RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	SPN	P16150	400 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	CFL1	P23528	166 aa	Known RBP	0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	CD40LG	P29965	261 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	LGALS7	P47929	136 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	DLX6	P56179	175 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	KLF3	P57682	345 aa	Predicted RBP	0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	SKP1	P63208	163 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	PRDX1	Q06830	199 aa	Known RBP	0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	SLAMF1	Q13291	335 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	TPBG	Q13641	420 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	PAFAH1B3	Q15102	231 aa	Known RBP	0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	SSX1	Q16384	188 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173		Q499Y3	187 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	DNAL1	Q4LDG9	190 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	SDHAF4	Q5VUM1	108 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	NXNL2	Q5VZ03	156 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	FAM104B	Q5XKR9	115 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	EPGN	Q6UW88	154 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	TMPPE	Q6ZT21	453 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	FAM183BP	Q6ZVS7	135 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	GALNT10	Q86SR1	603 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	LINC00596	Q86U02	117 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	ZBTB8OS	Q8IWT0	167 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	IQCF2	Q8IXL9	164 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	GAPT	Q8N292	157 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	CDRT4	Q8N9R6	151 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	LFNG	Q8NES3	379 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	OR4P4	Q8NGL7	312 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	OR4C13	Q8NGP0	309 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	OR2Y1	Q8NGV0	311 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	C2orf15	Q8WU43	125 aa	Known RBP	0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	CYGB	Q8WWM9	190 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	CLDN23	Q96B33	292 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	S100PBP	Q96BU1	408 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	CMTM5	Q96DZ9	223 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	CPB2	Q96IY4	423 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	PGLYRP3	Q96LB9	341 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	PPP1R36	Q96LQ0	422 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	ZNF75A	Q96N20	296 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	PEBP4	Q96S96	227 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	HBEGF	Q99075	208 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	TAPBPL	Q9BX59	468 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	EBPL	Q9BY08	206 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	METTL9	Q9H1A3	318 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	ABCG5	Q9H222	651 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	RDH14	Q9HBH5	336 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	IFT46	Q9NQC8	304 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	TMEM106B	Q9NUM4	274 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	DMAC2	Q9NW81	257 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	MAT2B	Q9NZL9	334 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	NAGK	Q9UJ70	344 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	ENPP5	Q9UJA9	477 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	POMP	Q9Y244	141 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	SNX24	Q9Y343	169 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	ATP6V1D	Q9Y5K8	247 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	SNX10	Q9Y5X0	201 aa		0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	ZNF608	Q9ULD9	1512 aa	Predicted RBP	0.83	□□□□□ -2.28
CCNL1-223	ENST00000481173	TRAV8-3	A0A0A6YYJ7	113 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	DAPL1	A0PJW8	107 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	ARGFX	A6NJG6	315 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	FAM183A	A6NL82	134 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173		F5H5K5	113 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173		F5H5T6	163 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173		H3BP45	60 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	GOLGA8R	I6L899	631 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	UPK1A	O00322	258 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	TOR1A	O14656	332 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	SLC16A4	O15374	487 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	TOX3	O15405	576 aa	Predicted RBP	0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	SYNGR1	O43759	233 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	ZNF73	O43830	326 aa	Predicted RBP	0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	SCN2B	O60939	215 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	PDCD6	O75340	191 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	DHRS3	O75911	302 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	KCNK2	O95069	426 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	ATP6V1G2	O95670	118 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	GPR75	O95800	540 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	ORM1	P02763	201 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	FBP1	P09467	338 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	SLC35E2B	P0CK96	405 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	LIMS3	P0CW19	117 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	LIMS4	P0CW20	117 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	HIST1H1C	P16403	213 aa	Known RBP	0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	CSRP1	P21291	193 aa	Known RBP	0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	MAGEA2	P43356	314 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	TGM4	P49221	684 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	AKR1C2	P52895	323 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	AQP5	P55064	265 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	OR2B6	P58173	313 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	MAGOH	P61326	146 aa	Known RBP	0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	GTF2B	Q00403	316 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	PMS2P3	Q13401	168 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	MED21	Q13503	144 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	ZNHIT3	Q15649	155 aa	Predicted RBP	0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	MAPK14	Q16539	360 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	CEACAM16	Q2WEN9	425 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	KRTAP21-3	Q3LHN1	58 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	LGALSL	Q3ZCW2	172 aa	Predicted RBP	0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	PDZD11	Q5EBL8	140 aa		0.82	□□□□□ -2.28
CCNL1-223	ENST00000481173	OR10J3	Q5JRS4	329 aa		0.82	□□□□□ -2.28

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms