RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 MRPS7Q9Y2R9 242 aaKnown RBP4.3□□□□□ -1.72
COMMD3-212ENST00000479958 FAM215AQ9Y5M1 114 aa4.3□□□□□ -1.72
COMMD3-212ENST00000479958 SPENQ96T58 3664 aaKnown RBP4.3□□□□□ -1.72
COMMD3-212ENST00000479958 MYO7BQ6PIF6 2116 aa4.3□□□□□ -1.72
COMMD3-212ENST00000479958 ZZEF1O43149 2961 aa4.3□□□□□ -1.72
COMMD3-212ENST00000479958 PIEZO1Q92508 2521 aa4.3□□□□□ -1.72
COMMD3-212ENST00000479958 MPTX1A8MV57 137 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 SLC17A2O00624 439 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 EEF1E1O43324 174 aaKnown RBP4.29□□□□□ -1.72
COMMD3-212ENST00000479958 TNFSF13O75888 250 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 APOA1P02647 267 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 CD3GP09693 182 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 DANCRP0C864 163 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 CCNOP22674 350 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 CDK2P24941 298 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 POU3F4P49335 361 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 SRP9P49458 86 aaKnown RBP4.29□□□□□ -1.72
COMMD3-212ENST00000479958 PCBD1P61457 104 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 ZNF415Q09FC8 603 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 SCRN3Q0VDG4 424 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 UBE2V2Q15819 145 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 CARTPTQ16568 116 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 RGS21Q2M5E4 152 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 TRIM16LQ309B1 348 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 MOGAT2Q3SYC2 334 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 TCTEX1D4Q5JR98 221 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 UBE2NLQ5JXB2 153 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 C1orf100Q5SVJ3 147 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 LRRC28Q86X40 367 aaPredicted RBP4.29□□□□□ -1.72
COMMD3-212ENST00000479958 Q8N402 240 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 JAGN1Q8N5M9 183 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 WDR31Q8NA23 367 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 SYNPRQ8TBG9 265 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 FAM3DQ96BQ1 224 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 CMBLQ96DG6 245 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 ZNF486Q96H40 463 aaPredicted RBP4.29□□□□□ -1.72
COMMD3-212ENST00000479958 REEP6Q96HR9 211 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 RNF170Q96K19 258 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 ZFP3Q96NJ6 502 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 FGF23Q9GZV9 251 aaPredicted RBP4.29□□□□□ -1.72
COMMD3-212ENST00000479958 SHARPINQ9H0F6 387 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 HDHD2Q9H0R4 259 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 SLITRK2Q9H156 845 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 OR51B6Q9H340 312 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 AUNIPQ9H7T9 357 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 GPR173Q9NS66 373 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 MRPL15Q9P015 296 aaKnown RBP4.29□□□□□ -1.72
COMMD3-212ENST00000479958 ABRACLQ9P1F3 81 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 ELF5Q9UKW6 265 aaPredicted RBP4.29□□□□□ -1.72
COMMD3-212ENST00000479958 PIGLQ9Y2B2 252 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 STARD10Q9Y365 291 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 V9GYS6 101 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 TLN1Q9Y490 2541 aaKnown RBP4.29□□□□□ -1.72
COMMD3-212ENST00000479958 INTS1Q8N201 2190 aaKnown RBP4.29□□□□□ -1.72
COMMD3-212ENST00000479958 RP1L1Q8IWN7 2480 aaPredicted RBP4.29□□□□□ -1.72
COMMD3-212ENST00000479958 IGKV1-27A0A075B6S5 117 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 A0A0A6YYD4 124 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 A0A0U1RQV5 110 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 hCG_1807616A0A1W2PRN6 198 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 CIB4A0PJX0 185 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 C5orf49A4QMS7 147 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 RRP8O43159 456 aaKnown RBP4.29□□□□□ -1.72
COMMD3-212ENST00000479958 RAD51DO75771 328 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 FARS2O95363 451 aaKnown RBP4.29□□□□□ -1.72
COMMD3-212ENST00000479958 IGHV2-70P01814 119 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 HLA-DQB1P01920 261 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 CD2P06729 351 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 FCER2P06734 321 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 OCMP0CE72 109 aaPredicted RBP4.29□□□□□ -1.72
COMMD3-212ENST00000479958 CALCBP10092 127 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 CFL1P23528 166 aaKnown RBP4.29□□□□□ -1.72
COMMD3-212ENST00000479958 STOMP27105 288 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 HTR2CP28335 458 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 RBMXP38159 391 aaKnown RBP4.29□□□□□ -1.72
COMMD3-212ENST00000479958 OR3A4PP47883 348 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 PITPNBP48739 271 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 TDGF1P3P51864 188 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 QRFPP83859 136 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 FAM3AP98173 230 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 CD300CQ08708 224 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 ECH1Q13011 328 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 UNC119Q13432 240 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 GABRA6Q16445 453 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 SLC36A2Q495M3 483 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 TMEM255AQ5JRV8 349 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 C1orf185Q5T7R7 199 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 GLT8D1Q68CQ7 371 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 MZT2BQ6NZ67 158 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 RPUSD3Q6P087 351 aaKnown RBP4.29□□□□□ -1.72
COMMD3-212ENST00000479958 ZNF343Q6P1L6 599 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 DRAM2Q6UX65 266 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 Q6ZSR3 168 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 NRARPQ7Z6K4 114 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 GDPD1Q8N9F7 314 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 THAP8Q8NA92 274 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 OR5D18Q8NGL1 313 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 OR10K1Q8NGX5 313 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 SSC4DQ8WTU2 575 aa4.29□□□□□ -1.72
COMMD3-212ENST00000479958 SNRNP27Q8WVK2 155 aaKnown RBP4.29□□□□□ -1.72
COMMD3-212ENST00000479958 YIPF5Q969M3 257 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms