RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 HERV-K104P61576 105 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 H3F3AP84243 136 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 NHLH2Q02577 135 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 ZFP36L1Q07352 338 aaKnown RBP4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 C1orf61Q13536 156 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 HNF4GQ14541 408 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 RAB35Q15286 201 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 NSDHLQ15738 373 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 TAF9Q16594 264 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 SP6Q3SY56 376 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 PHLDA2Q53GA4 152 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 ZNF542PQ5EBM4 170 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 NMSQ5H8A3 153 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 AKR1C8PQ5T2L2 129 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 TSPO2Q5TGU0 170 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 TMEM211Q6ICI0 200 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 OR2T2Q6IF00 324 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 TCEAL6Q6IPX3 200 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 CLEC9AQ6UXN8 241 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 LHFPL2Q6ZUX7 228 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 GALNTL5Q7Z4T8 443 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 DPPA2Q7Z7J5 298 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 MRPL52Q86TS9 123 aaKnown RBP4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 KMT5CQ86Y97 462 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 H1FOOQ8IZA3 346 aaPredicted RBP4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 MAML2Q8IZL2 1156 aaPredicted RBP4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 TMEM123Q8N131 208 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 FADS6Q8N9I5 356 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 ZFP62Q8NB50 900 aaPredicted RBP4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 NFAM1Q8NET5 270 aaPredicted RBP4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 Q8NFD4 153 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 GJC3Q8NFK1 279 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 OR5L1Q8NGL2 311 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 OR1L3Q8NH93 324 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 PLPPR1Q8TBJ4 325 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 ABHD5Q8WTS1 349 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 MBD3L1Q8WWY6 194 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 FRZBQ92765 325 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 TOMM40LQ969M1 308 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 PIGTQ969N2 578 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 ZNF799Q96GE5 643 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 ZNF845Q96IR2 970 aaPredicted RBP4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 TECTBQ96PL2 329 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 SIGLEC12Q96PQ1 595 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 TP53RKQ96S44 253 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 NEU1Q99519 415 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 NUDT22Q9BRQ3 303 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 PSMG3Q9BT73 122 aaPredicted RBP4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 NDUFAF3Q9BU61 184 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 RPP25Q9BUL9 199 aaKnown RBP4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 PARD6GQ9BYG4 376 aaPredicted RBP4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 TPSD1Q9BZJ3 242 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 ACTR3CQ9C0K3 210 aaPredicted RBP4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 ZNF700Q9H0M5 742 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 SRD5A3Q9H8P0 318 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 CALHM2Q9HA72 323 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 ZNF160Q9HCG1 818 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 PPP1R14DQ9NXH3 145 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 ZNF391Q9UJN7 358 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 NXT1Q9UKK6 140 aaKnown RBP4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 RNF150Q9ULK6 438 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 CA14Q9ULX7 337 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 MMP17Q9ULZ9 603 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 PIGLQ9Y2B2 252 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 SLCO1B1Q9Y6L6 691 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 X6R8D5 127 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 KIF26BQ2KJY2 2108 aa4.03□□□□□ -1.76
SMARCC1-206ENST00000485737 EXPH5Q8NEV8 1989 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 IGKV1-27A0A075B6S5 117 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 A0A1W2PPC4 97 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 A8MWP6 167 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 PROB1E7EW31 1015 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 H0Y980 276 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 H3BML4 177 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 TLX3O43711 291 aaPredicted RBP4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 SSSCA1O60232 199 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 TUSC2O75896 110 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 VAMP5O95183 116 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 TMEM50AO95807 157 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 GCGP01275 180 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 IFNA1P01562 189 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 TYMSP04818 313 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 CYC1P08574 325 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 CELA3BP08861 270 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 CD63P08962 238 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 FABP4P15090 132 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 VDAC1P21796 283 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 HOXA6P31267 233 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 OPRM1P35372 400 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 CD200P41217 278 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 DYNLT3P51808 116 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 RPL23AP62750 156 aaKnown RBP4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 VAMP2P63027 116 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 PLP2Q04941 152 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 DLX2Q07687 328 aaPredicted RBP4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 PRDX4Q13162 271 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 SHBQ15464 509 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 SSX2Q16385 188 aa4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 RSPO1Q2MKA7 263 aaPredicted RBP4.02□□□□□ -1.77
SMARCC1-206ENST00000485737 TRIM61Q5EBN2 209 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms