RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 TRBV6-7A0A0A0MS04 114 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 FAM172BPA6NC97 362 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 CRYM-AS1A6NIL9 109 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.26□□□□□ -0.93
VTI1A-204ENST00000480057 M0R233 179 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 WNT9BO14905 357 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 CD8AP01732 235 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 SCTP09683 121 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 RPS2P15880 293 aaKnown RBP9.26□□□□□ -0.93
VTI1A-204ENST00000480057 AADACP22760 399 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 APOBEC3AP31941 199 aaPredicted RBP9.26□□□□□ -0.93
VTI1A-204ENST00000480057 PRDX2P32119 198 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 SERPINF1P36955 418 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 NKX2-5P52952 324 aaPredicted RBP9.26□□□□□ -0.93
VTI1A-204ENST00000480057 RND3P61587 244 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 FGL1Q08830 312 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 C4orf17Q53FE4 359 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 ADAM5Q6NVV9 412 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 CLEC18BQ6UXF7 455 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 MOGAT3Q86VF5 341 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 DMRTC2Q8IXT2 367 aaPredicted RBP9.26□□□□□ -0.93
VTI1A-204ENST00000480057 GALNT14Q96FL9 552 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 PLPPR2Q96GM1 343 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 KRTAP3-3Q9BYR6 98 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 KRTAP3-2Q9BYR7 98 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 EGLN1Q9GZT9 426 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 LIME1Q9H400 295 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 KCNIP1Q9NZI2 227 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 OR14J1Q9UGF5 321 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 FBXO9Q9UK97 447 aaPredicted RBP9.26□□□□□ -0.93
VTI1A-204ENST00000480057 TRAPPC2LQ9UL33 140 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 KCNIP3Q9Y2W7 256 aa9.26□□□□□ -0.93
VTI1A-204ENST00000480057 ATMQ13315 3056 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 PIGBOS1A0A0B4J2F0 54 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 IGHV3-64DA0A0J9YX35 117 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.25□□□□□ -0.93
VTI1A-204ENST00000480057 OOEPA6NGQ2 149 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 RFPL4AA6NLU0 287 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 B9A039 149 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 E7EQL1 145 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 RFPL4AL1F8VTS6 287 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 G3V3Q6 166 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 PSPNO60542 156 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 IFNA2P01563 188 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 WNT2P09544 360 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 PSG2P11465 335 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 IRF2P14316 349 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 EGR1P18146 543 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 OR3A1P47881 315 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 H2BFSP57053 126 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 SUPT4H1P63272 117 aaKnown RBP9.25□□□□□ -0.93
VTI1A-204ENST00000480057 CYCSP99999 105 aaKnown RBP9.25□□□□□ -0.93
VTI1A-204ENST00000480057 COL10A1Q03692 680 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 BAMBIQ13145 260 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 HERPUD1Q15011 391 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 C2orf68Q2NKX9 166 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 ABCA11PQ4W5N1 156 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 IGSF11Q5DX21 431 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 LY6G6FQ5SQ64 297 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 C6orf183Q5T699 404 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 C20orf204Q6ZNR8 217 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 KCTD9Q7L273 389 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 H1FOOQ8IZA3 346 aaPredicted RBP9.25□□□□□ -0.93
VTI1A-204ENST00000480057 C9orf62Q8N4C0 152 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 CD177Q8N6Q3 437 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 UXS1Q8NBZ7 420 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 OR10J5Q8NHC4 309 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 FAM216AQ8WUB2 273 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 SNX22Q96L94 193 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 TMEM204Q9BSN7 226 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 SUCNR1Q9BXA5 334 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 TOLLIPQ9H0E2 274 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 MS4A5Q9H3V2 200 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 GCM1Q9NP62 436 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 DNAJB11Q9UBS4 358 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 RNF115Q9Y4L5 304 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 SPENQ96T58 3664 aaKnown RBP9.25□□□□□ -0.93
VTI1A-204ENST00000480057 BOD1L1Q8NFC6 3051 aa9.25□□□□□ -0.93
VTI1A-204ENST00000480057 CHD3Q12873 2000 aaKnown RBP9.24□□□□□ -0.93
VTI1A-204ENST00000480057 MAP1BP46821 2468 aaKnown RBP9.24□□□□□ -0.93
VTI1A-204ENST00000480057 RP1L1Q8IWN7 2480 aaPredicted RBP9.24□□□□□ -0.93
VTI1A-204ENST00000480057 IGKV1D-17A0A075B6S4 117 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 IGKV1-6A0A0C4DH72 117 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 TEX13DA0A0J9YY54 714 aaPredicted RBP9.24□□□□□ -0.93
VTI1A-204ENST00000480057 NKX2-6A6NCS4 301 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 TUBAL3A6NHL2 446 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 LRRC30A6NM36 301 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 HMSDA8MTL9 139 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 SMLR1H3BR10 107 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 MGST3O14880 152 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 RGS13O14921 159 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 ZNF737O75373 536 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 B3GALNT1O75752 331 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 MUC1P15941 1255 aaPredicted RBP9.24□□□□□ -0.93
VTI1A-204ENST00000480057 RCC1P18754 421 aaPredicted RBP9.24□□□□□ -0.93
VTI1A-204ENST00000480057 C4BPBP20851 252 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 RBMXP38159 391 aaKnown RBP9.24□□□□□ -0.93
VTI1A-204ENST00000480057 PIGPP57054 158 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 GMFBP60983 142 aa9.24□□□□□ -0.93
VTI1A-204ENST00000480057 SRPXP78539 464 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms