RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 FAM3BP58499 235 aaPredicted RBP6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 PAX5Q02548 391 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 SLC38A11Q08AI6 406 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 ZNF506Q5JVG8 444 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 TMEM183AQ8IXX5 376 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 ZNF611Q8N823 705 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 OR1L3Q8NH93 324 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 OR1F12Q8NHA8 337 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 CORO2AQ92828 525 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 ADIPOR1Q96A54 375 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 C10orf35Q96D05 121 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 C14orf144Q96I85 54 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 SHDQ96IW2 340 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 OR6C1Q96RD1 312 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 GABRG3Q99928 467 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 LYRM2Q9NU23 88 aaPredicted RBP6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 SNRNP200O75643 2136 aaKnown RBP6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 A0A0A6YYD4 124 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 F6UZH7 168 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 TCF21O43680 179 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 SYNGR2O43760 224 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 IGHV2-5P01817 119 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 IGHMP01871 453 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 RPLP1P05386 114 aaKnown RBP6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 S100A7P31151 101 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 MDH2P40926 338 aaKnown RBP6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 CLDN15P56746 228 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 KRTDAPP60985 99 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 TMEM183BQ1AE95 376 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 TMEM240Q5SV17 173 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 ZNF774Q6NX45 483 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 DMBX1Q8NFW5 382 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 FLVCR1-AS1Q8TAF5 88 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 BORCS7Q96B45 105 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 ALKBH3Q96Q83 286 aaPredicted RBP6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 ATG101Q9BSB4 218 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 ABHD14AQ9BUJ0 271 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 CCL28Q9NRJ3 127 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 CBLN4Q9NTU7 201 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 ERRFI1Q9UJM3 462 aaPredicted RBP6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 A0A1W2PPC4 97 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 MRPL33O75394 65 aaKnown RBP6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 CXCL1P09341 107 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 GABRG2P18507 467 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 OR10J1P30954 320 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 GABRA4P48169 554 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 CCR5P51681 352 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 SUMO1P63165 101 aaKnown RBP6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 CCL20P78556 96 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 TFF2Q03403 129 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 RTN4RL2Q86UN3 420 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 LRP11Q86VZ4 500 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 LHFPL1Q86WI0 220 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 HIST3H2BBQ8N257 126 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 TMEM222Q9H0R3 208 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 ASCL3Q9NQ33 180 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 LIN7CQ9NUP9 197 aaKnown RBP6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 TP53TG5Q9Y2B4 290 aa6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 TIMM8BQ9Y5J9 83 aaPredicted RBP6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 TCF20Q9UGU0 1960 aaKnown RBP6.68□□□□□ -1.34
COL6A4P1-202ENST00000487147 MARCH11A6NNE9 402 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 CA11O75493 328 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 LYL1P12980 280 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 RAB35Q15286 201 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 TMEM211Q6ICI0 200 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 CMTM2Q8TAZ6 248 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 MRPL30Q8TCC3 161 aaKnown RBP6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 RHBDD1Q8TEB9 315 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 ANAPC16Q96DE5 110 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 NEIL1Q96FI4 390 aaPredicted RBP6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 GNRHR2Q96P88 292 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 PCGF1Q9BSM1 259 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 WFDC1Q9HC57 220 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 MMP17Q9ULZ9 603 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 MRPS17Q9Y2R5 130 aaKnown RBP6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 COL4A4P53420 1690 aaPredicted RBP6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 A0A1W2PQF6 199 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 IGSF23A1L1A6 192 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 K7N7A8 449 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 DEGS1O15121 323 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 SOD3P08294 240 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 VHLLQ6RSH7 139 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 OR8G5Q8NG78 346 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 NAT6Q93015 286 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 MOB3AQ96BX8 217 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 AP1S3Q96PC3 154 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 TBX15Q96SF7 602 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 EGLN1Q9GZT9 426 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 P4HTMQ9NXG6 502 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 MYOTQ9UBF9 498 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 PTRH2Q9Y3E5 179 aaKnown RBP6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 CEP290O15078 2479 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 A0A0U1RQV5 110 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 PATE4P0C8F1 98 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 CNN1P51911 297 aaKnown RBP6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 DMWDQ09019 674 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 OR5I1Q13606 314 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 SSPNQ14714 243 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 GAB4Q2WGN9 574 aa6.67□□□□□ -1.34
COL6A4P1-202ENST00000487147 FFAR4Q5NUL3 377 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms