RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 C16orf47Q6ZP98 133 aaPredicted RBP9.18□□□□□ -0.94
CCDC171-208ENST00000486641 Q6ZSR6 202 aa9.18□□□□□ -0.94
CCDC171-208ENST00000486641 DDIT4LQ96D03 193 aa9.18□□□□□ -0.94
CCDC171-208ENST00000486641 ABHD14BQ96IU4 210 aa9.18□□□□□ -0.94
CCDC171-208ENST00000486641 AGMATQ9BSE5 352 aa9.18□□□□□ -0.94
CCDC171-208ENST00000486641 PLA2G2FQ9BZM2 168 aa9.18□□□□□ -0.94
CCDC171-208ENST00000486641 ZNF286AQ9HBT8 521 aa9.18□□□□□ -0.94
CCDC171-208ENST00000486641 ASCL3Q9NQ33 180 aa9.18□□□□□ -0.94
CCDC171-208ENST00000486641 RNF115Q9Y4L5 304 aa9.18□□□□□ -0.94
CCDC171-208ENST00000486641 IGKV3D-11A0A0A0MRZ8 115 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 KIR2DS5A0A0G2JLQ3 304 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 A0A0G2JNG1 304 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 CLEC18AA5D8T8 446 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 KIR2DS3K7RE56 304 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 ZNF737O75373 536 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 OR2J2O76002 312 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 TNFP01375 233 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 LCATP04180 440 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 CD33P20138 364 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 PLA2G5P39877 138 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 NPBWR2P48146 333 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 TMEM267Q0VDI3 215 aaPredicted RBP9.17□□□□□ -0.94
CCDC171-208ENST00000486641 C1orf61Q13536 156 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 KIR2DS5Q14953 304 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 PIGYQ3MUY2 71 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 NMSQ5H8A3 153 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 SPIN3Q5JUX0 258 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 FAM180AQ6UWF9 173 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 CLEC18CQ8NCF0 446 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 OR2T10Q8NGZ9 312 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 RPUSD4Q96CM3 377 aaKnown RBP9.17□□□□□ -0.94
CCDC171-208ENST00000486641 SDSLQ96GA7 329 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 MS4A10Q96PG2 267 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 DEFB118Q96PH6 123 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 ALKBH4Q9NXW9 302 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 IGKV1-27A0A075B6S5 117 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 A0A1W2PNV4 684 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 ANKUB1A6NFN9 424 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 GALR2O43603 387 aaPredicted RBP9.17□□□□□ -0.94
CCDC171-208ENST00000486641 TCF21O43680 179 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 LILRA1O75019 489 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 KBTBD11O94819 623 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 ZNF92Q03936 586 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 MYBPHQ13203 477 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 BATFQ16520 125 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 MRPL52Q86TS9 123 aaKnown RBP9.17□□□□□ -0.94
CCDC171-208ENST00000486641 PRSS58Q8IYP2 241 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 CISD2Q8N5K1 135 aaKnown RBP9.17□□□□□ -0.94
CCDC171-208ENST00000486641 ST8SIA1Q92185 356 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 MIEN1Q9BRT3 115 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 TAAR3PQ9P1P4 343 aa9.17□□□□□ -0.94
CCDC171-208ENST00000486641 PTRH2Q9Y3E5 179 aaKnown RBP9.17□□□□□ -0.94
CCDC171-208ENST00000486641 NCOA6Q14686 2063 aaPredicted RBP9.17□□□□□ -0.94
CCDC171-208ENST00000486641 LRP4O75096 1905 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 A0A0U1RQV5 110 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 MAP1LC3B2A6NCE7 125 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 SIAH2O43255 324 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 IL6RP08887 468 aaPredicted RBP9.16□□□□□ -0.94
CCDC171-208ENST00000486641 CTSSP25774 331 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 ZNF41P51814 821 aaPredicted RBP9.16□□□□□ -0.94
CCDC171-208ENST00000486641 OR5I1Q13606 314 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 KCNMB1Q16558 191 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 RSPO1Q2MKA7 263 aaPredicted RBP9.16□□□□□ -0.94
CCDC171-208ENST00000486641 CALHM1Q8IU99 346 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 ZNF295-AS1Q8N0V1 137 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 SCGB1C1Q8TD33 95 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 RASL10BQ96S79 203 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 OR2J1Q9GZK6 312 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 MAP1LC3BQ9GZQ8 125 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 OR51I2Q9H344 312 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 PARD6AQ9NPB6 346 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 SLC7A10Q9NS82 523 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 PLA2G3Q9NZ20 509 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 TDRD6O60522 2096 aaKnown RBP9.16□□□□□ -0.94
CCDC171-208ENST00000486641 C2orf16Q68DN1 1984 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 CCDC85CA6NKD9 419 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 VSTM2BA6NLU5 285 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 ZNF814B7Z6K7 855 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 TYMSP04818 313 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 MDH2P40926 338 aaKnown RBP9.16□□□□□ -0.94
CCDC171-208ENST00000486641 TFPI2P48307 235 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 TNFSF10P50591 281 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 CLDN17P56750 224 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 HIST1H3AP68431 136 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 DLX2Q07687 328 aaPredicted RBP9.16□□□□□ -0.94
CCDC171-208ENST00000486641 C9orf50Q5SZB4 431 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 CST9LP1Q5W188 147 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 ZNF818PQ6ZRF7 136 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 SLC22A18ASQ8N1D0 253 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 OR13H1Q8NG92 308 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 ZCCHC14Q8WYQ9 949 aaKnown RBP9.16□□□□□ -0.94
CCDC171-208ENST00000486641 IL22RA2Q969J5 263 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 GPR35Q9HC97 309 aa9.16□□□□□ -0.94
CCDC171-208ENST00000486641 A0A1W2PQF6 199 aa9.15□□□□□ -0.94
CCDC171-208ENST00000486641 TRAF3IP2O43734 574 aaPredicted RBP9.15□□□□□ -0.94
CCDC171-208ENST00000486641 IFNA1P01562 189 aa9.15□□□□□ -0.94
CCDC171-208ENST00000486641 FOSL2P15408 326 aa9.15□□□□□ -0.94
CCDC171-208ENST00000486641 VDAC1P21796 283 aa9.15□□□□□ -0.94
CCDC171-208ENST00000486641 CD82P27701 267 aa9.15□□□□□ -0.94
CCDC171-208ENST00000486641 FBXW4P57775 412 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms