RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 PCDHB10Q9UN67 800 aa17.26■□□□□ 0.35
HPS3-206ENST00000486530 IGKV1-6A0A0C4DH72 117 aa17.25■□□□□ 0.35
HPS3-206ENST00000486530 C3orf80F5H4A9 247 aa17.25■□□□□ 0.35
HPS3-206ENST00000486530 GNRHRP30968 328 aa17.25■□□□□ 0.35
HPS3-206ENST00000486530 SRPXP78539 464 aa17.25■□□□□ 0.35
HPS3-206ENST00000486530 GLYATL2Q8WU03 294 aa17.25■□□□□ 0.35
HPS3-206ENST00000486530 MARVELD3Q96A59 401 aa17.25■□□□□ 0.35
HPS3-206ENST00000486530 MSI2Q96DH6 328 aaKnown RBP17.25■□□□□ 0.35
HPS3-206ENST00000486530 C18orf12Q96KH6 178 aa17.25■□□□□ 0.35
HPS3-206ENST00000486530 AQP10Q96PS8 301 aa17.25■□□□□ 0.35
HPS3-206ENST00000486530 CABLES2Q9BTV7 478 aa17.25■□□□□ 0.35
HPS3-206ENST00000486530 SLC25A32Q9H2D1 315 aa17.25■□□□□ 0.35
HPS3-206ENST00000486530 HES4Q9HCC6 221 aa17.25■□□□□ 0.35
HPS3-206ENST00000486530 SIRPB1O00241 398 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 GPR31O00270 319 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 SH2D1BO14796 132 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 MPPED1O15442 326 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 PHF1O43189 567 aaPredicted RBP17.24■□□□□ 0.35
HPS3-206ENST00000486530 CEACAM8P31997 349 aaPredicted RBP17.24■□□□□ 0.35
HPS3-206ENST00000486530 PLA2G5P39877 138 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 NAAAQ02083 359 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 LDLRAD3Q86YD5 345 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 SECTM1Q8WVN6 248 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 CNTNAP3BQ96NU0 1288 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 CNTNAP3Q9BZ76 1288 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 TLNRD1Q9H1K6 362 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 CEP295Q9C0D2 2601 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 C3orf85A0A1B0GTC6 90 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 KCNAB3O43448 404 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 C3orf36Q3SXR2 165 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 RGS7BPQ6MZT1 257 aaPredicted RBP17.24■□□□□ 0.35
HPS3-206ENST00000486530 PCSK4Q6UW60 755 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 ZNF497Q6ZNH5 498 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 C5orf24Q7Z6I8 188 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 PDZD9Q8IXQ8 264 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 Q8NA96 180 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 OR1S1Q8NH92 325 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 STOML3Q8TAV4 291 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 S100PBPQ96BU1 408 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 HEATR1Q9H583 2144 aaKnown RBP17.24■□□□□ 0.35
HPS3-206ENST00000486530 RAXQ9Y2V3 346 aa17.24■□□□□ 0.35
HPS3-206ENST00000486530 ANKRD11Q6UB99 2663 aaPredicted RBP17.24■□□□□ 0.35
HPS3-206ENST00000486530 hCG_1807616A0A1W2PRN6 198 aa17.23■□□□□ 0.35
HPS3-206ENST00000486530 FABP6P51161 128 aa17.23■□□□□ 0.35
HPS3-206ENST00000486530 TMPRSS3P57727 454 aa17.23■□□□□ 0.35
HPS3-206ENST00000486530 SMCO1Q147U7 214 aa17.23■□□□□ 0.35
HPS3-206ENST00000486530 TOR2AQ5JU69 321 aa17.23■□□□□ 0.35
HPS3-206ENST00000486530 GAPTQ8N292 157 aa17.23■□□□□ 0.35
HPS3-206ENST00000486530 SLC5A7Q9GZV3 580 aa17.23■□□□□ 0.35
HPS3-206ENST00000486530 PRR14LQ5THK1 2151 aa17.23■□□□□ 0.35
HPS3-206ENST00000486530 A0A1B0GWJ7 208 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 RCC1P18754 421 aaPredicted RBP17.22■□□□□ 0.35
HPS3-206ENST00000486530 MZT1Q08AG7 82 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 AANATQ16613 207 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 Q6ZR03 302 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 OR10J5Q8NHC4 309 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 CXorf58Q96LI9 332 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 TP53RKQ96S44 253 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 PFDN2Q9UHV9 154 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 GLS2Q9UI32 602 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 FZR1Q9UM11 496 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 BOD1L1Q8NFC6 3051 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 IGKV1D-13A0A0B4J2D9 117 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 IGHV3-64DA0A0J9YX35 117 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 A0A1B0GW55 424 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 MSGN1A6NI15 193 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 NPIPB11E5RHQ5 1161 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 DEDDO75618 318 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 HAND1O96004 215 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 DUX4L2P0CJ85 424 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 DUX4L3P0CJ86 424 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 DUX4L4P0CJ87 422 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 DUX4L5P0CJ88 424 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 DUX4L6P0CJ89 424 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 DUX4L7P0CJ90 424 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 IGKV1-13P0DP09 117 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 ZNF818PQ6ZRF7 136 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 LYZL2Q7Z4W2 148 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 TBC1D26Q86UD7 250 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 C11orf53Q8IXP5 236 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 PLPPR1Q8TBJ4 325 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 KIRREL1Q96J84 757 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 SHARPINQ9H0F6 387 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 DUX4Q9UBX2 424 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 TMED3Q9Y3Q3 217 aa17.22■□□□□ 0.35
HPS3-206ENST00000486530 I3L521 148 aa17.21■□□□□ 0.35
HPS3-206ENST00000486530 TPT1P13693 172 aaKnown RBP17.21■□□□□ 0.35
HPS3-206ENST00000486530 ZNF83P51522 516 aa17.21■□□□□ 0.35
HPS3-206ENST00000486530 H1FOOQ8IZA3 346 aaPredicted RBP17.21■□□□□ 0.35
HPS3-206ENST00000486530 MUCL1Q96DR8 90 aa17.21■□□□□ 0.35
HPS3-206ENST00000486530 TMEM222Q9H0R3 208 aa17.21■□□□□ 0.35
HPS3-206ENST00000486530 OR2W1Q9Y3N9 320 aa17.21■□□□□ 0.35
HPS3-206ENST00000486530 A6NLC8 198 aa17.2■□□□□ 0.34
HPS3-206ENST00000486530 P2RX3P56373 397 aa17.2■□□□□ 0.34
HPS3-206ENST00000486530 SNTB1Q13884 538 aaKnown RBP17.2■□□□□ 0.34
HPS3-206ENST00000486530 C1QTNF12Q5T7M4 302 aa17.2■□□□□ 0.34
HPS3-206ENST00000486530 FOXRED2Q8IWF2 684 aa17.2■□□□□ 0.34
HPS3-206ENST00000486530 CMTM1Q8IZ96 169 aa17.2■□□□□ 0.34
HPS3-206ENST00000486530 CISD2Q8N5K1 135 aaKnown RBP17.2■□□□□ 0.34
HPS3-206ENST00000486530 LHFPL5Q8TAF8 219 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms