RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 RNF183Q96D59 192 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 MBOAT4Q96T53 435 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 OSBPL10Q9BXB5 764 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 PPIL3Q9H2H8 161 aaKnown RBP6.17□□□□□ -1.42
XRN1-212ENST00000486211 EGLN3Q9H6Z9 239 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 LINC00574Q9H8X3 128 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 PARP11Q9NR21 331 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 RBFOX1Q9NWB1 397 aaKnown RBP6.17□□□□□ -1.42
XRN1-212ENST00000486211 ETAA1Q9NY74 926 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 APOBP04114 4563 aaKnown RBP6.17□□□□□ -1.42
XRN1-212ENST00000486211 LRP1BQ9NZR2 4599 aa6.17□□□□□ -1.42
XRN1-212ENST00000486211 A0A1W2PN81 502 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 A0A1W2PPE3 182 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 FUOMA2VDF0 154 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 ACOD1A6NK06 481 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 ZNF785A8K8V0 405 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 DIRAS1O95057 198 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 OR2H2O95918 312 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 HLA-DRB1P01911 266 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 CSN2P05814 226 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 LYNP07948 512 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 CHRNA7P36544 502 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 CRIP2P52943 208 aaPredicted RBP6.16□□□□□ -1.42
XRN1-212ENST00000486211 NDPQ00604 133 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 CYP2R1Q6VVX0 501 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 SLC25A26Q70HW3 274 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 FKBP9P1Q75LS8 142 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 COMMD2Q86X83 199 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 YIPF7Q8N8F6 280 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 OR10X1Q8NGY0 326 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 OTOSQ8NHW6 89 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 TSEN15Q8WW01 171 aaKnown RBP6.16□□□□□ -1.42
XRN1-212ENST00000486211 SPACA5Q96QH8 159 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 SLC25A19Q9HC21 320 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 TAS2R1Q9NYW7 299 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 CALYQ9NYX4 217 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 IDI2-AS1Q9NZ38 188 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 COPS3Q9UNS2 423 aa6.16□□□□□ -1.42
XRN1-212ENST00000486211 TRBV2A0A0J9YWF9 115 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 FAM230AA0A1W2PPH8 454 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 TMEM120BA0PK00 339 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 A6NIN4 97 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 NPIPB11E5RHQ5 1161 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 IL1AP01583 271 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 CALCBP10092 127 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 ZP3P21754 424 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 HTR1FP30939 366 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 VHLP40337 213 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 SNU13P55769 128 aaKnown RBP6.15□□□□□ -1.42
XRN1-212ENST00000486211 SYNJ2BPP57105 145 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 TSPAN31Q12999 210 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 RBMY1FQ15415 496 aaKnown RBP6.15□□□□□ -1.42
XRN1-212ENST00000486211 KRBOX4Q5JUW0 171 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 SPIN3Q5JUX0 258 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 Q6ZSR3 168 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 FAM58AQ8N1B3 248 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 OR13A1Q8NGR1 328 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 OR2K2Q8NGT1 345 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 THEM6Q8WUY1 208 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 RTN4IP1Q8WWV3 396 aaPredicted RBP6.15□□□□□ -1.42
XRN1-212ENST00000486211 C7orf34Q96L11 122 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 C7orf26Q96N11 449 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 GGTLC1Q9BX51 225 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 PBOV1Q9GZY1 135 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 SLC2A8Q9NY64 477 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 SLC23A1Q9UHI7 598 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 APLNQ9ULZ1 77 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 FOXA2Q9Y261 457 aaPredicted RBP6.15□□□□□ -1.42
XRN1-212ENST00000486211 TP53TG1Q9Y2A0 90 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 CDH10Q9Y6N8 788 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 V9GYS6 101 aa6.15□□□□□ -1.42
XRN1-212ENST00000486211 A0A1B0GTI1 187 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 TMEM269A0A1B0GVZ9 245 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 SELENOFO60613 162 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 TTRP02766 147 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 H2AFXP16104 143 aaPredicted RBP6.14□□□□□ -1.43
XRN1-212ENST00000486211 PRKACAP17612 351 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 BCL3P20749 454 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 BMI1P35226 326 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 GLP1RP43220 463 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 TCTAP57738 103 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 APOFQ13790 326 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 UBE2V2Q15819 145 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 LTC4SQ16873 150 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 ECSCRQ19T08 205 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 CD300EQ496F6 205 aaPredicted RBP6.14□□□□□ -1.43
XRN1-212ENST00000486211 SLC16A12Q6ZSM3 486 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 SLC15A3Q8IY34 581 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 Q8IYB0 196 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 ZNF645Q8N7E2 425 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 OR14K1Q8NGZ2 314 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 MED20Q9H944 212 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 RANGRFQ9HD47 186 aaPredicted RBP6.14□□□□□ -1.43
XRN1-212ENST00000486211 SCRT2Q9NQ03 307 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 IL20Q9NYY1 176 aa6.14□□□□□ -1.43
XRN1-212ENST00000486211 NUFIP1Q9UHK0 495 aaKnown RBP6.14□□□□□ -1.43
XRN1-212ENST00000486211 FAM32AQ9Y421 112 aaKnown RBP6.14□□□□□ -1.43
XRN1-212ENST00000486211 PRR32B1ATL7 298 aa6.13□□□□□ -1.43
XRN1-212ENST00000486211 CXCR6O00574 342 aa6.13□□□□□ -1.43
XRN1-212ENST00000486211 SH2D1BO14796 132 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms