RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 A0A0B4J2E0 115 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 A0A0X1KG70 313 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 A0A1B0GX12 115 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 A1L4Q6 167 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 C10orf142B7Z368 130 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 G3V4G9 280 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 H7C2Y5 167 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 CRXO43186 299 aaPredicted RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 ARL6IP5O75915 188 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 SLC22A5O76082 557 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 ATG12O94817 140 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 VENTXO95231 258 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 SLC2A10O95528 541 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 PAK4O96013 591 aaPredicted RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 EIF4EP06730 217 aaKnown RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 NGFRP08138 427 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 UCHL1P09936 223 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 NHLRC4P0CG21 123 aaPredicted RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 SULT1A3P0DMM9 295 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 SULT1A4P0DMN0 295 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 CPMP14384 443 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 WT1P19544 449 aaPredicted RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 CHATP28329 748 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 SHC1P29353 583 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 CCKARP32238 428 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 INPP1P49441 399 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 CAV3P56539 151 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 KLF3P57682 345 aaPredicted RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 KRTAP10-6P60371 365 aaPredicted RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 RPS20P60866 119 aaKnown RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 GNG3P63215 75 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 ZNF85Q03923 595 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 RGS1Q08116 209 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 MFGE8Q08431 387 aaPredicted RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 ZNF616Q08AN1 781 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 FHL1Q13642 323 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 KLF9Q13886 244 aaPredicted RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 KIR2DS3Q14952 304 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 CDK5R1Q15078 307 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 OR1Q1Q15612 314 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 OR1C1Q15619 314 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 CST6Q15828 149 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 PRSS8Q16651 343 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 DUSP5Q16690 384 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 TBC1D28Q2M2D7 210 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 ZNF791Q3KP31 576 aaPredicted RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 TMEM97Q5BJF2 176 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 TCEAL5Q5H9L2 206 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 TCTEX1D4Q5JR98 221 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 OR10J3Q5JRS4 329 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 CLLU1Q5K131 121 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 CLEC12AQ5QGZ9 265 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 MRPL2Q5T653 305 aaKnown RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 WDR25Q64LD2 544 aaPredicted RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 RPL22L1Q6P5R6 122 aaKnown RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 DNM1P46Q6ZS02 220 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 LANCL3Q6ZV70 420 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 SHFQ7M4L6 423 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 TCF24Q7RTU0 167 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 ABHD12Q8N2K0 398 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 CADM2Q8N3J6 435 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 OR2T27Q8NH04 317 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 OR56B4Q8NH76 319 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 DOK4Q8TEW6 326 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 C15orf40Q8WUR7 153 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 TMEM255BQ8WV15 326 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 SMIM4Q8WVI0 70 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 BADQ92934 168 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 OR2A5Q96R48 311 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 GPX7Q96SL4 187 aaPredicted RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 SIGMAR1Q99720 223 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 CMSS1Q9BQ75 279 aaKnown RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 WDR77Q9BQA1 342 aaPredicted RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 OR11A1Q9GZK7 315 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 MED28Q9H204 178 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 ABCG5Q9H222 651 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 OR51J1Q9H342 316 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 AAMDCQ9H7C9 122 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 HEXA-AS1Q9H8Q6 139 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 Q9H8V8 135 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 ISG20L2Q9H9L3 353 aaKnown RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 MED9Q9NWA0 146 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 RASL12Q9NYN1 266 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 B3GAT1Q9P2W7 334 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 PRODH2Q9UF12 536 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 POMT2Q9UKY4 750 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 SLC7A7Q9UM01 511 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 RCL1Q9Y2P8 373 aaKnown RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 RBM7Q9Y580 266 aaKnown RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 SIRT4Q9Y6E7 314 aaPredicted RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 CKAP5Q14008 2032 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 PLXND1Q9Y4D7 1925 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 PDE4DIPQ5VU43 2346 aa3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 YLPM1P49750 1951 aaKnown RBP3.41□□□□□ -1.86
PRPF38B-205ENST00000485810 A0A0G2JN53 185 aa3.4□□□□□ -1.86
PRPF38B-205ENST00000485810 A0A1B0GU03 582 aa3.4□□□□□ -1.86
PRPF38B-205ENST00000485810 TINCRA0A1B0GVN0 87 aa3.4□□□□□ -1.86
PRPF38B-205ENST00000485810 DAPL1A0PJW8 107 aa3.4□□□□□ -1.86
PRPF38B-205ENST00000485810 IGSF23A1L1A6 192 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms