RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 OR1L3Q8NH93 324 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 FBXL17Q9UF56 701 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 VAX2Q9UIW0 290 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 AP4M1O00189 453 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 TMEM179BQ7Z7N9 219 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 CDRT15L2A8MXV6 281 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 SRSF9Q13242 221 aaKnown RBP eCLIP8.45□□□□□ -1.06
VEGFA-212ENST00000480614 CHRNA10Q9GZZ6 450 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 HCFC1P51610 2035 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 GABRG2P18507 467 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 CXorf67Q86X51 503 aaPredicted RBP8.45□□□□□ -1.06
VEGFA-212ENST00000480614 OR8I2Q8N0Y5 310 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 PTP4A1Q93096 173 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 COL18A1P39060 1754 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 C2CD4DB7Z1M9 353 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 MELTFP08582 738 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 NPY1RP25929 384 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 ASB1Q9Y576 335 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 CD99P14209 185 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 CRYBB2P43320 205 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 PKIAP61925 76 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 FAM78BQ5VT40 261 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 SLC25A33Q9BSK2 321 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 TANC2Q9HCD6 1990 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 DNPH1O43598 174 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 SULT1A1P50225 295 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 OR10A7Q8NGE5 316 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 ASB10Q8WXI3 467 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 MPLP40238 635 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 HLA-DRB3P79483 266 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 TRAF4Q9BUZ4 470 aaPredicted RBP8.45□□□□□ -1.06
VEGFA-212ENST00000480614 VSIG4Q9Y279 399 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 UQCRFS1P47985 274 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 RTP5Q14D33 572 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 C19orf54Q5BKX5 351 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 Q8WTZ3 238 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 ANAPC1Q9H1A4 1944 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 PPP1CCP36873 323 aaKnown RBP8.44□□□□□ -1.06
VEGFA-212ENST00000480614 RPS27P42677 84 aaKnown RBP8.44□□□□□ -1.06
VEGFA-212ENST00000480614 GABRA6Q16445 453 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 FADS6Q8N9I5 356 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 MYOZ3Q8TDC0 251 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 RBM38Q9H0Z9 239 aaKnown RBP8.44□□□□□ -1.06
VEGFA-212ENST00000480614 SMDT1Q9H4I9 107 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 WSB2Q9NYS7 404 aaPredicted RBP8.44□□□□□ -1.06
VEGFA-212ENST00000480614 ZNF256Q9Y2P7 627 aaPredicted RBP8.44□□□□□ -1.06
VEGFA-212ENST00000480614 PCDHGA9Q9Y5G4 932 aaKnown RBP8.44□□□□□ -1.06
VEGFA-212ENST00000480614 SMPD2O60906 423 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 HEXA-AS1Q9H8Q6 139 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 PCBP3P57721 371 aaKnown RBP8.44□□□□□ -1.06
VEGFA-212ENST00000480614 WIPI1Q5MNZ9 446 aaPredicted RBP8.44□□□□□ -1.06
VEGFA-212ENST00000480614 SPNS3Q6ZMD2 512 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 SP6Q3SY56 376 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 BPIFA4PQ86YQ2 179 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 ASB5Q8WWX0 329 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 TSPAN32Q96QS1 320 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 FZR1Q9UM11 496 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 AKR7A2O43488 359 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 ORM2P19652 201 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 COL8A1P27658 744 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 GUCA2AQ02747 115 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 FZD5Q13467 585 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 RRN3P1Q2M238 152 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 TBC1D26Q86UD7 250 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 R3HDM4Q96D70 268 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 COL25A1Q9BXS0 654 aaPredicted RBP8.44□□□□□ -1.06
VEGFA-212ENST00000480614 CLEC5AQ9NY25 188 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 KCNE3Q9Y6H6 103 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 COX7A1P24310 79 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 ACAA2P42765 397 aaKnown RBP8.44□□□□□ -1.06
VEGFA-212ENST00000480614 TNXAQ16473 311 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 MPV17LQ2QL34 196 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 APOBEC4Q8WW27 367 aaKnown RBP8.44□□□□□ -1.06
VEGFA-212ENST00000480614 PRDM7Q9NQW5 492 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 GPR27Q9NS67 375 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 GZMHP20718 246 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 FAM27D1Q5T7N8 215 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 CST9Q5W186 159 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 MRGPRDQ8TDS7 321 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 MARVELD1Q9BSK0 173 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 TMUB1Q9BVT8 246 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 PIPOXQ9P0Z9 390 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 DEFB108AA8MXU0 73 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 SS18L1O75177 396 aaPredicted RBP8.44□□□□□ -1.06
VEGFA-212ENST00000480614 CDS2O95674 445 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 RD3LP0DJH9 198 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 SLC35E3Q7Z769 313 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 MRGPRGQ86SM5 289 aa8.44□□□□□ -1.06
VEGFA-212ENST00000480614 NCOA6Q14686 2063 aaPredicted RBP8.44□□□□□ -1.06
VEGFA-212ENST00000480614 VWA8A3KMH1 1905 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 A0A087X0M5 115 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 A0A1B0GX30 115 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 HOXA6P31267 233 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 FGF8P55075 233 aaPredicted RBP8.43□□□□□ -1.06
VEGFA-212ENST00000480614 HLA-DRB5Q30154 266 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 GBGT1Q8N5D6 347 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 TMEM196Q5HYL7 178 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 RTN4RL1Q86UN2 441 aaPredicted RBP8.43□□□□□ -1.06
VEGFA-212ENST00000480614 TCF20Q9UGU0 1960 aaKnown RBP8.43□□□□□ -1.06
VEGFA-212ENST00000480614 DYNLT3P51808 116 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms