RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 NCMAPQ5T1S8 102 aa5.4□□□□□ -1.54
PRPF4B-205ENST00000480058 PDPNQ86YL7 162 aa5.4□□□□□ -1.54
PRPF4B-205ENST00000480058 DOLPP1Q86YN1 238 aa5.4□□□□□ -1.54
PRPF4B-205ENST00000480058 OR4D11Q8NGI4 311 aa5.4□□□□□ -1.54
PRPF4B-205ENST00000480058 TPPP3Q9BW30 176 aa5.4□□□□□ -1.54
PRPF4B-205ENST00000480058 RPH3ALQ9UNE2 315 aa5.4□□□□□ -1.54
PRPF4B-205ENST00000480058 AMMECR1Q9Y4X0 333 aaPredicted RBP5.4□□□□□ -1.54
PRPF4B-205ENST00000480058 COL22A1Q8NFW1 1626 aaPredicted RBP5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 NCOR1O75376 2440 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 NRG2O14511 850 aaPredicted RBP5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 HPRT1P00492 218 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 GFERP55789 205 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 FMODQ06828 376 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 SMAD4Q13485 552 aaKnown RBP5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 TWIST1Q15672 202 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 KCNMB1Q16558 191 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 DHRS11Q6UWP2 260 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 FAM216AQ8WUB2 273 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 HIST1H2BAQ96A08 127 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 TRMT61AQ96FX7 289 aaKnown RBP5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 THOC3Q96J01 351 aaKnown RBP5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 TP53RKQ96S44 253 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 CISD1Q9NZ45 108 aaKnown RBP5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 PIPOXQ9P0Z9 390 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 ZFP30Q9Y2G7 519 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 SIT1Q9Y3P8 196 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 C4AP0C0L4 1744 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 C4BP0C0L5 1744 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 FBLL1A6NHQ2 334 aaKnown RBP5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 HSPB6O14558 160 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 MGST3O14880 152 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 UPK3AO75631 287 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 ZIC2O95409 532 aaPredicted RBP5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 ITGBL1O95965 494 aaPredicted RBP5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 SMIM17P0DL12 118 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 OR1D5P58170 312 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 YBX1P67809 324 aaKnown RBP5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 OR1C1Q15619 314 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 FAM209BQ5JX69 171 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 RNASEKQ6P5S7 137 aaKnown RBP5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 INO80CQ6PI98 192 aaPredicted RBP5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 ZNF596Q8TC21 504 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 AQP3Q92482 292 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 R3HDM4Q96D70 268 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 GPA33Q99795 319 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 SOSTQ9BQB4 213 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 LRFN3Q9BTN0 628 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 GP6Q9HCN6 339 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 IFNL4K9M1U5 179 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 SOCS1O15524 211 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 SP1P08047 785 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 ACAA1P09110 424 aaPredicted RBP5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 CEACAM6P40199 344 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 RPL24P83731 157 aaKnown RBP5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 GAMTQ14353 236 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 ACER2Q5QJU3 275 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 TMEM215Q68D42 235 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 TBC1D26Q86UD7 250 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 ZNF383Q8NA42 475 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 OR1P1Q8NH06 330 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 ISOC2Q96AB3 205 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 CXXC4Q9H2H0 198 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 SLC25A22Q9H936 323 aa5.4□□□□□ -1.55
PRPF4B-205ENST00000480058 DIRC3C9JPN6 131 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 P01737 135 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 P2RY4P51582 365 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 NXPH1P58417 271 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 RPS20P60866 119 aaKnown RBP5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 IGLV3-21P80748 117 aaPredicted RBP5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 LTC4SQ16873 150 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 MRPL52Q86TS9 123 aaKnown RBP5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 LDLRAD3Q86YD5 345 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 TM4SF19Q96DZ7 209 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 SMIM12Q96EX1 92 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 TBX15Q96SF7 602 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 TNRC6CQ9HCJ0 1690 aaKnown RBP5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 COL16A1Q07092 1604 aaPredicted RBP5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 MKRN2OSH3BPM6 223 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 SLC25A5P05141 298 aaKnown RBP5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 G6PCP35575 357 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 PRRX1P54821 245 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 NRN1LQ496H8 165 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 C10orf111Q8N326 155 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 TMEM45BQ96B21 275 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 LRRC61Q9BV99 259 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 PRO1933Q9H354 126 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 PLSCR2Q9NRY7 297 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 WNT16Q9UBV4 365 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 SLC31A2O15432 143 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 TMIGD3P0DMS9 266 aaPredicted RBP5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 MC5RP33032 325 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 OR3A1P47881 315 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 RND3P61587 244 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 ACSF3Q4G176 576 aaPredicted RBP5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 PATE1Q8WXA2 126 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 H1FXQ92522 213 aaKnown RBP5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 CTHRC1Q96CG8 243 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 CLN8Q9UBY8 286 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 FUT9Q9Y231 359 aa5.39□□□□□ -1.55
PRPF4B-205ENST00000480058 ATP23Q9Y6H3 246 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms