RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 TRAPPC2LQ9UL33 140 aa18.21■□□□□ 0.51
TRADD-202ENST00000486556 C17orf100A8MU93 164 aa18.2■□□□□ 0.5
TRADD-202ENST00000486556 PPYP01298 95 aa18.2■□□□□ 0.5
TRADD-202ENST00000486556 RCC1P18754 421 aaPredicted RBP18.2■□□□□ 0.5
TRADD-202ENST00000486556 SERPINF1P36955 418 aa18.2■□□□□ 0.5
TRADD-202ENST00000486556 HLA-DRB3P79483 266 aa18.2■□□□□ 0.5
TRADD-202ENST00000486556 SLC38A6Q8IZM9 456 aa18.2■□□□□ 0.5
TRADD-202ENST00000486556 LINC01560Q8TB33 94 aa18.2■□□□□ 0.5
TRADD-202ENST00000486556 Q8TCH9 128 aa18.2■□□□□ 0.5
TRADD-202ENST00000486556 GCM1Q9NP62 436 aa18.2■□□□□ 0.5
TRADD-202ENST00000486556 RNF7Q9UBF6 113 aa18.2■□□□□ 0.5
TRADD-202ENST00000486556 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.19■□□□□ 0.5
TRADD-202ENST00000486556 SNAPC5O75971 98 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 TNFRSF1AP19438 455 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 NFYAP23511 347 aaPredicted RBP18.19■□□□□ 0.5
TRADD-202ENST00000486556 PRDX2P32119 198 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 SUPT4H1P63272 117 aaKnown RBP18.19■□□□□ 0.5
TRADD-202ENST00000486556 HERPUD1Q15011 391 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 SPRNQ5BIV9 151 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 SGPP2Q8IWX5 399 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 DMRTC2Q8IXT2 367 aaPredicted RBP18.19■□□□□ 0.5
TRADD-202ENST00000486556 OR5M8Q8NGP6 311 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 FXYD6Q9H0Q3 95 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 DNAJB11Q9UBS4 358 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 OPN4Q9UHM6 478 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.19■□□□□ 0.5
TRADD-202ENST00000486556 TMEM30CPA0ZSE6 113 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 DBX1A6NMT0 343 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 BET1O15155 118 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 TUSC2O75896 110 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 PSG2P11465 335 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 RPS2P15880 293 aaKnown RBP18.19■□□□□ 0.5
TRADD-202ENST00000486556 AADACP22760 399 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 CEBPDP49716 269 aaPredicted RBP18.19■□□□□ 0.5
TRADD-202ENST00000486556 PAX5Q02548 391 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 COL10A1Q03692 680 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 SRSF4Q08170 494 aaKnown RBP18.19■□□□□ 0.5
TRADD-202ENST00000486556 ATXN7L3Q14CW9 347 aaPredicted RBP18.19■□□□□ 0.5
TRADD-202ENST00000486556 BEX5Q5H9J7 111 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 OR5T2Q8NGG2 359 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 LILRB1Q8NHL6 650 aaPredicted RBP18.19■□□□□ 0.5
TRADD-202ENST00000486556 COQ8AQ8NI60 647 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 TOMM40LQ969M1 308 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 CABLES2Q9BTV7 478 aa18.19■□□□□ 0.5
TRADD-202ENST00000486556 TUBAL3A6NHL2 446 aa18.18■□□□□ 0.5
TRADD-202ENST00000486556 ZNF205O95201 554 aa18.18■□□□□ 0.5
TRADD-202ENST00000486556 SIX6O95475 246 aa18.18■□□□□ 0.5
TRADD-202ENST00000486556 EGR1P18146 543 aa18.18■□□□□ 0.5
TRADD-202ENST00000486556 APOBEC3AP31941 199 aaPredicted RBP18.18■□□□□ 0.5
TRADD-202ENST00000486556 FXYD4P59646 89 aa18.18■□□□□ 0.5
TRADD-202ENST00000486556 ABCA11PQ4W5N1 156 aa18.18■□□□□ 0.5
TRADD-202ENST00000486556 FAM209AQ5JX71 171 aa18.18■□□□□ 0.5
TRADD-202ENST00000486556 LY6G6FQ5SQ64 297 aa18.18■□□□□ 0.5
TRADD-202ENST00000486556 OR11L1Q8NGX0 322 aa18.18■□□□□ 0.5
TRADD-202ENST00000486556 PPP1R35Q8TAP8 253 aa18.18■□□□□ 0.5
TRADD-202ENST00000486556 RSRP1Q9BUV0 290 aa18.18■□□□□ 0.5
TRADD-202ENST00000486556 KCNIP3Q9Y2W7 256 aa18.18■□□□□ 0.5
TRADD-202ENST00000486556 TRBV6-7A0A0A0MS04 114 aa18.17■□□□□ 0.5
TRADD-202ENST00000486556 IGKV1-6A0A0C4DH72 117 aa18.17■□□□□ 0.5
TRADD-202ENST00000486556 CRYM-AS1A6NIL9 109 aa18.17■□□□□ 0.5
TRADD-202ENST00000486556 NPIPB11E5RHQ5 1161 aa18.17■□□□□ 0.5
TRADD-202ENST00000486556 E7EQL1 145 aa18.17■□□□□ 0.5
TRADD-202ENST00000486556 M0R233 179 aa18.17■□□□□ 0.5
TRADD-202ENST00000486556 RGS13O14921 159 aa18.17■□□□□ 0.5
TRADD-202ENST00000486556 CD177Q8N6Q3 437 aa18.17■□□□□ 0.5
TRADD-202ENST00000486556 OR11H4Q8NGC9 324 aa18.17■□□□□ 0.5
TRADD-202ENST00000486556 OR10J5Q8NHC4 309 aa18.17■□□□□ 0.5
TRADD-202ENST00000486556 G3V3Q6 166 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 IFNA2P01563 188 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 GRNP28799 593 aaKnown RBP18.16■□□□□ 0.5
TRADD-202ENST00000486556 PIGPP57054 158 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 CDSNQ15517 529 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 TESK1Q15569 626 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 DCAF12L2Q5VW00 463 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 KCTD9Q7L273 389 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 GALNT11Q8NCW6 608 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 FAM222BQ8WU58 562 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 SHARPINQ9H0F6 387 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 KCNIP1Q9NZI2 227 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 CHD3Q12873 2000 aaKnown RBP18.16■□□□□ 0.5
TRADD-202ENST00000486556 TEX13DA0A0J9YY54 714 aaPredicted RBP18.16■□□□□ 0.5
TRADD-202ENST00000486556 OR3A1P47881 315 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 HOXA4Q00056 320 aaPredicted RBP18.16■□□□□ 0.5
TRADD-202ENST00000486556 TLE1Q04724 770 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 SNTB1Q13884 538 aaKnown RBP18.16■□□□□ 0.5
TRADD-202ENST00000486556 SLC9A3R2Q15599 337 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 HMGN3Q15651 99 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 EFNB3Q15768 340 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 C4orf17Q53FE4 359 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 SNX22Q96L94 193 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 EGLN1Q9GZT9 426 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 MS4A5Q9H3V2 200 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 RAB18Q9NP72 206 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 PPP1R3CQ9UQK1 317 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 RNF115Q9Y4L5 304 aa18.16■□□□□ 0.5
TRADD-202ENST00000486556 ATRXP46100 2492 aa18.15■□□□□ 0.5
TRADD-202ENST00000486556 IGKV1D-17A0A075B6S4 117 aa18.15■□□□□ 0.5
TRADD-202ENST00000486556 IRF2P14316 349 aa18.15■□□□□ 0.5
TRADD-202ENST00000486556 TFF3Q07654 80 aa18.15■□□□□ 0.5
TRADD-202ENST00000486556 FAM185AQ8N0U4 392 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms