RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 NKX6-3A6NJ46 265 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 CEACAM18A8MTB9 384 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 VWC2LB2RUY7 222 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 ZNF736B4DX44 427 aaPredicted RBP6.84□□□□□ -1.31
USP4-210ENST00000483212 F5H0A9 414 aaPredicted RBP6.84□□□□□ -1.31
USP4-210ENST00000483212 ADAM20O43506 726 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 NDUFA2O43678 99 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 PTTG1O95997 202 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 AKAIN1P0CW23 69 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 CGB3P0DN86 165 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 CGB7P0DN87 165 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 SPNP16150 400 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 RCC1P18754 421 aaPredicted RBP6.84□□□□□ -1.31
USP4-210ENST00000483212 TBPP20226 339 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 GIFP27352 417 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 HLA-DMAP28067 261 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 ERP29P30040 261 aaKnown RBP6.84□□□□□ -1.31
USP4-210ENST00000483212 SLC6A1P30531 599 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 GLIPR1P48060 266 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 P2RX3P56373 397 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 AP3S2P59780 193 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 IL13RA1P78552 427 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 HERPUD1Q15011 391 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 HMGN3Q15651 99 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 RGS21Q2M5E4 152 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 CR1LQ2VPA4 569 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 VAX1Q5SQQ9 334 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 FAAP20Q6NZ36 180 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 MOB1BQ7L9L4 216 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 MUC20Q8N307 709 aaPredicted RBP6.84□□□□□ -1.31
USP4-210ENST00000483212 TPRX1Q8N7U7 411 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 POC5Q8NA72 575 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 OR5AP2Q8NGF4 316 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 PPP1R35Q8TAP8 253 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 NEK7Q8TDX7 302 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 CHPT1Q8WUD6 406 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 RAB1CQ92928 201 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 MRGPRFQ96AM1 343 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 MED30Q96HR3 178 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 C7orf50Q9BRJ6 194 aaKnown RBP6.84□□□□□ -1.31
USP4-210ENST00000483212 ST6GALNAC5Q9BVH7 336 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 CHMP1AQ9HD42 196 aaPredicted RBP6.84□□□□□ -1.31
USP4-210ENST00000483212 IFT46Q9NQC8 304 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 KIF25Q9UIL4 384 aa6.84□□□□□ -1.31
USP4-210ENST00000483212 USF3Q68DE3 2245 aa6.84□□□□□ -1.32
USP4-210ENST00000483212 CSMD2Q7Z408 3487 aa6.84□□□□□ -1.32
USP4-210ENST00000483212 ODAMA1E959 279 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 NAP1L6A6NFF2 107 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 TRDCB7Z8K6 153 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 C15orf65H3BRN8 121 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 H7C1Q1 480 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 M0QYG6 137 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 DVL1O14640 695 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 TMPRSS2O15393 492 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 PPIHO43447 177 aaKnown RBP6.83□□□□□ -1.32
USP4-210ENST00000483212 WIPF1O43516 503 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 RAB3DO95716 219 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 PMP2P02689 132 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 WNT2P09544 360 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 SCTP09683 121 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 GSTT2P0CG29 244 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 HRH1P35367 487 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 GPR6P46095 362 aaPredicted RBP6.83□□□□□ -1.32
USP4-210ENST00000483212 INPP1P49441 399 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 DEFA1P59665 94 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 DEFA3P59666 94 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 HLA-DRB3P79483 266 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 MRPS15P82914 257 aaKnown RBP6.83□□□□□ -1.32
USP4-210ENST00000483212 EDDM3AQ14507 147 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 KCNJ8Q15842 424 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 PLA1AQ53H76 456 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 ACTBL2Q562R1 376 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 KRBOX4Q5JUW0 171 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 ZNF660Q6AZW8 331 aaPredicted RBP6.83□□□□□ -1.32
USP4-210ENST00000483212 OVCH2Q7RTZ1 564 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 SLC36A1Q7Z2H8 476 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 NRARPQ7Z6K4 114 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 PEG10Q86TG7 708 aaKnown RBP6.83□□□□□ -1.32
USP4-210ENST00000483212 GLCCI1Q86VQ1 547 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 KRTAP1-3Q8IUG1 177 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 TMEM185AQ8NFB2 350 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 OR5D13Q8NGL4 314 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 OR13A1Q8NGR1 328 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 OR56B4Q8NH76 319 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 CCDC107Q8WV48 283 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 COX4I2Q96KJ9 171 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 SLC6A7Q99884 636 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 DCTN5Q9BTE1 182 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 CABLES2Q9BTV7 478 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 ZNF286AQ9HBT8 521 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 BARX1Q9HBU1 254 aaPredicted RBP6.83□□□□□ -1.32
USP4-210ENST00000483212 SLC2A8Q9NY64 477 aa6.83□□□□□ -1.32
USP4-210ENST00000483212 SLC25A10Q9UBX3 287 aaPredicted RBP6.83□□□□□ -1.32
USP4-210ENST00000483212 APCP25054 2843 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 AKAP6Q13023 2319 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 MEIKINA0A087WXM9 373 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 KIR2DS1A0A191URI9 304 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 C12orf77C9JDV5 145 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 NPIPB11E5RHQ5 1161 aa6.82□□□□□ -1.32
USP4-210ENST00000483212 FABP7O15540 132 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms