA-C-208ENST00000487245 NMSQ5H8A3 153 aa22.26■■□□□ 1.15
HLA-C-208ENST00000487245 NEK7Q8TDX7 302 aa22.26■■□□□ 1.15
HLA-C-208ENST00000487245 SH3BGRL3Q9H299 93 aa22.26■■□□□ 1.15
HLA-C-208ENST00000487245 TUBA4BQ9H853 241 aa22.26■■□□□ 1.15
HLA-C-208ENST00000487245 LYRM2Q9NU23 88 aaPredicted RBP22.26■■□□□ 1.15
HLA-C-208ENST00000487245 CDRT15L2A8MXV6 281 aa22.26■■□□□ 1.15
HLA-C-208ENST00000487245 SYNGR1O43759 233 aa22.26■■□□□ 1.15
HLA-C-208ENST00000487245 TGFBR3Q03167 851 aa22.26■■□□□ 1.15
HLA-C-208ENST00000487245 GAPTQ8N292 157 aa22.26■■□□□ 1.15
HLA-C-208ENST00000487245 OR5D13Q8NGL4 314 aa22.26■■□□□ 1.15
HLA-C-208ENST00000487245 LILRB1Q8NHL6 650 aaPredicted RBP22.26■■□□□ 1.15
HLA-C-208ENST00000487245 PBDC1Q9BVG4 233 aa22.26■■□□□ 1.15
HLA-C-208ENST00000487245 PARP12Q9H0J9 701 aaKnown RBP22.26■■□□□ 1.15
HLA-C-208ENST00000487245 DNAJC13O75165 2243 aa22.25■■□□□ 1.15
HLA-C-208ENST00000487245 FRYLO94915 3013 aa22.25■■□□□ 1.15
HLA-C-208ENST00000487245 CFAP54Q96N23 3096 aa22.25■■□□□ 1.15
HLA-C-208ENST00000487245 PIGBOS1A0A0B4J2F0 54 aa22.25■■□□□ 1.15
HLA-C-208ENST00000487245 IGSF23A1L1A6 192 aa22.25■■□□□ 1.15
HLA-C-208ENST00000487245 WNT2P09544 360 aa22.25■■□□□ 1.15
HLA-C-208ENST00000487245 NOVA1P51513 510 aaKnown RBP22.25■■□□□ 1.15
HLA-C-208ENST00000487245 SPIN3Q5JUX0 258 aa22.25■■□□□ 1.15
HLA-C-208ENST00000487245 ZNF880Q6PDB4 577 aa22.25■■□□□ 1.15
HLA-C-208ENST00000487245 LHX6Q9UPM6 363 aa22.25■■□□□ 1.15
HLA-C-208ENST00000487245 IGKV1D-13A0A0B4J2D9 117 aa22.24■■□□□ 1.15
HLA-C-208ENST00000487245 IGKV1-6A0A0C4DH72 117 aa22.24■■□□□ 1.15
HLA-C-208ENST00000487245 FAM24AA6NFZ4 105 aa22.24■■□□□ 1.15
HLA-C-208ENST00000487245 UMAD1C9J7I0 102 aa22.24■■□□□ 1.15
HLA-C-208ENST00000487245 H0Y980 276 aa22.24■■□□□ 1.15
HLA-C-208ENST00000487245 GALR2O43603 387 aaPredicted RBP22.24■■□□□ 1.15
HLA-C-208ENST00000487245 SLC34A2O95436 690 aa22.24■■□□□ 1.15
HLA-C-208ENST00000487245 PRH1P02810 166 aa22.24■■□□□ 1.15
HLA-C-208ENST00000487245 IGKV1-13P0DP09 117 aa22.24■■□□□ 1.15
HLA-C-208ENST00000487245 VDAC1P21796 283 aa22.24■■□□□ 1.15
HLA-C-208ENST00000487245 ID3Q02535 119 aa22.24■■□□□ 1.15
HLA-C-208ENST00000487245 FAM58AQ8N1B3 248 aa22.24■■□□□ 1.15
HLA-C-208ENST00000487245 HSD17B11Q8NBQ5 300 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms