RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 SPINT4Q6UDR6 99 aa2.08□□□□□ -2.08
SMC4-215ENST00000484799 MTERF4Q7Z6M4 381 aaKnown RBP2.08□□□□□ -2.08
SMC4-215ENST00000484799 MUC15Q8N387 334 aa2.08□□□□□ -2.08
SMC4-215ENST00000484799 ZIC4Q8N9L1 334 aa2.08□□□□□ -2.08
SMC4-215ENST00000484799 OR2M3Q8NG83 312 aa2.08□□□□□ -2.08
SMC4-215ENST00000484799 OR4P4Q8NGL7 312 aa2.08□□□□□ -2.08
SMC4-215ENST00000484799 ITLN2Q8WWU7 325 aaPredicted RBP2.08□□□□□ -2.08
SMC4-215ENST00000484799 LINC01587Q99440 93 aa2.08□□□□□ -2.08
SMC4-215ENST00000484799 UPF3BQ9BZI7 483 aaKnown RBP2.08□□□□□ -2.08
SMC4-215ENST00000484799 DRC3Q9H069 523 aa2.08□□□□□ -2.08
SMC4-215ENST00000484799 OR51E2Q9H255 320 aa2.08□□□□□ -2.08
SMC4-215ENST00000484799 LINC00574Q9H8X3 128 aa2.08□□□□□ -2.08
SMC4-215ENST00000484799 IMP3Q9NV31 184 aaKnown RBP2.08□□□□□ -2.08
SMC4-215ENST00000484799 TMEM38BQ9NVV0 291 aa2.08□□□□□ -2.08
SMC4-215ENST00000484799 DMAC2Q9NW81 257 aa2.08□□□□□ -2.08
SMC4-215ENST00000484799 POMPQ9Y244 141 aa2.08□□□□□ -2.08
SMC4-215ENST00000484799 ZNF706Q9Y5V0 76 aaPredicted RBP2.08□□□□□ -2.08
SMC4-215ENST00000484799 TRIP11Q15643 1979 aa2.08□□□□□ -2.08
SMC4-215ENST00000484799 ATRNO75882 1429 aa2.08□□□□□ -2.08
SMC4-215ENST00000484799 OR6C70A6NIJ9 312 aa2.07□□□□□ -2.08
SMC4-215ENST00000484799 IGLL5B9A064 214 aa2.07□□□□□ -2.08
SMC4-215ENST00000484799 KLRC4-KLRK1H3BQV0 150 aa2.07□□□□□ -2.08
SMC4-215ENST00000484799 K7ERS5 55 aa2.07□□□□□ -2.08
SMC4-215ENST00000484799 POP7O75817 140 aaKnown RBP2.07□□□□□ -2.08
SMC4-215ENST00000484799 SOX14O95416 240 aa2.07□□□□□ -2.08
SMC4-215ENST00000484799 RNASE2P10153 161 aaKnown RBP2.07□□□□□ -2.08
SMC4-215ENST00000484799 ACTR1BP42025 376 aa2.07□□□□□ -2.08
SMC4-215ENST00000484799 GTF2BQ00403 316 aa2.07□□□□□ -2.08
SMC4-215ENST00000484799 BIKQ13323 160 aa2.07□□□□□ -2.08
SMC4-215ENST00000484799 ENDOGQ14249 297 aaKnown RBP2.07□□□□□ -2.08
SMC4-215ENST00000484799 DNLZQ5SXM8 178 aa2.07□□□□□ -2.08
SMC4-215ENST00000484799 FAM151BQ6UXP7 276 aa2.07□□□□□ -2.08
SMC4-215ENST00000484799 SPNS3Q6ZMD2 512 aa2.07□□□□□ -2.08
SMC4-215ENST00000484799 CLEC20AQ6ZU45 233 aa2.07□□□□□ -2.08
SMC4-215ENST00000484799 DPPA2Q7Z7J5 298 aa2.07□□□□□ -2.08
SMC4-215ENST00000484799 DAZ4Q86SG3 579 aaKnown RBP2.07□□□□□ -2.08
SMC4-215ENST00000484799 FUNDC1Q8IVP5 155 aa2.07□□□□□ -2.08
SMC4-215ENST00000484799 STOML3Q8TAV4 291 aa2.07□□□□□ -2.08
SMC4-215ENST00000484799 C2orf15Q8WU43 125 aaKnown RBP2.07□□□□□ -2.08
SMC4-215ENST00000484799 PYURFQ96I23 114 aa2.07□□□□□ -2.08
SMC4-215ENST00000484799 RBP7Q96R05 134 aa2.07□□□□□ -2.08
SMC4-215ENST00000484799 ULBP1Q9BZM6 244 aa2.07□□□□□ -2.08
SMC4-215ENST00000484799 METTL9Q9H1A3 318 aa2.07□□□□□ -2.08
SMC4-215ENST00000484799 DAZ1Q9NQZ3 744 aaKnown RBP2.07□□□□□ -2.08
SMC4-215ENST00000484799 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.07□□□□□ -2.08
SMC4-215ENST00000484799 TRAPPC1Q9Y5R8 145 aa2.07□□□□□ -2.08
SMC4-215ENST00000484799 SCN4AP35499 1836 aa2.06□□□□□ -2.08
SMC4-215ENST00000484799 IGKV3D-11A0A0A0MRZ8 115 aa2.06□□□□□ -2.08
SMC4-215ENST00000484799 IGHV3-21A0A0B4J1V1 117 aa2.06□□□□□ -2.08
SMC4-215ENST00000484799 IGHV3-43A0A0B4J1X8 118 aa2.06□□□□□ -2.08
SMC4-215ENST00000484799 A8MUU9 505 aa2.06□□□□□ -2.08
SMC4-215ENST00000484799 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.06□□□□□ -2.08
SMC4-215ENST00000484799 CCRL2O00421 344 aa2.06□□□□□ -2.08
SMC4-215ENST00000484799 FGF16O43320 207 aa2.06□□□□□ -2.08
SMC4-215ENST00000484799 HPGDSO60760 199 aa2.06□□□□□ -2.08
SMC4-215ENST00000484799 E2F6O75461 281 aa2.06□□□□□ -2.08
SMC4-215ENST00000484799 INPP1P49441 399 aa2.06□□□□□ -2.08
SMC4-215ENST00000484799 RPL14P50914 215 aaKnown RBP2.06□□□□□ -2.08
SMC4-215ENST00000484799 TMEM241Q24JQ0 296 aa2.06□□□□□ -2.08
SMC4-215ENST00000484799 AMN1Q8IY45 258 aa2.06□□□□□ -2.08
SMC4-215ENST00000484799 RPRMLQ8N4K4 120 aa2.06□□□□□ -2.08
SMC4-215ENST00000484799 C3orf22Q8N5N4 141 aa2.06□□□□□ -2.08
SMC4-215ENST00000484799 GATD1Q8NB37 220 aa2.06□□□□□ -2.08
SMC4-215ENST00000484799 OR8S1Q8NH09 359 aa2.06□□□□□ -2.08
SMC4-215ENST00000484799 PRSS27Q9BQR3 290 aa2.06□□□□□ -2.08
SMC4-215ENST00000484799 ZNF436Q9C0F3 470 aaPredicted RBP2.06□□□□□ -2.08
SMC4-215ENST00000484799 UBQLN4Q9NRR5 601 aa2.06□□□□□ -2.08
SMC4-215ENST00000484799 USE1Q9NZ43 259 aa2.06□□□□□ -2.08
SMC4-215ENST00000484799 IGHV1-45A0A0A0MS14 117 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 C16orf90A8MZG2 172 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 GOLGA8KD6RF30 607 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 F5H5P2 479 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 GOLGA8MH3BSY2 632 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 ZW10O43264 779 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 STX10O60499 249 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 NIPSNAP2O75323 286 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 EPPINO95925 133 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 OCM2P0CE71 109 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 ZNF3P17036 446 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 CFL1P23528 166 aaKnown RBP2.05□□□□□ -2.08
SMC4-215ENST00000484799 MAGEA2P43356 314 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 MAGOHP61326 146 aaKnown RBP2.05□□□□□ -2.08
SMC4-215ENST00000484799 UBE2IP63279 158 aaKnown RBP2.05□□□□□ -2.08
SMC4-215ENST00000484799 MGAT3Q09327 533 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 SKP2Q13309 424 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 ZNF235Q14590 738 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 MMDQ15546 238 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 TBC1D28Q2M2D7 210 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 SLC36A2Q495M3 483 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 TBPL2Q6SJ96 375 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 DRAM2Q6UX65 266 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 BRD3OSQ6XYD6 125 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 TMEM144Q7Z5S9 345 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 BLIDQ8IZY5 108 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 OR5K1Q8NHB7 308 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.05□□□□□ -2.08
SMC4-215ENST00000484799 CMTM5Q96DZ9 223 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 GPR22Q99680 433 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 PLA2G12AQ9BZM1 189 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 CHST5Q9GZS9 411 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms