RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 GLI4P10075 376 aa12.31□□□□□ -0.44
CHD3-211ENST00000481999 PPP1CBP62140 327 aa12.31□□□□□ -0.44
CHD3-211ENST00000481999 ABCA11PQ4W5N1 156 aa12.31□□□□□ -0.44
CHD3-211ENST00000481999 LDLRAD3Q86YD5 345 aa12.31□□□□□ -0.44
CHD3-211ENST00000481999 OR5P3Q8WZ94 311 aa12.31□□□□□ -0.44
CHD3-211ENST00000481999 MRPL24Q96A35 216 aaKnown RBP12.31□□□□□ -0.44
CHD3-211ENST00000481999 ZNF442Q9H7R0 627 aa12.31□□□□□ -0.44
CHD3-211ENST00000481999 IL36GQ9NZH8 169 aa12.31□□□□□ -0.44
CHD3-211ENST00000481999 SNAPINO95295 136 aa12.31□□□□□ -0.44
CHD3-211ENST00000481999 CAV2P51636 162 aa12.31□□□□□ -0.44
CHD3-211ENST00000481999 PRR30Q53SZ7 412 aaPredicted RBP12.31□□□□□ -0.44
CHD3-211ENST00000481999 TMEM268Q5VZI3 342 aa12.31□□□□□ -0.44
CHD3-211ENST00000481999 OR2A2Q6IF42 318 aa12.31□□□□□ -0.44
CHD3-211ENST00000481999 OR1J1Q8NGS3 322 aa12.31□□□□□ -0.44
CHD3-211ENST00000481999 TOMM40LQ969M1 308 aa12.31□□□□□ -0.44
CHD3-211ENST00000481999 GALNT14Q96FL9 552 aa12.31□□□□□ -0.44
CHD3-211ENST00000481999 TLNRD1Q9H1K6 362 aa12.31□□□□□ -0.44
CHD3-211ENST00000481999 NAA60Q9H7X0 242 aa12.31□□□□□ -0.44
CHD3-211ENST00000481999 RHOFQ9HBH0 211 aa12.31□□□□□ -0.44
CHD3-211ENST00000481999 NDRG3Q9UGV2 375 aa12.31□□□□□ -0.44
CHD3-211ENST00000481999 TPRP12270 2363 aaKnown RBP12.3□□□□□ -0.44
CHD3-211ENST00000481999 ANKRD30BLA7E2S9 258 aa12.3□□□□□ -0.44
CHD3-211ENST00000481999 MED6O75586 246 aa12.3□□□□□ -0.44
CHD3-211ENST00000481999 H2AFB1P0C5Y9 115 aa12.3□□□□□ -0.44
CHD3-211ENST00000481999 FCGR2CP31995 323 aa12.3□□□□□ -0.44
CHD3-211ENST00000481999 SULT1A2P50226 295 aa12.3□□□□□ -0.44
CHD3-211ENST00000481999 FLI1Q01543 452 aaPredicted RBP12.3□□□□□ -0.44
CHD3-211ENST00000481999 PSG7Q13046 419 aa12.3□□□□□ -0.44
CHD3-211ENST00000481999 C22orf34Q6ZV56 151 aa12.3□□□□□ -0.44
CHD3-211ENST00000481999 TECTBQ96PL2 329 aa12.3□□□□□ -0.44
CHD3-211ENST00000481999 PLEKHA2Q9HB19 425 aa12.3□□□□□ -0.44
CHD3-211ENST00000481999 CDH20Q9HBT6 801 aa12.3□□□□□ -0.44
CHD3-211ENST00000481999 GLRX2Q9NS18 164 aa12.3□□□□□ -0.44
CHD3-211ENST00000481999 FBXL17Q9UF56 701 aa12.3□□□□□ -0.44
CHD3-211ENST00000481999 CGAP01215 116 aa12.3□□□□□ -0.44
CHD3-211ENST00000481999 RCC1P18754 421 aaPredicted RBP12.3□□□□□ -0.44
CHD3-211ENST00000481999 COX5AP20674 150 aa12.3□□□□□ -0.44
CHD3-211ENST00000481999 LPAR6P43657 344 aa12.3□□□□□ -0.44
CHD3-211ENST00000481999 SLC22A25Q6T423 547 aa12.3□□□□□ -0.44
CHD3-211ENST00000481999 RTN4IP1Q8WWV3 396 aaPredicted RBP12.3□□□□□ -0.44
CHD3-211ENST00000481999 SUCNR1Q9BXA5 334 aa12.3□□□□□ -0.44
CHD3-211ENST00000481999 AHRRA9YTQ3 701 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 HS3ST1O14792 307 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 TFF1P04155 84 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 CECR9P0C854 216 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 PRKACAP17612 351 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 UCP2P55851 309 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 FXYD4P59646 89 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 TMEM187Q14656 261 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 CISD2Q8N5K1 135 aaKnown RBP12.29□□□□□ -0.44
CHD3-211ENST00000481999 TMEM231Q9H6L2 316 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 ZNF286AQ9HBT8 521 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 PARP11Q9NR21 331 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 LSM5Q9Y4Y9 91 aaKnown RBP12.29□□□□□ -0.44
CHD3-211ENST00000481999 CACNA1DQ01668 2161 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 TRAV39A0A0B4J263 110 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 H7C2Y5 167 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 PDCD6O75340 191 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 TMEM33P57088 247 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 IGSF11Q5DX21 431 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 DHRS7BQ6IAN0 325 aaPredicted RBP12.29□□□□□ -0.44
CHD3-211ENST00000481999 TMEM88Q6PEY1 159 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 ZNF474Q6S9Z5 364 aaPredicted RBP12.29□□□□□ -0.44
CHD3-211ENST00000481999 LRTM2Q8N967 370 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 RDH5Q92781 318 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 HIST1H2AAQ96QV6 131 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 NRIP2Q9BQI9 281 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 PLSCR4Q9NRQ2 329 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 ZFP57Q9NU63 452 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 RCC2Q9P258 522 aaKnown RBP12.29□□□□□ -0.44
CHD3-211ENST00000481999 TINAGQ9UJW2 476 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 AMDHD2Q9Y303 409 aa12.29□□□□□ -0.44
CHD3-211ENST00000481999 E5RGE8 158 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 IGKV3-15P01624 115 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 OR5AC1P0C628 307 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 MUC1P15941 1255 aaPredicted RBP12.28□□□□□ -0.44
CHD3-211ENST00000481999 HOXC12P31275 282 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 FABP6P51161 128 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 C20orf204Q6ZNR8 217 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 KLF14Q8TD94 323 aaPredicted RBP12.28□□□□□ -0.44
CHD3-211ENST00000481999 GPHA2Q96T91 129 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 SYT3Q9BQG1 590 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 PROCRQ9UNN8 238 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 NSG2Q9Y328 171 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 FAM96BQ9Y3D0 163 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 PKDREJQ9NTG1 2253 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 CDIPTO14735 213 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 SCGB1D2O95969 90 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 FAM87AP0C7U9 286 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 PMELP40967 661 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 F2RL1P55085 397 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 BTNL8Q6UX41 500 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 DCHS2Q6V1P9 2916 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 UBAC2Q8NBM4 344 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 OR5A2Q8NGI9 324 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 POM121Q96HA1 1249 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 ADAT1Q9BUB4 502 aaKnown RBP12.28□□□□□ -0.44
CHD3-211ENST00000481999 MSL2Q9HCI7 577 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 SLC2A9Q9NRM0 540 aa12.28□□□□□ -0.44
CHD3-211ENST00000481999 POMT1Q9Y6A1 747 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms