RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 C17orf58Q2M2W7 97 aa12.34□□□□□ -0.43
CDK9-203ENST00000480353 MPV17LQ2QL34 196 aa12.34□□□□□ -0.43
CDK9-203ENST00000480353 AWAT2Q6E213 333 aa12.34□□□□□ -0.43
CDK9-203ENST00000480353 OR13A1Q8NGR1 328 aa12.34□□□□□ -0.43
CDK9-203ENST00000480353 TOMM40LQ969M1 308 aa12.34□□□□□ -0.43
CDK9-203ENST00000480353 MMP28Q9H239 520 aa12.34□□□□□ -0.43
CDK9-203ENST00000480353 NCOR1P1Q9H4R4 102 aa12.34□□□□□ -0.43
CDK9-203ENST00000480353 PSORS1C1Q9UIG5 152 aa12.34□□□□□ -0.43
CDK9-203ENST00000480353 MRPS28Q9Y2Q9 187 aaKnown RBP12.34□□□□□ -0.43
CDK9-203ENST00000480353 PKD1L1Q8TDX9 2849 aa12.33□□□□□ -0.44
CDK9-203ENST00000480353 TMEM30CPA0ZSE6 113 aa12.33□□□□□ -0.44
CDK9-203ENST00000480353 GEMIN2O14893 280 aaKnown RBP12.33□□□□□ -0.44
CDK9-203ENST00000480353 IL1AP01583 271 aa12.33□□□□□ -0.44
CDK9-203ENST00000480353 FSTP19883 344 aa12.33□□□□□ -0.44
CDK9-203ENST00000480353 CD24P25063 80 aa12.33□□□□□ -0.44
CDK9-203ENST00000480353 GDNFP39905 211 aa12.33□□□□□ -0.44
CDK9-203ENST00000480353 GNG10P50151 68 aa12.33□□□□□ -0.44
CDK9-203ENST00000480353 TPTE2P1Q5T6R2 138 aa12.33□□□□□ -0.44
CDK9-203ENST00000480353 RSBN1Q5VWQ0 802 aaPredicted RBP12.33□□□□□ -0.44
CDK9-203ENST00000480353 GLIPR1L1Q6UWM5 242 aa12.33□□□□□ -0.44
CDK9-203ENST00000480353 ASCL4Q6XD76 172 aa12.33□□□□□ -0.44
CDK9-203ENST00000480353 OR10X1Q8NGY0 326 aa12.33□□□□□ -0.44
CDK9-203ENST00000480353 RFESDQ8TAC1 157 aa12.33□□□□□ -0.44
CDK9-203ENST00000480353 PLPPR1Q8TBJ4 325 aa12.33□□□□□ -0.44
CDK9-203ENST00000480353 MYDGFQ969H8 173 aa12.33□□□□□ -0.44
CDK9-203ENST00000480353 MUL1Q969V5 352 aa12.33□□□□□ -0.44
CDK9-203ENST00000480353 KIRREL1Q96J84 757 aa12.33□□□□□ -0.44
CDK9-203ENST00000480353 SLC25A33Q9BSK2 321 aa12.33□□□□□ -0.44
CDK9-203ENST00000480353 MND1Q9BWT6 205 aa12.33□□□□□ -0.44
CDK9-203ENST00000480353 SPACA1Q9HBV2 294 aa12.33□□□□□ -0.44
CDK9-203ENST00000480353 PLCXD1Q9NUJ7 323 aa12.33□□□□□ -0.44
CDK9-203ENST00000480353 OOSP1A8MZH6 123 aa12.32□□□□□ -0.44
CDK9-203ENST00000480353 MCRIP1C9JLW8 97 aa12.32□□□□□ -0.44
CDK9-203ENST00000480353 PTGES3LE9PB15 166 aa12.32□□□□□ -0.44
CDK9-203ENST00000480353 WIPF1O43516 503 aa12.32□□□□□ -0.44
CDK9-203ENST00000480353 IGLV1-47P01700 117 aa12.32□□□□□ -0.44
CDK9-203ENST00000480353 IGHV3-7P01780 117 aa12.32□□□□□ -0.44
CDK9-203ENST00000480353 FAM106CPP0CH98 169 aa12.32□□□□□ -0.44
CDK9-203ENST00000480353 IGFBP3P17936 291 aaPredicted RBP12.32□□□□□ -0.44
CDK9-203ENST00000480353 GZMHP20718 246 aa12.32□□□□□ -0.44
CDK9-203ENST00000480353 DOC2BQ14184 412 aa12.32□□□□□ -0.44
CDK9-203ENST00000480353 HES1Q14469 280 aa12.32□□□□□ -0.44
CDK9-203ENST00000480353 NSUN5P1Q3KNT7 163 aa12.32□□□□□ -0.44
CDK9-203ENST00000480353 NHLRC3Q5JS37 347 aa12.32□□□□□ -0.44
CDK9-203ENST00000480353 Q8NFD4 153 aa12.32□□□□□ -0.44
CDK9-203ENST00000480353 OR10A7Q8NGE5 316 aa12.32□□□□□ -0.44
CDK9-203ENST00000480353 PGLYRP3Q96LB9 341 aa12.32□□□□□ -0.44
CDK9-203ENST00000480353 LIN7BQ9HAP6 207 aa12.32□□□□□ -0.44
CDK9-203ENST00000480353 RAB9BQ9NP90 201 aa12.32□□□□□ -0.44
CDK9-203ENST00000480353 TRAV8-7A0A075B6U6 113 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 A0A087X0M5 115 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 TRAV39A0A0B4J263 110 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 A0A1B0GX30 115 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 J3QR06 171 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 AIPO00170 330 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 GPX5O75715 221 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 CRTAPO75718 401 aaPredicted RBP12.31□□□□□ -0.44
CDK9-203ENST00000480353 SSTR5P35346 364 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 BLCAPP62952 87 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 GABPB1Q06547 395 aaPredicted RBP12.31□□□□□ -0.44
CDK9-203ENST00000480353 MADCAM1Q13477 382 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 C9orf152Q5JTZ5 239 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 NANOGP1Q8N7R0 232 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 NKAIN3Q8N8D7 197 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 CCDC107Q8WV48 283 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 TFAP2CQ92754 450 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 LEAP2Q969E1 77 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 ARL11Q969Q4 196 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 MRPS24Q96EL2 167 aaKnown RBP12.31□□□□□ -0.44
CDK9-203ENST00000480353 DERL3Q96Q80 235 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 VCX3BQ9H321 246 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 IFT22Q9H7X7 185 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 TRAPPC2LQ9UL33 140 aa12.31□□□□□ -0.44
CDK9-203ENST00000480353 TRBV5-7A0A0A0MS05 114 aa12.3□□□□□ -0.44
CDK9-203ENST00000480353 MAGEA13PA6NCF6 341 aa12.3□□□□□ -0.44
CDK9-203ENST00000480353 FAM90A22PA8MWA6 464 aa12.3□□□□□ -0.44
CDK9-203ENST00000480353 OR2F2O95006 317 aa12.3□□□□□ -0.44
CDK9-203ENST00000480353 CDK1P06493 297 aa12.3□□□□□ -0.44
CDK9-203ENST00000480353 RPS11P62280 158 aaKnown RBP eCLIP12.3□□□□□ -0.44
CDK9-203ENST00000480353 PAX5Q02548 391 aa12.3□□□□□ -0.44
CDK9-203ENST00000480353 EMX1Q04741 257 aaPredicted RBP12.3□□□□□ -0.44
CDK9-203ENST00000480353 MED22Q15528 200 aa12.3□□□□□ -0.44
CDK9-203ENST00000480353 ABCA11PQ4W5N1 156 aa12.3□□□□□ -0.44
CDK9-203ENST00000480353 SLC16A12Q6ZSM3 486 aa12.3□□□□□ -0.44
CDK9-203ENST00000480353 CENPVQ7Z7K6 275 aaPredicted RBP12.3□□□□□ -0.44
CDK9-203ENST00000480353 CDH26Q8IXH8 852 aa12.3□□□□□ -0.44
CDK9-203ENST00000480353 LYG1Q8N1E2 194 aa12.3□□□□□ -0.44
CDK9-203ENST00000480353 Q8N2B8 174 aa12.3□□□□□ -0.44
CDK9-203ENST00000480353 MS4A15Q8N5U1 240 aa12.3□□□□□ -0.44
CDK9-203ENST00000480353 ZNF485Q8NCK3 441 aa12.3□□□□□ -0.44
CDK9-203ENST00000480353 RBM14Q96PK6 669 aaKnown RBP12.3□□□□□ -0.44
CDK9-203ENST00000480353 SELENOIQ9C0D9 397 aa12.3□□□□□ -0.44
CDK9-203ENST00000480353 SERTAD4Q9NUC0 356 aa12.3□□□□□ -0.44
CDK9-203ENST00000480353 ETAA1Q9NY74 926 aa12.3□□□□□ -0.44
CDK9-203ENST00000480353 PSG11Q9UQ72 335 aa12.3□□□□□ -0.44
CDK9-203ENST00000480353 WNK1Q9H4A3 2382 aa12.3□□□□□ -0.44
CDK9-203ENST00000480353 A0A1W2PP11 408 aa12.29□□□□□ -0.44
CDK9-203ENST00000480353 M0QZK8 103 aa12.29□□□□□ -0.44
CDK9-203ENST00000480353 SDCBPO00560 298 aaPredicted RBP12.29□□□□□ -0.44
CDK9-203ENST00000480353 KCNAB3O43448 404 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms